RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A MDH1P17505 334 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
EFG1YGR271C-A YCR007CP25354 239 aa3.18□□□□□ -1.9
EFG1YGR271C-A PUP3P25451 205 aaKnown RBP3.18□□□□□ -1.9
EFG1YGR271C-A POT1P27796 417 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
EFG1YGR271C-A YBL055CP34220 418 aaPredicted RBP3.18□□□□□ -1.9
EFG1YGR271C-A UBP11P36026 717 aa3.18□□□□□ -1.9
EFG1YGR271C-A TUL1P36096 758 aa3.18□□□□□ -1.9
EFG1YGR271C-A LAS1P36146 502 aaPredicted RBP3.18□□□□□ -1.9
EFG1YGR271C-A KTR3P38130 404 aaPredicted RBP3.18□□□□□ -1.9
EFG1YGR271C-A SMF1P38925 575 aa3.18□□□□□ -1.9
EFG1YGR271C-A ZIM17P42844 174 aa3.18□□□□□ -1.9
EFG1YGR271C-A DRN1P53255 507 aaKnown RBP3.18□□□□□ -1.9
EFG1YGR271C-A RLI1Q03195 608 aaKnown RBP3.18□□□□□ -1.9
EFG1YGR271C-A NGL3Q03210 505 aa3.18□□□□□ -1.9
EFG1YGR271C-A HEL2Q05580 639 aaKnown RBP3.18□□□□□ -1.9
EFG1YGR271C-A YOR365CQ08844 703 aa3.18□□□□□ -1.9
EFG1YGR271C-A RIM20Q12033 661 aa3.18□□□□□ -1.9
EFG1YGR271C-A SGT2Q12118 346 aaKnown RBP3.18□□□□□ -1.9
EFG1YGR271C-A RRP36Q12481 300 aaPredicted RBP3.18□□□□□ -1.9
EFG1YGR271C-A YOL159C-AQ3E769 90 aa3.18□□□□□ -1.9
EFG1YGR271C-A YER078W-AQ3E7A2 54 aa3.18□□□□□ -1.9
EFG1YGR271C-A YRF1-4O13559 1382 aa3.17□□□□□ -1.9
EFG1YGR271C-A CAR1P00812 333 aaKnown RBP3.17□□□□□ -1.9
EFG1YGR271C-A VMA16P23968 213 aa3.17□□□□□ -1.9
EFG1YGR271C-A POL4P25615 582 aa3.17□□□□□ -1.9
EFG1YGR271C-A HXT1P32465 570 aa3.17□□□□□ -1.9
EFG1YGR271C-A IME2P32581 645 aa3.17□□□□□ -1.9
EFG1YGR271C-A TFB1P32776 642 aa3.17□□□□□ -1.9
EFG1YGR271C-A GYP6P32806 458 aa3.17□□□□□ -1.9
EFG1YGR271C-A RIB7P33312 244 aa3.17□□□□□ -1.9
EFG1YGR271C-A YKL023WP36103 277 aaKnown RBP3.17□□□□□ -1.9
EFG1YGR271C-A SRO77P38163 1010 aa3.17□□□□□ -1.9
EFG1YGR271C-A RFS1P38234 210 aaKnown RBP3.17□□□□□ -1.9
EFG1YGR271C-A YEL057CP39983 233 aa3.17□□□□□ -1.9
EFG1YGR271C-A MET28P40573 187 aa3.17□□□□□ -1.9
EFG1YGR271C-A MGR3Q04472 501 aa3.17□□□□□ -1.9
EFG1YGR271C-A RRP12Q12754 1228 aaKnown RBP3.17□□□□□ -1.9
EFG1YGR271C-A DFR1P07807 211 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
EFG1YGR271C-A CPR2P23285 205 aa3.16□□□□□ -1.9
EFG1YGR271C-A YCR051WP25631 222 aa3.16□□□□□ -1.9
EFG1YGR271C-A URA7P28274 579 aaKnown RBP3.16□□□□□ -1.9
EFG1YGR271C-A MSP1P28737 362 aa3.16□□□□□ -1.9
EFG1YGR271C-A SSE1P32589 693 aaKnown RBP3.16□□□□□ -1.9
EFG1YGR271C-A EBP2P36049 427 aaKnown RBP3.16□□□□□ -1.9
EFG1YGR271C-A REG2P38232 338 aa3.16□□□□□ -1.9
EFG1YGR271C-A SIF2P38262 535 aa3.16□□□□□ -1.9
EFG1YGR271C-A YHR210CP38893 341 aa3.16□□□□□ -1.9
EFG1YGR271C-A HAT2P39984 401 aa3.16□□□□□ -1.9
EFG1YGR271C-A ALG8P40351 577 aa3.16□□□□□ -1.9
EFG1YGR271C-A SCD6P45978 349 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
EFG1YGR271C-A SNG1P46950 547 aa3.16□□□□□ -1.9
EFG1YGR271C-A YGR066CP53242 292 aa3.16□□□□□ -1.9
EFG1YGR271C-A BUD32P53323 261 aa3.16□□□□□ -1.9
EFG1YGR271C-A TOF1P53840 1238 aa3.16□□□□□ -1.9
EFG1YGR271C-A BNI5P53890 448 aaKnown RBP3.16□□□□□ -1.9
EFG1YGR271C-A ERV25P54837 211 aaKnown RBP3.16□□□□□ -1.9
EFG1YGR271C-A SPE3Q12074 293 aaKnown RBP3.16□□□□□ -1.9
EFG1YGR271C-A YJR112W-AQ3E743 109 aa3.16□□□□□ -1.9
EFG1YGR271C-A SUC2P00724 532 aa3.15□□□□□ -1.91
EFG1YGR271C-A KAR3P17119 729 aa3.15□□□□□ -1.91
EFG1YGR271C-A DAL80P26343 269 aa3.15□□□□□ -1.91
EFG1YGR271C-A PAP1P29468 568 aaKnown RBP3.15□□□□□ -1.91
EFG1YGR271C-A NIP1P32497 812 aaKnown RBP3.15□□□□□ -1.91
EFG1YGR271C-A SPR1P32603 445 aa3.15□□□□□ -1.91
EFG1YGR271C-A YEL043WP32618 956 aa3.15□□□□□ -1.91
EFG1YGR271C-A DAD2P36162 133 aa3.15□□□□□ -1.91
EFG1YGR271C-A CST26P38226 397 aa3.15□□□□□ -1.91
EFG1YGR271C-A VID24P38263 362 aa3.15□□□□□ -1.91
EFG1YGR271C-A OTU2P38747 307 aaKnown RBP3.15□□□□□ -1.91
EFG1YGR271C-A YHR131CP38835 850 aa3.15□□□□□ -1.91
EFG1YGR271C-A SHO1P40073 367 aa3.15□□□□□ -1.91
EFG1YGR271C-A FAR3P46671 204 aa3.15□□□□□ -1.91
EFG1YGR271C-A TCB2P48231 1178 aa3.15□□□□□ -1.91
EFG1YGR271C-A LCL3P53153 274 aa3.15□□□□□ -1.91
EFG1YGR271C-A SHR3Q02774 210 aa3.15□□□□□ -1.91
EFG1YGR271C-A SLD5Q03406 294 aa3.15□□□□□ -1.91
EFG1YGR271C-A RNH1Q04740 348 aa3.15□□□□□ -1.91
EFG1YGR271C-A MRPL51Q06090 140 aaPredicted RBP3.15□□□□□ -1.91
EFG1YGR271C-A LUC7Q07508 261 aaPredicted RBP3.15□□□□□ -1.91
EFG1YGR271C-A GPM3Q12326 303 aa3.15□□□□□ -1.91
EFG1YGR271C-A CTF3Q12748 733 aa3.15□□□□□ -1.91
EFG1YGR271C-A QCR6P00127 147 aa3.14□□□□□ -1.91
EFG1YGR271C-A LPD1P09624 499 aaKnown RBP3.14□□□□□ -1.91
EFG1YGR271C-A SPT15P13393 240 aaKnown RBP3.14□□□□□ -1.91
EFG1YGR271C-A KGD1P20967 1014 aaKnown RBP3.14□□□□□ -1.91
EFG1YGR271C-A PHO84P25297 587 aaKnown RBP3.14□□□□□ -1.91
EFG1YGR271C-A BOS1P25385 244 aa3.14□□□□□ -1.91
EFG1YGR271C-A FRE1P32791 686 aa3.14□□□□□ -1.91
EFG1YGR271C-A HEL1P36113 551 aa3.14□□□□□ -1.91
EFG1YGR271C-A YHR054CP38780 354 aa3.14□□□□□ -1.91
EFG1YGR271C-A EFM4P40516 257 aa3.14□□□□□ -1.91
EFG1YGR271C-A NAS2P40555 220 aa3.14□□□□□ -1.91
EFG1YGR271C-A LYS4P49367 693 aaPredicted RBP3.14□□□□□ -1.91
EFG1YGR271C-A YGR127WP53275 312 aa3.14□□□□□ -1.91
EFG1YGR271C-A YNR068CP53754 272 aa3.14□□□□□ -1.91
EFG1YGR271C-A ALF1P53904 254 aa3.14□□□□□ -1.91
EFG1YGR271C-A ROY1Q04847 553 aa3.14□□□□□ -1.91
EFG1YGR271C-A YEH1Q07804 573 aa3.14□□□□□ -1.91
EFG1YGR271C-A RTC5Q12108 567 aaKnown RBP3.14□□□□□ -1.91
EFG1YGR271C-A RPN5Q12250 445 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms