RNA–Protein interactions for RNA: YGL087C

MMS2, Transcript of Ubiquitin-conjugating enzyme variant, yeast

Gene MMS2, Length 414 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MMS2	YGL087C	RTT101	P47050	842 aa		5.03	□□□□□ -1.6
MMS2	YGL087C	COS5	P47187	383 aa		5.03	□□□□□ -1.6
MMS2	YGL087C	ERB1	Q04660	807 aa	Known RBP	5.03	□□□□□ -1.6
MMS2	YGL087C	COS7	Q07788	383 aa		5.03	□□□□□ -1.6
MMS2	YGL087C	SIL1	Q08199	421 aa		5.03	□□□□□ -1.6
MMS2	YGL087C	NDD1	Q08887	554 aa		5.03	□□□□□ -1.6
MMS2	YGL087C	CYB2	P00175	591 aa		5.02	□□□□□ -1.61
MMS2	YGL087C	SPC110	P32380	944 aa		5.02	□□□□□ -1.61
MMS2	YGL087C	GCS1	P35197	352 aa		5.02	□□□□□ -1.61
MMS2	YGL087C	ARA1	P38115	344 aa		5.02	□□□□□ -1.61
MMS2	YGL087C	VHC1	P38329	1120 aa		5.02	□□□□□ -1.61
MMS2	YGL087C	YGL138C	P53122	345 aa		5.02	□□□□□ -1.61
MMS2	YGL087C	CRZ1	P53968	678 aa		5.02	□□□□□ -1.61
MMS2	YGL087C	SKO1	Q02100	647 aa		5.02	□□□□□ -1.61
MMS2	YGL087C	HSP42	Q12329	375 aa		5.02	□□□□□ -1.61
MMS2	YGL087C	RPL15A	P05748	204 aa	Known RBP	5.01	□□□□□ -1.61
MMS2	YGL087C	YML002W	P0CF17	737 aa		5.01	□□□□□ -1.61
MMS2	YGL087C	URA7	P28274	579 aa	Known RBP	5.01	□□□□□ -1.61
MMS2	YGL087C	PRP21	P32524	280 aa	Predicted RBP	5.01	□□□□□ -1.61
MMS2	YGL087C	VMA8	P32610	256 aa	Known RBP	5.01	□□□□□ -1.61
MMS2	YGL087C	HAT2	P39984	401 aa		5.01	□□□□□ -1.61
MMS2	YGL087C	GWT1	P47026	490 aa		5.01	□□□□□ -1.61
MMS2	YGL087C	YML6	P51998	286 aa		5.01	□□□□□ -1.61
MMS2	YGL087C	YMR317W	Q04893	1140 aa		5.01	□□□□□ -1.61
MMS2	YGL087C	ISA2	Q12425	185 aa		5.01	□□□□□ -1.61
MMS2	YGL087C	AFI1	Q99222	893 aa		5.01	□□□□□ -1.61
MMS2	YGL087C	ATR1	P13090	542 aa		5	□□□□□ -1.61
MMS2	YGL087C	CLB1	P24868	471 aa		5	□□□□□ -1.61
MMS2	YGL087C	SRP72	P38688	640 aa	Known RBP	5	□□□□□ -1.61
MMS2	YGL087C	CCT2	P39076	527 aa	Known RBP	5	□□□□□ -1.61
MMS2	YGL087C	DHH1	P39517	506 aa	Known RBP	5	□□□□□ -1.61
MMS2	YGL087C	SHO1	P40073	367 aa		5	□□□□□ -1.61
MMS2	YGL087C	ALG8	P40351	577 aa		5	□□□□□ -1.61
MMS2	YGL087C	OGG1	P53397	376 aa	Predicted RBP	5	□□□□□ -1.61
MMS2	YGL087C	HSP31	Q04432	237 aa		5	□□□□□ -1.61
MMS2	YGL087C	YLR345W	Q06137	509 aa		5	□□□□□ -1.61
MMS2	YGL087C	YCR022C	P25620	114 aa		4.99	□□□□□ -1.61
MMS2	YGL087C	KRE2	P27809	442 aa		4.99	□□□□□ -1.61
MMS2	YGL087C	LOS1	P33418	1100 aa	Predicted RBP	4.99	□□□□□ -1.61
MMS2	YGL087C	PXA2	P34230	853 aa		4.99	□□□□□ -1.61
MMS2	YGL087C	RSM22	P36056	628 aa		4.99	□□□□□ -1.61
MMS2	YGL087C	MDM31	P38880	579 aa		4.99	□□□□□ -1.61
MMS2	YGL087C	CAK1	P43568	368 aa	Predicted RBP	4.99	□□□□□ -1.61
MMS2	YGL087C	DSL1	P53847	754 aa		4.99	□□□□□ -1.61
MMS2	YGL087C	KTR5	P53966	522 aa	Predicted RBP	4.99	□□□□□ -1.61
MMS2	YGL087C	VAM3	Q12241	283 aa		4.99	□□□□□ -1.61
MMS2	YGL087C	SMC6	Q12749	1114 aa		4.99	□□□□□ -1.61
MMS2	YGL087C	YLR278C	Q05854	1341 aa		4.98	□□□□□ -1.61
MMS2	YGL087C	RPL20A	P0CX23	172 aa	Known RBP	4.98	□□□□□ -1.61
MMS2	YGL087C	RPL20B	P0CX24	172 aa	Predicted RBP	4.98	□□□□□ -1.61
MMS2	YGL087C	SEC63	P14906	663 aa		4.98	□□□□□ -1.61
MMS2	YGL087C	SIN4	P32259	974 aa		4.98	□□□□□ -1.61
MMS2	YGL087C	FRE2	P36033	711 aa		4.98	□□□□□ -1.61
MMS2	YGL087C	PMU1	P36069	295 aa		4.98	□□□□□ -1.61
MMS2	YGL087C	MTC4	P38335	694 aa	Known RBP	4.98	□□□□□ -1.61
MMS2	YGL087C	RPH1	P39956	796 aa		4.98	□□□□□ -1.61
MMS2	YGL087C	RPR2	P40571	144 aa		4.98	□□□□□ -1.61
MMS2	YGL087C	MEP2	P41948	499 aa		4.98	□□□□□ -1.61
MMS2	YGL087C	PNG1	Q02890	363 aa		4.98	□□□□□ -1.61
MMS2	YGL087C	RKM1	Q08961	583 aa	Predicted RBP	4.98	□□□□□ -1.61
MMS2	YGL087C	AYT1	Q12226	474 aa		4.98	□□□□□ -1.61
MMS2	YGL087C	SET6	Q12529	373 aa		4.98	□□□□□ -1.61
MMS2	YGL087C	SRV2	P17555	526 aa	Known RBP	4.97	□□□□□ -1.61
MMS2	YGL087C	YUR1	P26725	428 aa		4.97	□□□□□ -1.61
MMS2	YGL087C	CRM1	P30822	1084 aa	Known RBP	4.97	□□□□□ -1.61
MMS2	YGL087C	TFB1	P32776	642 aa		4.97	□□□□□ -1.61
MMS2	YGL087C	RFC3	P38629	340 aa		4.97	□□□□□ -1.61
MMS2	YGL087C	ISC1	P40015	477 aa	Known RBP	4.97	□□□□□ -1.61
MMS2	YGL087C	COS10	P52924	374 aa		4.97	□□□□□ -1.61
MMS2	YGL087C	HIS4	P00815	799 aa	Known RBP	4.96	□□□□□ -1.62
MMS2	YGL087C	CPR2	P23285	205 aa		4.96	□□□□□ -1.62
MMS2	YGL087C	GEX1	P25596	615 aa		4.96	□□□□□ -1.62
MMS2	YGL087C	PRO3	P32263	286 aa	Known RBP	4.96	□□□□□ -1.62
MMS2	YGL087C	HIR2	P32480	875 aa		4.96	□□□□□ -1.62
MMS2	YGL087C	ECM25	P32525	599 aa		4.96	□□□□□ -1.62
MMS2	YGL087C	YFR016C	P43597	1233 aa	Known RBP	4.96	□□□□□ -1.62
MMS2	YGL087C	RPS0B	P46654	252 aa	Known RBP	4.96	□□□□□ -1.62
MMS2	YGL087C	YJR011C	P47086	261 aa	Predicted RBP	4.96	□□□□□ -1.62
MMS2	YGL087C	TCB2	P48231	1178 aa		4.96	□□□□□ -1.62
MMS2	YGL087C	HOT1	Q03213	719 aa		4.96	□□□□□ -1.62
MMS2	YGL087C	MED2	Q12124	431 aa		4.96	□□□□□ -1.62
MMS2	YGL087C	YAR066W	P0CX18	203 aa		4.95	□□□□□ -1.62
MMS2	YGL087C	YHR214W	P0CX19	203 aa		4.95	□□□□□ -1.62
MMS2	YGL087C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
MMS2	YGL087C	PUT3	P25502	979 aa	Predicted RBP	4.95	□□□□□ -1.62
MMS2	YGL087C	ERV1	P27882	189 aa		4.95	□□□□□ -1.62
MMS2	YGL087C	ATS1	P31386	333 aa		4.95	□□□□□ -1.62
MMS2	YGL087C	NDI1	P32340	513 aa		4.95	□□□□□ -1.62
MMS2	YGL087C	FMP46	P36141	133 aa	Known RBP	4.95	□□□□□ -1.62
MMS2	YGL087C	YJL213W	P40896	331 aa		4.95	□□□□□ -1.62
MMS2	YGL087C	SAS2	P40963	338 aa		4.95	□□□□□ -1.62
MMS2	YGL087C	TRS85	P46944	698 aa		4.95	□□□□□ -1.62
MMS2	YGL087C	YDL186W	P48568	277 aa		4.95	□□□□□ -1.62
MMS2	YGL087C	YGL260W	P53056	76 aa		4.95	□□□□□ -1.62
MMS2	YGL087C	ARK1	P53974	638 aa		4.95	□□□□□ -1.62
MMS2	YGL087C	ODC1	Q03028	310 aa		4.95	□□□□□ -1.62
MMS2	YGL087C	YDR387C	Q04162	555 aa		4.95	□□□□□ -1.62
MMS2	YGL087C	AIM32	Q04689	311 aa		4.95	□□□□□ -1.62
MMS2	YGL087C	PPT2	Q12036	173 aa		4.95	□□□□□ -1.62
MMS2	YGL087C	LPD1	P09624	499 aa	Known RBP	4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms