RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W AVT4P50944 713 aa3.07□□□□□ -1.92
LOC1YFR001W OGG1P53397 376 aaPredicted RBP3.07□□□□□ -1.92
LOC1YFR001W PIR3Q03180 325 aa3.07□□□□□ -1.92
LOC1YFR001W TAF11Q04226 346 aa3.07□□□□□ -1.92
LOC1YFR001W CDC31P06704 161 aaKnown RBP3.06□□□□□ -1.92
LOC1YFR001W CPR1P14832 162 aaKnown RBP3.06□□□□□ -1.92
LOC1YFR001W NDI1P32340 513 aa3.06□□□□□ -1.92
LOC1YFR001W GLC7P32598 312 aaKnown RBP3.06□□□□□ -1.92
LOC1YFR001W CBP4P37267 147 aa3.06□□□□□ -1.92
LOC1YFR001W ISC1P40015 477 aaKnown RBP3.06□□□□□ -1.92
LOC1YFR001W RRT5P43607 289 aa3.06□□□□□ -1.92
LOC1YFR001W RMD9P53140 646 aaKnown RBP3.06□□□□□ -1.92
LOC1YFR001W ART5P53244 586 aaKnown RBP3.06□□□□□ -1.92
LOC1YFR001W KTR5P53966 522 aaPredicted RBP3.06□□□□□ -1.92
LOC1YFR001W VPS72Q03388 795 aa3.06□□□□□ -1.92
LOC1YFR001W SOV1Q04748 898 aa3.06□□□□□ -1.92
LOC1YFR001W HIP1P06775 603 aa3.05□□□□□ -1.92
LOC1YFR001W YCR100CP25606 316 aa3.05□□□□□ -1.92
LOC1YFR001W IDH2P28241 369 aaKnown RBP3.05□□□□□ -1.92
LOC1YFR001W HXT3P32466 567 aaKnown RBP3.05□□□□□ -1.92
LOC1YFR001W GYP6P32806 458 aa3.05□□□□□ -1.92
LOC1YFR001W MRP4P32902 394 aa3.05□□□□□ -1.92
LOC1YFR001W YOX1P34161 385 aa3.05□□□□□ -1.92
LOC1YFR001W YBR139WP38109 508 aa3.05□□□□□ -1.92
LOC1YFR001W MKT1P40850 830 aaKnown RBP3.05□□□□□ -1.92
LOC1YFR001W YPI1P43587 155 aa3.05□□□□□ -1.92
LOC1YFR001W TRS85P46944 698 aa3.05□□□□□ -1.92
LOC1YFR001W MDM1Q01846 1127 aa3.05□□□□□ -1.92
LOC1YFR001W RSA1Q08932 381 aa3.05□□□□□ -1.92
LOC1YFR001W RTN2Q12443 393 aa3.05□□□□□ -1.92
LOC1YFR001W YER078W-AQ3E7A2 54 aa3.05□□□□□ -1.92
LOC1YFR001W INH1P01097 85 aa3.04□□□□□ -1.92
LOC1YFR001W CHS1P08004 1131 aa3.04□□□□□ -1.92
LOC1YFR001W SPS4P09937 338 aa3.04□□□□□ -1.92
LOC1YFR001W RED1P14291 827 aa3.04□□□□□ -1.92
LOC1YFR001W PPH22P23595 377 aa3.04□□□□□ -1.92
LOC1YFR001W CRM1P30822 1084 aaKnown RBP3.04□□□□□ -1.92
LOC1YFR001W ERG3P32353 365 aa3.04□□□□□ -1.92
LOC1YFR001W OTU2P38747 307 aaKnown RBP3.04□□□□□ -1.92
LOC1YFR001W TFG2P41896 400 aaPredicted RBP3.04□□□□□ -1.92
LOC1YFR001W POP6P53218 158 aa3.04□□□□□ -1.92
LOC1YFR001W CAF40P53829 373 aa3.04□□□□□ -1.92
LOC1YFR001W NCS2P53923 493 aaPredicted RBP3.04□□□□□ -1.92
LOC1YFR001W PNG1Q02890 363 aa3.04□□□□□ -1.92
LOC1YFR001W PGA3Q12746 312 aaKnown RBP3.04□□□□□ -1.92
LOC1YFR001W YOL159C-AQ3E769 90 aa3.04□□□□□ -1.92
LOC1YFR001W YAR066WP0CX18 203 aa3.03□□□□□ -1.92
LOC1YFR001W YHR214WP0CX19 203 aa3.03□□□□□ -1.92
LOC1YFR001W RPL3P14126 387 aaKnown RBP3.03□□□□□ -1.92
LOC1YFR001W HEM15P16622 393 aa3.03□□□□□ -1.92
LOC1YFR001W YIM1P28625 365 aa3.03□□□□□ -1.92
LOC1YFR001W PRP21P32524 280 aaPredicted RBP3.03□□□□□ -1.92
LOC1YFR001W NPL6P32832 435 aa3.03□□□□□ -1.92
LOC1YFR001W REC114P32841 428 aa3.03□□□□□ -1.92
LOC1YFR001W NIP100P33420 868 aa3.03□□□□□ -1.92
LOC1YFR001W SPG5P42933 373 aa3.03□□□□□ -1.92
LOC1YFR001W VTC2P43585 828 aa3.03□□□□□ -1.92
LOC1YFR001W RPA49Q01080 415 aaPredicted RBP3.03□□□□□ -1.92
LOC1YFR001W ODC1Q03028 310 aa3.03□□□□□ -1.92
LOC1YFR001W GIR2Q03768 265 aaPredicted RBP3.03□□□□□ -1.92
LOC1YFR001W VTA1Q06263 330 aa3.03□□□□□ -1.92
LOC1YFR001W GPH1P06738 902 aaKnown RBP3.02□□□□□ -1.93
LOC1YFR001W CCT2P39076 527 aaKnown RBP3.02□□□□□ -1.93
LOC1YFR001W DLD2P46681 530 aaKnown RBP3.02□□□□□ -1.93
LOC1YFR001W SYF1Q04048 859 aaPredicted RBP3.02□□□□□ -1.93
LOC1YFR001W YLR287CQ05881 355 aa3.02□□□□□ -1.93
LOC1YFR001W THP3Q12049 470 aaKnown RBP3.02□□□□□ -1.93
LOC1YFR001W RIP1P08067 215 aa3.01□□□□□ -1.93
LOC1YFR001W SAS3P34218 831 aa3.01□□□□□ -1.93
LOC1YFR001W YCR041WP37265 110 aa3.01□□□□□ -1.93
LOC1YFR001W NAT2P37293 288 aa3.01□□□□□ -1.93
LOC1YFR001W YIP1P53039 248 aa3.01□□□□□ -1.93
LOC1YFR001W PCP1P53259 346 aa3.01□□□□□ -1.93
LOC1YFR001W DSL1P53847 754 aa3.01□□□□□ -1.93
LOC1YFR001W YDR387CQ04162 555 aa3.01□□□□□ -1.93
LOC1YFR001W HSP31Q04432 237 aa3.01□□□□□ -1.93
LOC1YFR001W SIL1Q08199 421 aa3.01□□□□□ -1.93
LOC1YFR001W YPL199CQ08954 240 aa3.01□□□□□ -1.93
LOC1YFR001W YLR278CQ05854 1341 aa3□□□□□ -1.93
LOC1YFR001W SAM1P10659 382 aaKnown RBP3□□□□□ -1.93
LOC1YFR001W SEC63P14906 663 aa3□□□□□ -1.93
LOC1YFR001W SAM2P19358 384 aaKnown RBP3□□□□□ -1.93
LOC1YFR001W ECM25P32525 599 aa3□□□□□ -1.93
LOC1YFR001W RML2P32611 393 aa3□□□□□ -1.93
LOC1YFR001W HCS1P34243 683 aa3□□□□□ -1.93
LOC1YFR001W RFS1P38234 210 aaKnown RBP3□□□□□ -1.93
LOC1YFR001W VHC1P38329 1120 aa3□□□□□ -1.93
LOC1YFR001W YIL067CP40514 678 aa3□□□□□ -1.93
LOC1YFR001W YFL067WP43537 175 aa3□□□□□ -1.93
LOC1YFR001W SRB7P47822 140 aa3□□□□□ -1.93
LOC1YFR001W YGL242CP53066 181 aa3□□□□□ -1.93
LOC1YFR001W MNP1P53163 194 aaPredicted RBP3□□□□□ -1.93
LOC1YFR001W GOR1P53839 350 aa3□□□□□ -1.93
LOC1YFR001W RRN11Q04712 507 aa3□□□□□ -1.93
LOC1YFR001W YOR387CQ08910 206 aa3□□□□□ -1.93
LOC1YFR001W ERV2Q12284 196 aa3□□□□□ -1.93
LOC1YFR001W SCM3Q12334 223 aa3□□□□□ -1.93
LOC1YFR001W SFI1Q12369 946 aa3□□□□□ -1.93
LOC1YFR001W SPT15P13393 240 aaKnown RBP2.99□□□□□ -1.93
LOC1YFR001W CLB3P24870 427 aa2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms