RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C YDL057WQ07379 328 aa4.47□□□□□ -1.69
RPB7YDR404C NCE102Q12207 173 aaRIP-Chip data4.47□□□□□ -1.69not detected
RPB7YDR404C PAR32Q12515 295 aaKnown RBP4.47□□□□□ -1.69
RPB7YDR404C PEP4P07267 405 aaKnown RBP4.46□□□□□ -1.7
RPB7YDR404C YMR085WP0CF18 432 aa4.46□□□□□ -1.7
RPB7YDR404C NAT1P12945 854 aaKnown RBP4.46□□□□□ -1.7
RPB7YDR404C MDH1P17505 334 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
RPB7YDR404C PRP2P20095 876 aaPredicted RBP4.46□□□□□ -1.7
RPB7YDR404C CPR2P23285 205 aa4.46□□□□□ -1.7
RPB7YDR404C MBR1P23493 339 aa4.46□□□□□ -1.7
RPB7YDR404C COQ3P27680 312 aa4.46□□□□□ -1.7
RPB7YDR404C DPH2P32461 534 aa4.46□□□□□ -1.7
RPB7YDR404C TFB1P32776 642 aa4.46□□□□□ -1.7
RPB7YDR404C NMD5P46970 1048 aa4.46□□□□□ -1.7
RPB7YDR404C OAZ1Q02803 292 aa4.46□□□□□ -1.7
RPB7YDR404C KAP120Q02932 1032 aa4.46□□□□□ -1.7
RPB7YDR404C GYL1Q04322 720 aa4.46□□□□□ -1.7
RPB7YDR404C PDH1Q12428 516 aaKnown RBP4.46□□□□□ -1.7
RPB7YDR404C RRI1Q12468 440 aa4.46□□□□□ -1.7
RPB7YDR404C CNA1P23287 553 aa4.45□□□□□ -1.7
RPB7YDR404C IDH2P28241 369 aaKnown RBP4.45□□□□□ -1.7
RPB7YDR404C VPH1P32563 840 aaKnown RBP4.45□□□□□ -1.7
RPB7YDR404C YME2P32843 850 aa4.45□□□□□ -1.7
RPB7YDR404C ROT2P38138 954 aa4.45□□□□□ -1.7
RPB7YDR404C RTR1P40084 226 aaPredicted RBP4.45□□□□□ -1.7
RPB7YDR404C ULP2P40537 1034 aaPredicted RBP4.45□□□□□ -1.7
RPB7YDR404C CAK1P43568 368 aaPredicted RBP4.45□□□□□ -1.7
RPB7YDR404C ATG27P46989 271 aa4.45□□□□□ -1.7
RPB7YDR404C SCS3P53012 380 aa4.45□□□□□ -1.7
RPB7YDR404C DUG3P53871 357 aa4.45□□□□□ -1.7
RPB7YDR404C IDP3P53982 420 aaKnown RBP4.45□□□□□ -1.7
RPB7YDR404C RSC9Q03124 581 aa4.45□□□□□ -1.7
RPB7YDR404C ARP10Q04549 284 aa4.45□□□□□ -1.7
RPB7YDR404C ORM2Q06144 216 aa4.45□□□□□ -1.7
RPB7YDR404C SIL1Q08199 421 aa4.45□□□□□ -1.7
RPB7YDR404C ACC1Q00955 2233 aaKnown RBP4.44□□□□□ -1.7
RPB7YDR404C COR1P07256 457 aa4.44□□□□□ -1.7
RPB7YDR404C RPB8P20436 146 aa4.44□□□□□ -1.7
RPB7YDR404C SUI2P20459 304 aaKnown RBP4.44□□□□□ -1.7
RPB7YDR404C SPB1P25582 841 aaPredicted RBP4.44□□□□□ -1.7
RPB7YDR404C YIM1P28625 365 aa4.44□□□□□ -1.7
RPB7YDR404C MDL1P33310 695 aa4.44□□□□□ -1.7
RPB7YDR404C RXT2P38255 430 aa4.44□□□□□ -1.7
RPB7YDR404C GDI1P39958 451 aaKnown RBP4.44□□□□□ -1.7
RPB7YDR404C ALK1P43633 760 aaKnown RBP4.44□□□□□ -1.7
RPB7YDR404C SNG1P46950 547 aa4.44□□□□□ -1.7
RPB7YDR404C PKP2P53170 491 aa4.44□□□□□ -1.7
RPB7YDR404C DON1Q05610 365 aa4.44□□□□□ -1.7
RPB7YDR404C GPM3Q12326 303 aa4.44□□□□□ -1.7
RPB7YDR404C MOT1P32333 1867 aa4.43□□□□□ -1.7
RPB7YDR404C MYO1P08964 1928 aa4.43□□□□□ -1.7
RPB7YDR404C VMA2P16140 517 aaKnown RBP4.43□□□□□ -1.7
RPB7YDR404C PTP1P25044 335 aa4.43□□□□□ -1.7
RPB7YDR404C RGT1P32862 1170 aa4.43□□□□□ -1.7
RPB7YDR404C SHP1P34223 423 aa4.43□□□□□ -1.7
RPB7YDR404C PTK1P36002 662 aaPredicted RBP4.43□□□□□ -1.7
RPB7YDR404C THI2P38141 450 aa4.43□□□□□ -1.7
RPB7YDR404C RRT2P38332 387 aa4.43□□□□□ -1.7
RPB7YDR404C YHR210CP38893 341 aa4.43□□□□□ -1.7
RPB7YDR404C MBB1P39534 108 aa4.43□□□□□ -1.7
RPB7YDR404C SNO3P43544 222 aa4.43□□□□□ -1.7
RPB7YDR404C YJL055WP47044 245 aa4.43□□□□□ -1.7
RPB7YDR404C YGR149WP48236 432 aa4.43□□□□□ -1.7
RPB7YDR404C DRN1P53255 507 aaKnown RBP4.43□□□□□ -1.7
RPB7YDR404C SMM1P53720 384 aaKnown RBP4.43□□□□□ -1.7
RPB7YDR404C HEF3P53978 1044 aaKnown RBP4.43□□□□□ -1.7
RPB7YDR404C SLG1P54867 378 aa4.43□□□□□ -1.7
RPB7YDR404C SEC5P89102 971 aa4.43□□□□□ -1.7
RPB7YDR404C CAC2Q04199 468 aa4.43□□□□□ -1.7
RPB7YDR404C MCP2Q06567 569 aa4.43□□□□□ -1.7
RPB7YDR404C YDL218WQ07629 317 aa4.43□□□□□ -1.7
RPB7YDR404C YAP7Q08182 245 aa4.43□□□□□ -1.7
RPB7YDR404C THP1Q08231 455 aa4.43□□□□□ -1.7
RPB7YDR404C PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
RPB7YDR404C PGK1P00560 416 aaKnown RBP4.42□□□□□ -1.7
RPB7YDR404C RRP7P25368 297 aaPredicted RBP4.42□□□□□ -1.7
RPB7YDR404C POT1P27796 417 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
RPB7YDR404C RAD14P28519 371 aa4.42□□□□□ -1.7
RPB7YDR404C AFG1P32317 509 aa4.42□□□□□ -1.7
RPB7YDR404C YKL023WP36103 277 aaKnown RBP4.42□□□□□ -1.7
RPB7YDR404C LEU5P38702 357 aa4.42□□□□□ -1.7
RPB7YDR404C PHO90P39535 881 aa4.42□□□□□ -1.7
RPB7YDR404C VRG4P40107 337 aa4.42□□□□□ -1.7
RPB7YDR404C YGL108CP53139 140 aa4.42□□□□□ -1.7
RPB7YDR404C SOL4P53315 255 aa4.42□□□□□ -1.7
RPB7YDR404C COP1P53622 1201 aaKnown RBP4.42□□□□□ -1.7
RPB7YDR404C POS5Q06892 414 aa4.42□□□□□ -1.7
RPB7YDR404C YOR365CQ08844 703 aa4.42□□□□□ -1.7
RPB7YDR404C RDR1Q08904 546 aa4.42□□□□□ -1.7
RPB7YDR404C SPE3Q12074 293 aaKnown RBP4.42□□□□□ -1.7
RPB7YDR404C ICT1Q12385 394 aa4.42□□□□□ -1.7
RPB7YDR404C TCM62P38228 572 aaKnown RBP4.41□□□□□ -1.7
RPB7YDR404C TIF4631P39935 952 aaKnown RBP4.41□□□□□ -1.7
RPB7YDR404C YTA12P40341 825 aa4.41□□□□□ -1.7
RPB7YDR404C XBP1P40489 647 aa4.41□□□□□ -1.7
RPB7YDR404C SEC28P40509 296 aaKnown RBP4.41□□□□□ -1.7
RPB7YDR404C EFM4P40516 257 aa4.41□□□□□ -1.7
RPB7YDR404C FMS1P50264 508 aa4.41□□□□□ -1.7
RPB7YDR404C YGL138CP53122 345 aa4.41□□□□□ -1.7
RPB7YDR404C BUD32P53323 261 aa4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms