RNA–Protein interactions for RNA: YDR317W

HIM1, Transcript of Protein of unknown function involved in DNA repair, yeast

Gene HIM1, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HIM1	YDR317W	LOS1	P33418	1100 aa	Predicted RBP	3.96	□□□□□ -1.78
HIM1	YDR317W	CIN4	P39110	191 aa		3.96	□□□□□ -1.78
HIM1	YDR317W	SNG1	P46950	547 aa		3.96	□□□□□ -1.78
HIM1	YDR317W	IKS1	P47042	667 aa		3.96	□□□□□ -1.78
HIM1	YDR317W	VID30	P53076	958 aa		3.96	□□□□□ -1.78
HIM1	YDR317W	DUO1	P53168	247 aa	Known RBP	3.96	□□□□□ -1.78
HIM1	YDR317W	LSB1	P53281	241 aa		3.96	□□□□□ -1.78
HIM1	YDR317W	SAM50	P53969	484 aa		3.96	□□□□□ -1.78
HIM1	YDR317W	MSC1	Q03104	513 aa		3.96	□□□□□ -1.78
HIM1	YDR317W	SPE4	Q12455	300 aa		3.96	□□□□□ -1.78
HIM1	YDR317W	PEP5	P12868	1029 aa		3.95	□□□□□ -1.78
HIM1	YDR317W	SAM2	P19358	384 aa	Known RBP	3.95	□□□□□ -1.78
HIM1	YDR317W	SGF29	P25554	259 aa		3.95	□□□□□ -1.78
HIM1	YDR317W	IMP2'	P32351	346 aa		3.95	□□□□□ -1.78
HIM1	YDR317W	ANP1	P32629	500 aa		3.95	□□□□□ -1.78
HIM1	YDR317W	NOP4	P37838	685 aa	Known RBP	3.95	□□□□□ -1.78
HIM1	YDR317W	BUD32	P53323	261 aa		3.95	□□□□□ -1.78
HIM1	YDR317W	RPT6	Q01939	405 aa	Known RBP	3.95	□□□□□ -1.78
HIM1	YDR317W	SCW10	Q04951	389 aa		3.95	□□□□□ -1.78
HIM1	YDR317W	TUS1	Q06412	1307 aa		3.95	□□□□□ -1.78
HIM1	YDR317W	EST1	P17214	699 aa	Predicted RBP	3.94	□□□□□ -1.78
HIM1	YDR317W	PEP3	P27801	918 aa		3.94	□□□□□ -1.78
HIM1	YDR317W	SEF1	P34228	1148 aa		3.94	□□□□□ -1.78
HIM1	YDR317W	MYO3	P36006	1272 aa		3.94	□□□□□ -1.78
HIM1	YDR317W	ALG5	P40350	334 aa		3.94	□□□□□ -1.78
HIM1	YDR317W	DRN1	P53255	507 aa	Known RBP	3.94	□□□□□ -1.78
HIM1	YDR317W	RHO4	Q00246	291 aa		3.94	□□□□□ -1.78
HIM1	YDR317W	YKU80	Q04437	629 aa		3.94	□□□□□ -1.78
HIM1	YDR317W	YDL057W	Q07379	328 aa		3.94	□□□□□ -1.78
HIM1	YDR317W	THI20	Q08224	551 aa		3.94	□□□□□ -1.78
HIM1	YDR317W	PPT2	Q12036	173 aa		3.94	□□□□□ -1.78
HIM1	YDR317W	RCN2	Q12044	265 aa		3.94	□□□□□ -1.78
HIM1	YDR317W	CAR1	P00812	333 aa	Known RBP	3.93	□□□□□ -1.78
HIM1	YDR317W	SAM1	P10659	382 aa	Known RBP	3.93	□□□□□ -1.78
HIM1	YDR317W	MAK31	P23059	88 aa		3.93	□□□□□ -1.78
HIM1	YDR317W	ECM15	P35195	104 aa		3.93	□□□□□ -1.78
HIM1	YDR317W	MDM31	P38880	579 aa		3.93	□□□□□ -1.78
HIM1	YDR317W	FLC2	P39719	783 aa		3.93	□□□□□ -1.78
HIM1	YDR317W	VPS52	P39904	641 aa		3.93	□□□□□ -1.78
HIM1	YDR317W	ALT2	P52892	507 aa		3.93	□□□□□ -1.78
HIM1	YDR317W	RBG2	P53295	368 aa	Known RBP	3.93	□□□□□ -1.78
HIM1	YDR317W	NGL3	Q03210	505 aa		3.93	□□□□□ -1.78
HIM1	YDR317W	RPC11	Q04307	110 aa	Predicted RBP	3.93	□□□□□ -1.78
HIM1	YDR317W	SEM1	O94742	89 aa		3.92	□□□□□ -1.78
HIM1	YDR317W	RPL15A	P05748	204 aa	Known RBP	3.92	□□□□□ -1.78
HIM1	YDR317W	MTF1	P14908	341 aa	Known RBP	3.92	□□□□□ -1.78
HIM1	YDR317W	ART10	P18634	518 aa	Known RBP	3.92	□□□□□ -1.78
HIM1	YDR317W	AGA1	P32323	725 aa		3.92	□□□□□ -1.78
HIM1	YDR317W	UTR4	P32626	227 aa		3.92	□□□□□ -1.78
HIM1	YDR317W	PTR2	P32901	601 aa		3.92	□□□□□ -1.78
HIM1	YDR317W	REG2	P38232	338 aa		3.92	□□□□□ -1.78
HIM1	YDR317W	PHO88	P38264	188 aa	Predicted RBP	3.92	□□□□□ -1.78
HIM1	YDR317W	YHR218W	P38899	603 aa		3.92	□□□□□ -1.78
HIM1	YDR317W	NOP16	P40007	231 aa	Known RBP	3.92	□□□□□ -1.78
HIM1	YDR317W	CSM2	P40465	213 aa		3.92	□□□□□ -1.78
HIM1	YDR317W	SPO22	P40511	975 aa		3.92	□□□□□ -1.78
HIM1	YDR317W	IPI3	P53877	555 aa		3.92	□□□□□ -1.78
HIM1	YDR317W	IMP4	P53941	290 aa	Known RBP	3.92	□□□□□ -1.78
HIM1	YDR317W	SLD5	Q03406	294 aa		3.92	□□□□□ -1.78
HIM1	YDR317W	HCR1	Q05775	265 aa	Known RBP	3.92	□□□□□ -1.78
HIM1	YDR317W	YDR056C	Q12025	205 aa		3.92	□□□□□ -1.78
HIM1	YDR317W	NMD4	Q12129	218 aa		3.92	□□□□□ -1.78
HIM1	YDR317W	NCE102	Q12207	173 aa	RIP-Chip data	3.92	□□□□□ -1.78	not detected
HIM1	YDR317W	TY1B-A	O13527	1196 aa	Known RBP	3.91	□□□□□ -1.78
HIM1	YDR317W	PAP1	P29468	568 aa	Known RBP	3.91	□□□□□ -1.78
HIM1	YDR317W	MCR1	P36060	302 aa	Known RBP	3.91	□□□□□ -1.78
HIM1	YDR317W	YBP1	P38315	674 aa		3.91	□□□□□ -1.78
HIM1	YDR317W	RPR2	P40571	144 aa		3.91	□□□□□ -1.78
HIM1	YDR317W	APT1	P49435	187 aa	Known RBP	3.91	□□□□□ -1.78
HIM1	YDR317W	FMS1	P50264	508 aa		3.91	□□□□□ -1.78
HIM1	YDR317W	ARP5	P53946	755 aa		3.91	□□□□□ -1.78
HIM1	YDR317W	MDM1	Q01846	1127 aa		3.91	□□□□□ -1.78
HIM1	YDR317W	RPM2	Q02773	1202 aa		3.91	□□□□□ -1.78
HIM1	YDR317W	RLI1	Q03195	608 aa	Known RBP	3.91	□□□□□ -1.78
HIM1	YDR317W	MYO5	Q04439	1219 aa	Known RBP	3.91	□□□□□ -1.78
HIM1	YDR317W	SPH1	Q06160	661 aa		3.91	□□□□□ -1.78
HIM1	YDR317W	YEH1	Q07804	573 aa		3.91	□□□□□ -1.78
HIM1	YDR317W	PGA3	Q12746	312 aa	Known RBP	3.91	□□□□□ -1.78
HIM1	YDR317W	APE1	P14904	514 aa		3.9	□□□□□ -1.79
HIM1	YDR317W	SAN1	P22470	610 aa		3.9	□□□□□ -1.79
HIM1	YDR317W	NDC1	P32500	655 aa		3.9	□□□□□ -1.79
HIM1	YDR317W	YOX1	P34161	385 aa		3.9	□□□□□ -1.79
HIM1	YDR317W	SIP2	P34164	415 aa	Known RBP	3.9	□□□□□ -1.79
HIM1	YDR317W	SHP1	P34223	423 aa		3.9	□□□□□ -1.79
HIM1	YDR317W	UIP5	P36137	443 aa		3.9	□□□□□ -1.79
HIM1	YDR317W	YFL040W	P43562	540 aa		3.9	□□□□□ -1.79
HIM1	YDR317W	RMD8	P43620	662 aa		3.9	□□□□□ -1.79
HIM1	YDR317W	ALK1	P43633	760 aa	Known RBP	3.9	□□□□□ -1.79
HIM1	YDR317W	LIF1	P53150	421 aa		3.9	□□□□□ -1.79
HIM1	YDR317W	YGR066C	P53242	292 aa		3.9	□□□□□ -1.79
HIM1	YDR317W	YDR341C	Q05506	607 aa	Known RBP	3.9	□□□□□ -1.79
HIM1	YDR317W	SUE1	Q06524	206 aa		3.9	□□□□□ -1.79
HIM1	YDR317W	HSH49	Q99181	213 aa	Predicted RBP	3.9	□□□□□ -1.79
HIM1	YDR317W	MRP13	P12686	339 aa		3.89	□□□□□ -1.79
HIM1	YDR317W	AAC3	P18238	307 aa		3.89	□□□□□ -1.79
HIM1	YDR317W	YCR022C	P25620	114 aa		3.89	□□□□□ -1.79
HIM1	YDR317W	BUD14	P27637	709 aa		3.89	□□□□□ -1.79
HIM1	YDR317W	SAS3	P34218	831 aa		3.89	□□□□□ -1.79
HIM1	YDR317W	OPY1	P38271	328 aa		3.89	□□□□□ -1.79
HIM1	YDR317W	CCT6	P39079	546 aa		3.89	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms