RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSP42	YDR171W	SLC1	P33333	303 aa		4.16	□□□□□ -1.74
HSP42	YDR171W	TSC10	P38342	320 aa		4.16	□□□□□ -1.74
HSP42	YDR171W	SHC1	P39000	512 aa		4.16	□□□□□ -1.74
HSP42	YDR171W	PSD1	P39006	500 aa		4.16	□□□□□ -1.74
HSP42	YDR171W	MET18	P40469	1032 aa		4.16	□□□□□ -1.74
HSP42	YDR171W	YIL024C	P40543	189 aa		4.16	□□□□□ -1.74
HSP42	YDR171W	IST3	P40565	148 aa	Predicted RBP	4.16	□□□□□ -1.74
HSP42	YDR171W	YGR016W	P53209	190 aa		4.16	□□□□□ -1.74
HSP42	YDR171W	SMD2	Q06217	110 aa	Known RBP	4.16	□□□□□ -1.74
HSP42	YDR171W	BCP1	Q06338	283 aa		4.16	□□□□□ -1.74
HSP42	YDR171W	CRN1	Q06440	651 aa		4.16	□□□□□ -1.74
HSP42	YDR171W	YDL114W	Q07530	308 aa		4.16	□□□□□ -1.74
HSP42	YDR171W	SMC5	Q08204	1093 aa		4.16	□□□□□ -1.74
HSP42	YDR171W	DSE3	Q08729	430 aa		4.16	□□□□□ -1.74
HSP42	YDR171W	NOT5	Q12514	560 aa	Predicted RBP	4.16	□□□□□ -1.74
HSP42	YDR171W	FLO11	P08640	1367 aa		4.15	□□□□□ -1.74
HSP42	YDR171W	CMD1	P06787	147 aa	Known RBP	4.15	□□□□□ -1.75
HSP42	YDR171W	VMA2	P16140	517 aa	Known RBP	4.15	□□□□□ -1.75
HSP42	YDR171W	CBF1	P17106	351 aa		4.15	□□□□□ -1.75
HSP42	YDR171W	RPS5	P26783	225 aa	Known RBP	4.15	□□□□□ -1.75
HSP42	YDR171W	RPT5	P33297	434 aa	Known RBP	4.15	□□□□□ -1.75
HSP42	YDR171W	POP4	P38336	279 aa		4.15	□□□□□ -1.75
HSP42	YDR171W	FLO5	P38894	1075 aa		4.15	□□□□□ -1.75
HSP42	YDR171W	AXL2	P38928	823 aa		4.15	□□□□□ -1.75
HSP42	YDR171W	STN1	P38960	494 aa		4.15	□□□□□ -1.75
HSP42	YDR171W	PES4	P39684	611 aa		4.15	□□□□□ -1.75
HSP42	YDR171W	FRT2	P39734	528 aa		4.15	□□□□□ -1.75
HSP42	YDR171W	YMR134W	P40207	237 aa		4.15	□□□□□ -1.75
HSP42	YDR171W	PFK26	P40433	827 aa	Known RBP	4.15	□□□□□ -1.75
HSP42	YDR171W	CDC1	P40986	491 aa		4.15	□□□□□ -1.75
HSP42	YDR171W	KTR5	P53966	522 aa	Predicted RBP	4.15	□□□□□ -1.75
HSP42	YDR171W	SWP1	Q02795	286 aa		4.15	□□□□□ -1.75
HSP42	YDR171W	TLG1	Q03322	224 aa		4.15	□□□□□ -1.75
HSP42	YDR171W	YDR239C	Q03780	787 aa		4.15	□□□□□ -1.75
HSP42	YDR171W	ERB1	Q04660	807 aa	Known RBP	4.15	□□□□□ -1.75
HSP42	YDR171W	ATG26	Q06321	1198 aa		4.15	□□□□□ -1.75
HSP42	YDR171W	TSR2	Q06672	205 aa	Known RBP	4.15	□□□□□ -1.75
HSP42	YDR171W	BUD7	Q08754	746 aa		4.15	□□□□□ -1.75
HSP42	YDR171W	RKM1	Q08961	583 aa	Predicted RBP	4.15	□□□□□ -1.75
HSP42	YDR171W	HKR1	P41809	1802 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	TY1B-A	O13527	1196 aa	Known RBP	4.14	□□□□□ -1.75
HSP42	YDR171W	YLR302C	O13544	120 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	SEM1	O94742	89 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	PMS1	P14242	873 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	GPI10	P30777	616 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	DBF4	P32325	704 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	TFC1	P32367	649 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	TPO5	P36029	618 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	RCN1	P36054	211 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	UBP13	P38187	747 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	DIA4	P38705	446 aa	Predicted RBP	4.14	□□□□□ -1.75
HSP42	YDR171W	TRM5	P38793	499 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
HSP42	YDR171W	RIC1	P40395	1056 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	ASG1	P40467	964 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	MAM33	P40513	266 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	SNL1	P40548	159 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	SWP82	P43554	623 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	SAD1	P43589	448 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	YJL055W	P47044	245 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	YJR054W	P47114	497 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	NBP1	P52919	319 aa	Predicted RBP	4.14	□□□□□ -1.75
HSP42	YDR171W	DCP2	P53550	970 aa	Known RBP	4.14	□□□□□ -1.75
HSP42	YDR171W	COP1	P53622	1201 aa	Known RBP	4.14	□□□□□ -1.75
HSP42	YDR171W	YDR476C	Q03362	224 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	RAD30	Q04049	632 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	YLR053C	Q12026	108 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	HRT3	Q12347	344 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	SPE4	Q12455	300 aa		4.14	□□□□□ -1.75
HSP42	YDR171W	RRP36	Q12481	300 aa	Predicted RBP	4.14	□□□□□ -1.75
HSP42	YDR171W	UBA1	P22515	1024 aa	Known RBP	4.13	□□□□□ -1.75
HSP42	YDR171W	ERG8	P24521	451 aa		4.13	□□□□□ -1.75
HSP42	YDR171W	YCR006C	P25350	157 aa		4.13	□□□□□ -1.75
HSP42	YDR171W	RRT12	P25381	491 aa		4.13	□□□□□ -1.75
HSP42	YDR171W	RAD14	P28519	371 aa		4.13	□□□□□ -1.75
HSP42	YDR171W	TPS2	P31688	896 aa	Known RBP	4.13	□□□□□ -1.75
HSP42	YDR171W	PRO3	P32263	286 aa	Known RBP	4.13	□□□□□ -1.75
HSP42	YDR171W	MGM1	P32266	881 aa		4.13	□□□□□ -1.75
HSP42	YDR171W	OCT1	P35999	772 aa		4.13	□□□□□ -1.75
HSP42	YDR171W	SLM4	P38247	162 aa		4.13	□□□□□ -1.75
HSP42	YDR171W	UTP9	P38882	575 aa	Known RBP	4.13	□□□□□ -1.75
HSP42	YDR171W	NPT1	P39683	429 aa	Known RBP	4.13	□□□□□ -1.75
HSP42	YDR171W	YER010C	P40011	234 aa		4.13	□□□□□ -1.75
HSP42	YDR171W	YJL107C	P42947	387 aa		4.13	□□□□□ -1.75
HSP42	YDR171W	EMC2	P47133	292 aa	Known RBP	4.13	□□□□□ -1.75
HSP42	YDR171W	TRF5	P48561	642 aa	Known RBP	4.13	□□□□□ -1.75
HSP42	YDR171W	NUP84	P52891	726 aa		4.13	□□□□□ -1.75
HSP42	YDR171W	YGR111W	P53265	400 aa		4.13	□□□□□ -1.75
HSP42	YDR171W	SNO4	Q04902	237 aa		4.13	□□□□□ -1.75
HSP42	YDR171W	FUS2	Q05670	677 aa		4.13	□□□□□ -1.75
HSP42	YDR171W	PDR8	Q06149	701 aa		4.13	□□□□□ -1.75
HSP42	YDR171W	RPN8	Q08723	338 aa	Known RBP	4.13	□□□□□ -1.75
HSP42	YDR171W	HSP33	Q08914	237 aa	Known RBP	4.13	□□□□□ -1.75
HSP42	YDR171W	UIP4	Q08926	304 aa		4.13	□□□□□ -1.75
HSP42	YDR171W	RSA1	Q08932	381 aa		4.13	□□□□□ -1.75
HSP42	YDR171W	HSP32	Q08992	237 aa		4.13	□□□□□ -1.75
HSP42	YDR171W	YPR202W	Q08993	238 aa		4.13	□□□□□ -1.75
HSP42	YDR171W	GPM3	Q12326	303 aa		4.13	□□□□□ -1.75
HSP42	YDR171W	ERG27	Q12452	347 aa	Known RBP	4.13	□□□□□ -1.75
HSP42	YDR171W	HTZ1	Q12692	134 aa	Known RBP	4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms