RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C ECM15P35195 104 aa3.92□□□□□ -1.78
SHU2YDR078C SWH1P35845 1188 aa3.92□□□□□ -1.78
SHU2YDR078C CBP4P37267 147 aa3.92□□□□□ -1.78
SHU2YDR078C GND1P38720 489 aaKnown RBP3.92□□□□□ -1.78
SHU2YDR078C FAU1P40099 211 aa3.92□□□□□ -1.78
SHU2YDR078C SCD6P45978 349 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
SHU2YDR078C RPS0BP46654 252 aaKnown RBP3.92□□□□□ -1.78
SHU2YDR078C YJL132WP47014 750 aa3.92□□□□□ -1.78
SHU2YDR078C MDV1P47025 714 aa3.92□□□□□ -1.78
SHU2YDR078C GPI1P53306 609 aa3.92□□□□□ -1.78
SHU2YDR078C NCS2P53923 493 aaPredicted RBP3.92□□□□□ -1.78
SHU2YDR078C SAM50P53969 484 aa3.92□□□□□ -1.78
SHU2YDR078C BET4Q00618 327 aa3.92□□□□□ -1.78
SHU2YDR078C STP1Q00947 519 aa3.92□□□□□ -1.78
SHU2YDR078C MRPL1Q04599 285 aa3.92□□□□□ -1.78
SHU2YDR078C MDM30Q05930 598 aa3.92□□□□□ -1.78
SHU2YDR078C DIS3Q08162 1001 aaKnown RBP3.92□□□□□ -1.78
SHU2YDR078C RKM1Q08961 583 aaPredicted RBP3.92□□□□□ -1.78
SHU2YDR078C AEP3Q12089 606 aa3.92□□□□□ -1.78
SHU2YDR078C YLR278CQ05854 1341 aa3.92□□□□□ -1.78
SHU2YDR078C RPL1AP0CX43 217 aaKnown RBP3.91□□□□□ -1.78
SHU2YDR078C RPL1BP0CX44 217 aaKnown RBP3.91□□□□□ -1.78
SHU2YDR078C PPZ1P26570 692 aa3.91□□□□□ -1.78
SHU2YDR078C ACH1P32316 526 aa3.91□□□□□ -1.78
SHU2YDR078C PRP21P32524 280 aaPredicted RBP3.91□□□□□ -1.78
SHU2YDR078C RPN2P32565 945 aaKnown RBP3.91□□□□□ -1.78
SHU2YDR078C VPS17P32913 551 aa3.91□□□□□ -1.78
SHU2YDR078C RFC3P38629 340 aa3.91□□□□□ -1.78
SHU2YDR078C OSH3P38713 996 aaKnown RBP3.91□□□□□ -1.78
SHU2YDR078C CCT2P39076 527 aaKnown RBP3.91□□□□□ -1.78
SHU2YDR078C YER130CP39959 443 aa3.91□□□□□ -1.78
SHU2YDR078C VHS2P40463 436 aa3.91□□□□□ -1.78
SHU2YDR078C CSM2P40465 213 aa3.91□□□□□ -1.78
SHU2YDR078C YIR016WP40572 265 aa3.91□□□□□ -1.78
SHU2YDR078C GUF1P46943 645 aa3.91□□□□□ -1.78
SHU2YDR078C YMR254CQ04838 102 aa3.91□□□□□ -1.78
SHU2YDR078C SMF3Q12078 473 aaPredicted RBP3.91□□□□□ -1.78
SHU2YDR078C UBX3Q12229 455 aa3.91□□□□□ -1.78
SHU2YDR078C SKS1Q12505 502 aa3.91□□□□□ -1.78
SHU2YDR078C MTR10Q99189 972 aa3.91□□□□□ -1.78
SHU2YDR078C MIC60P36112 540 aa3.9□□□□□ -1.79
SHU2YDR078C ZTA1P38230 334 aaKnown RBP3.9□□□□□ -1.79
SHU2YDR078C EFM2P38347 419 aa3.9□□□□□ -1.79
SHU2YDR078C YTA12P40341 825 aa3.9□□□□□ -1.79
SHU2YDR078C PCI8P40512 444 aa3.9□□□□□ -1.79
SHU2YDR078C EOS1P53938 366 aa3.9□□□□□ -1.79
SHU2YDR078C OCA2P53949 197 aa3.9□□□□□ -1.79
SHU2YDR078C BNA5Q05979 453 aa3.9□□□□□ -1.79
SHU2YDR078C MLH2Q07980 695 aa3.9□□□□□ -1.79
SHU2YDR078C LSP1Q12230 341 aaKnown RBP3.9□□□□□ -1.79
SHU2YDR078C RKM5Q12367 367 aa3.9□□□□□ -1.79
SHU2YDR078C TY1B-AO13527 1196 aaKnown RBP3.89□□□□□ -1.79
SHU2YDR078C SCEIP03882 235 aa3.89□□□□□ -1.79
SHU2YDR078C LEU4P06208 619 aaKnown RBP3.89□□□□□ -1.79
SHU2YDR078C YFL068WP0CX99 160 aa3.89□□□□□ -1.79
SHU2YDR078C YLL066W-AP0CY00 160 aa3.89□□□□□ -1.79
SHU2YDR078C YLL067W-AP0CY01 160 aa3.89□□□□□ -1.79
SHU2YDR078C SEC62P21825 274 aa3.89□□□□□ -1.79
SHU2YDR078C PTP1P25044 335 aa3.89□□□□□ -1.79
SHU2YDR078C RHB1P25378 209 aa3.89□□□□□ -1.79
SHU2YDR078C BUB3P26449 341 aa3.89□□□□□ -1.79
SHU2YDR078C ERG1P32476 496 aaKnown RBP3.89□□□□□ -1.79
SHU2YDR078C FRE1P32791 686 aa3.89□□□□□ -1.79
SHU2YDR078C SPC97P38863 823 aa3.89□□□□□ -1.79
SHU2YDR078C SAS2P40963 338 aa3.89□□□□□ -1.79
SHU2YDR078C YJR011CP47086 261 aaPredicted RBP3.89□□□□□ -1.79
SHU2YDR078C TDA7P53882 636 aaPredicted RBP3.89□□□□□ -1.79
SHU2YDR078C YPL107WQ02873 248 aa3.89□□□□□ -1.79
SHU2YDR078C YMR087WQ04299 284 aa3.89□□□□□ -1.79
SHU2YDR078C HSP31Q04432 237 aa3.89□□□□□ -1.79
SHU2YDR078C YDR286CQ05530 114 aa3.89□□□□□ -1.79
SHU2YDR078C YLR456WQ06199 204 aa3.89□□□□□ -1.79
SHU2YDR078C PGC1Q08959 321 aa3.89□□□□□ -1.79
SHU2YDR078C FRE6Q12473 712 aa3.89□□□□□ -1.79
SHU2YDR078C CAR1P00812 333 aaKnown RBP3.88□□□□□ -1.79
SHU2YDR078C ARO3P14843 370 aaKnown RBP3.88□□□□□ -1.79
SHU2YDR078C RAD24P32641 659 aa3.88□□□□□ -1.79
SHU2YDR078C ASK1P35734 292 aa3.88□□□□□ -1.79
SHU2YDR078C YIL152WP40455 235 aa3.88□□□□□ -1.79
SHU2YDR078C ATP22P50273 684 aaPredicted RBP3.88□□□□□ -1.79
SHU2YDR078C YGL082WP53155 381 aa3.88□□□□□ -1.79
SHU2YDR078C BTN2P53286 410 aa3.88□□□□□ -1.79
SHU2YDR078C DSL1P53847 754 aa3.88□□□□□ -1.79
SHU2YDR078C RHO5P53879 331 aaKnown RBP3.88□□□□□ -1.79
SHU2YDR078C RBA50Q04418 439 aa3.88□□□□□ -1.79
SHU2YDR078C CUE5Q08412 411 aaKnown RBP3.88□□□□□ -1.79
SHU2YDR078C NRT1Q08485 598 aa3.88□□□□□ -1.79
SHU2YDR078C DSE3Q08729 430 aa3.88□□□□□ -1.79
SHU2YDR078C NFI1Q12216 726 aa3.88□□□□□ -1.79
SHU2YDR078C AMD1P15274 810 aaKnown RBP3.87□□□□□ -1.79
SHU2YDR078C EXO70P19658 623 aa3.87□□□□□ -1.79
SHU2YDR078C KRR1P25586 316 aaPredicted RBP3.87□□□□□ -1.79
SHU2YDR078C MSP1P28737 362 aa3.87□□□□□ -1.79
SHU2YDR078C NIP1P32497 812 aaKnown RBP3.87□□□□□ -1.79
SHU2YDR078C SOR1P35497 357 aaKnown RBP3.87□□□□□ -1.79
SHU2YDR078C ASC1P38011 319 aaKnown RBP3.87□□□□□ -1.79
SHU2YDR078C RRP3P38712 501 aaKnown RBP3.87□□□□□ -1.79
SHU2YDR078C FAD1P38913 306 aa3.87□□□□□ -1.79
SHU2YDR078C AZF1P41696 914 aa3.87□□□□□ -1.79
SHU2YDR078C MLC1P53141 149 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms