RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	RAD61	Q99359	647 aa		5.12	□□□□□ -1.59
LCB2	YDR062W	RHO2	P06781	192 aa		5.11	□□□□□ -1.59
LCB2	YDR062W	COR1	P07256	457 aa		5.11	□□□□□ -1.59
LCB2	YDR062W	SCH9	P11792	824 aa	Known RBP	5.11	□□□□□ -1.59
LCB2	YDR062W	RDS1	P25611	832 aa		5.11	□□□□□ -1.59
LCB2	YDR062W	LIP5	P32875	414 aa		5.11	□□□□□ -1.59
LCB2	YDR062W	AIM3	P38266	947 aa	Known RBP	5.11	□□□□□ -1.59
LCB2	YDR062W	SSO2	P39926	295 aa		5.11	□□□□□ -1.59
LCB2	YDR062W	SLG1	P54867	378 aa		5.11	□□□□□ -1.59
LCB2	YDR062W	RPS10A	Q08745	105 aa	Predicted RBP	5.11	□□□□□ -1.59
LCB2	YDR062W	SFG1	Q12507	346 aa		5.11	□□□□□ -1.59
LCB2	YDR062W	RAV1	P47104	1357 aa		5.1	□□□□□ -1.59
LCB2	YDR062W	PPR1	P07272	904 aa	Predicted RBP	5.1	□□□□□ -1.59
LCB2	YDR062W	PUT2	P07275	575 aa		5.1	□□□□□ -1.59
LCB2	YDR062W	RIM1	P32445	135 aa	Known RBP	5.1	□□□□□ -1.59
LCB2	YDR062W	YUH1	P35127	236 aa		5.1	□□□□□ -1.59
LCB2	YDR062W	MSG5	P38590	489 aa		5.1	□□□□□ -1.59
LCB2	YDR062W	ANS1	P38832	159 aa		5.1	□□□□□ -1.59
LCB2	YDR062W	MBB1	P39534	108 aa		5.1	□□□□□ -1.59
LCB2	YDR062W	NDC80	P40460	691 aa		5.1	□□□□□ -1.59
LCB2	YDR062W	YFR018C	P43599	363 aa		5.1	□□□□□ -1.59
LCB2	YDR062W	KAP95	Q06142	861 aa	Known RBP	5.1	□□□□□ -1.59
LCB2	YDR062W	YLR413W	Q06689	675 aa		5.1	□□□□□ -1.59
LCB2	YDR062W	NDJ1	Q12366	352 aa		5.1	□□□□□ -1.59
LCB2	YDR062W	RAP1	P11938	827 aa		5.09	□□□□□ -1.59
LCB2	YDR062W	PMR1	P13586	950 aa		5.09	□□□□□ -1.59
LCB2	YDR062W	GEX1	P25596	615 aa		5.09	□□□□□ -1.59
LCB2	YDR062W	KRE2	P27809	442 aa		5.09	□□□□□ -1.59
LCB2	YDR062W	BEM1	P29366	551 aa		5.09	□□□□□ -1.59
LCB2	YDR062W	VHC1	P38329	1120 aa		5.09	□□□□□ -1.59
LCB2	YDR062W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.59	RIP-Chip
LCB2	YDR062W	MNN9	P39107	395 aa	Known RBP	5.09	□□□□□ -1.59
LCB2	YDR062W	CIN1	P40987	1014 aa		5.09	□□□□□ -1.59
LCB2	YDR062W	NMD5	P46970	1048 aa		5.09	□□□□□ -1.59
LCB2	YDR062W	ECL1	P48235	211 aa		5.09	□□□□□ -1.59
LCB2	YDR062W	YIP5	P53108	310 aa		5.09	□□□□□ -1.59
LCB2	YDR062W	RIM8	P53179	542 aa		5.09	□□□□□ -1.59
LCB2	YDR062W	YGR126W	P53274	230 aa		5.09	□□□□□ -1.59
LCB2	YDR062W	YGR266W	P53326	701 aa		5.09	□□□□□ -1.59
LCB2	YDR062W	SMX3	P54999	86 aa	Predicted RBP	5.09	□□□□□ -1.59
LCB2	YDR062W	RSM23	Q01163	450 aa		5.09	□□□□□ -1.59
LCB2	YDR062W	ECM18	Q04623	453 aa		5.09	□□□□□ -1.59
LCB2	YDR062W	MDM20	Q12387	796 aa	Known RBP	5.09	□□□□□ -1.59
LCB2	YDR062W	LEU4	P06208	619 aa	Known RBP	5.08	□□□□□ -1.6
LCB2	YDR062W	RIP1	P08067	215 aa		5.08	□□□□□ -1.6
LCB2	YDR062W	CHO1	P08456	276 aa		5.08	□□□□□ -1.6
LCB2	YDR062W	PMI40	P29952	429 aa	Known RBP	5.08	□□□□□ -1.6
LCB2	YDR062W	TSA1	P34760	196 aa	Known RBP	5.08	□□□□□ -1.6
LCB2	YDR062W	PPS1	P38148	807 aa		5.08	□□□□□ -1.6
LCB2	YDR062W	YER130C	P39959	443 aa		5.08	□□□□□ -1.6
LCB2	YDR062W	RPS10B	P46784	105 aa	Known RBP	5.08	□□□□□ -1.6
LCB2	YDR062W	MPS2	P53159	387 aa		5.08	□□□□□ -1.6
LCB2	YDR062W	YDR541C	Q03049	344 aa		5.08	□□□□□ -1.6
LCB2	YDR062W	CWC21	Q03375	135 aa	Known RBP	5.08	□□□□□ -1.6
LCB2	YDR062W	APC5	Q08683	685 aa		5.08	□□□□□ -1.6
LCB2	YDR062W	NTO1	Q12311	748 aa		5.08	□□□□□ -1.6
LCB2	YDR062W	SRN2	Q99176	213 aa		5.08	□□□□□ -1.6
LCB2	YDR062W	RTC1	Q08281	1341 aa		5.08	□□□□□ -1.6
LCB2	YDR062W	VPS63	O13549	108 aa		5.08	□□□□□ -1.6
LCB2	YDR062W	PMA1	P05030	918 aa	Known RBP	5.08	□□□□□ -1.6
LCB2	YDR062W	MRP2	P10663	115 aa	Predicted RBP	5.08	□□□□□ -1.6
LCB2	YDR062W	TOD6	P34219	525 aa		5.08	□□□□□ -1.6
LCB2	YDR062W	HSM3	P38348	480 aa		5.08	□□□□□ -1.6
LCB2	YDR062W	CBR1	P38626	284 aa	Known RBP	5.08	□□□□□ -1.6
LCB2	YDR062W	LIN1	P38852	340 aa	Predicted RBP	5.08	□□□□□ -1.6
LCB2	YDR062W	YHR210C	P38893	341 aa		5.08	□□□□□ -1.6
LCB2	YDR062W	YFL015C	P43578	164 aa		5.08	□□□□□ -1.6
LCB2	YDR062W	PFA5	Q03289	374 aa		5.08	□□□□□ -1.6
LCB2	YDR062W	YDL057W	Q07379	328 aa		5.08	□□□□□ -1.6
LCB2	YDR062W	YLR040C	Q07988	224 aa		5.08	□□□□□ -1.6
LCB2	YDR062W	RRT8	Q08219	342 aa		5.08	□□□□□ -1.6
LCB2	YDR062W	RKM1	Q08961	583 aa	Predicted RBP	5.08	□□□□□ -1.6
LCB2	YDR062W	CDC37	P06101	506 aa	Known RBP	5.07	□□□□□ -1.6
LCB2	YDR062W	PEP4	P07267	405 aa	Known RBP	5.07	□□□□□ -1.6
LCB2	YDR062W	YMR085W	P0CF18	432 aa		5.07	□□□□□ -1.6
LCB2	YDR062W	ALG1	P16661	449 aa		5.07	□□□□□ -1.6
LCB2	YDR062W	SGV1	P23293	657 aa	Known RBP	5.07	□□□□□ -1.6
LCB2	YDR062W	MTR2	P34232	184 aa	Known RBP	5.07	□□□□□ -1.6
LCB2	YDR062W	MIT1	P40002	666 aa		5.07	□□□□□ -1.6
LCB2	YDR062W	ULP2	P40537	1034 aa	Predicted RBP	5.07	□□□□□ -1.6
LCB2	YDR062W	LAM5	P43560	674 aa		5.07	□□□□□ -1.6
LCB2	YDR062W	ASN2	P49090	572 aa	Known RBP	5.07	□□□□□ -1.6
LCB2	YDR062W	YPR003C	P53394	754 aa		5.07	□□□□□ -1.6
LCB2	YDR062W	HEF3	P53978	1044 aa	Known RBP	5.07	□□□□□ -1.6
LCB2	YDR062W	ADE13	Q05911	482 aa	Known RBP	5.07	□□□□□ -1.6
LCB2	YDR062W	CUR1	Q06469	252 aa		5.07	□□□□□ -1.6
LCB2	YDR062W	RAD34	Q06665	692 aa		5.07	□□□□□ -1.6
LCB2	YDR062W	MRPL23	Q12487	163 aa	Predicted RBP	5.07	□□□□□ -1.6
LCB2	YDR062W	SUP35	P05453	685 aa	Known RBP	5.06	□□□□□ -1.6
LCB2	YDR062W	PET18	P25362	215 aa		5.06	□□□□□ -1.6
LCB2	YDR062W	YJU2	P28320	278 aa	Predicted RBP	5.06	□□□□□ -1.6
LCB2	YDR062W	HRR25	P29295	494 aa	Known RBP	5.06	□□□□□ -1.6
LCB2	YDR062W	SIN4	P32259	974 aa		5.06	□□□□□ -1.6
LCB2	YDR062W	TRM2	P33753	639 aa		5.06	□□□□□ -1.6
LCB2	YDR062W	SHP1	P34223	423 aa		5.06	□□□□□ -1.6
LCB2	YDR062W	GLG1	P36143	616 aa		5.06	□□□□□ -1.6
LCB2	YDR062W	ATP3	P38077	311 aa	Known RBP	5.06	□□□□□ -1.6
LCB2	YDR062W	OLA1	P38219	394 aa	Known RBP	5.06	□□□□□ -1.6
LCB2	YDR062W	PCA1	P38360	1216 aa		5.06	□□□□□ -1.6
LCB2	YDR062W	YMR147W	P40218	223 aa	Known RBP	5.06	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms