RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeastyeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD2YDL190C YGR111WP53265 400 aa1.47□□□□□ -2.17
UFD2YDL190C BTN2P53286 410 aa1.47□□□□□ -2.17
UFD2YDL190C SMM1P53720 384 aaKnown RBP1.47□□□□□ -2.17
UFD2YDL190C SKO1Q02100 647 aa1.47□□□□□ -2.17
UFD2YDL190C ARP10Q04549 284 aa1.47□□□□□ -2.17
UFD2YDL190C RSF1Q05043 376 aa1.47□□□□□ -2.17
UFD2YDL190C YDR286CQ05530 114 aa1.47□□□□□ -2.17
UFD2YDL190C HEL2Q05580 639 aaKnown RBP1.47□□□□□ -2.17
UFD2YDL190C MCP2Q06567 569 aa1.47□□□□□ -2.17
UFD2YDL190C YDL218WQ07629 317 aa1.47□□□□□ -2.17
UFD2YDL190C COS7Q07788 383 aa1.47□□□□□ -2.17
UFD2YDL190C THP1Q08231 455 aa1.47□□□□□ -2.17
UFD2YDL190C SMF3Q12078 473 aaPredicted RBP1.47□□□□□ -2.17
UFD2YDL190C RRI1Q12468 440 aa1.47□□□□□ -2.17
UFD2YDL190C RAV1P47104 1357 aa1.47□□□□□ -2.17
UFD2YDL190C TY4B-JP47024 1803 aa1.47□□□□□ -2.17
UFD2YDL190C GAL4P04386 881 aa1.47□□□□□ -2.17
UFD2YDL190C YMR085WP0CF18 432 aa1.47□□□□□ -2.17
UFD2YDL190C TPM1P17536 199 aaKnown RBP1.47□□□□□ -2.17
UFD2YDL190C URA4P20051 364 aa1.47□□□□□ -2.17
UFD2YDL190C CNA1P23287 553 aa1.47□□□□□ -2.17
UFD2YDL190C NIP100P33420 868 aa1.47□□□□□ -2.17
UFD2YDL190C PIM1P36775 1133 aa1.47□□□□□ -2.17
UFD2YDL190C KEL1P38853 1164 aaKnown RBP1.47□□□□□ -2.17
UFD2YDL190C VRG4P40107 337 aa1.47□□□□□ -2.17
UFD2YDL190C SNO3P43544 222 aa1.47□□□□□ -2.17
UFD2YDL190C URB2P47108 1174 aa1.47□□□□□ -2.17
UFD2YDL190C HEF3P53978 1044 aaKnown RBP1.47□□□□□ -2.17
UFD2YDL190C SLG1P54867 378 aa1.47□□□□□ -2.17
UFD2YDL190C HOT1Q03213 719 aa1.47□□□□□ -2.17
UFD2YDL190C MMR1Q06324 491 aa1.47□□□□□ -2.17
UFD2YDL190C DCI1Q08558 271 aa1.47□□□□□ -2.17
UFD2YDL190C GEP3Q08622 556 aa1.47□□□□□ -2.17
UFD2YDL190C YOR365CQ08844 703 aa1.47□□□□□ -2.17
UFD2YDL190C RDR1Q08904 546 aa1.47□□□□□ -2.17
UFD2YDL190C VPS54Q12071 889 aa1.47□□□□□ -2.17
UFD2YDL190C NFI1Q12216 726 aa1.47□□□□□ -2.17
UFD2YDL190C PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
UFD2YDL190C RPN5Q12250 445 aaKnown RBP1.47□□□□□ -2.17
UFD2YDL190C FRE6Q12473 712 aa1.47□□□□□ -2.17
UFD2YDL190C RHO2P06781 192 aa1.46□□□□□ -2.18
UFD2YDL190C TOA1P32773 286 aa1.46□□□□□ -2.18
UFD2YDL190C LTV1P34078 463 aa1.46□□□□□ -2.18
UFD2YDL190C ARA1P38115 344 aa1.46□□□□□ -2.18
UFD2YDL190C BNA4P38169 460 aa1.46□□□□□ -2.18
UFD2YDL190C TCM62P38228 572 aaKnown RBP1.46□□□□□ -2.18
UFD2YDL190C LAG1P38703 411 aa1.46□□□□□ -2.18
UFD2YDL190C PHO90P39535 881 aa1.46□□□□□ -2.18
UFD2YDL190C TIF4631P39935 952 aaKnown RBP1.46□□□□□ -2.18
UFD2YDL190C SER3P40054 469 aa1.46□□□□□ -2.18
UFD2YDL190C NMD5P46970 1048 aa1.46□□□□□ -2.18
UFD2YDL190C OCA1P50946 238 aaPredicted RBP1.46□□□□□ -2.18
UFD2YDL190C PKP2P53170 491 aa1.46□□□□□ -2.18
UFD2YDL190C DRN1P53255 507 aaKnown RBP1.46□□□□□ -2.18
UFD2YDL190C SOL4P53315 255 aa1.46□□□□□ -2.18
UFD2YDL190C BUD32P53323 261 aa1.46□□□□□ -2.18
UFD2YDL190C IDP3P53982 420 aaKnown RBP1.46□□□□□ -2.18
UFD2YDL190C MEH1Q02205 184 aa1.46□□□□□ -2.18
UFD2YDL190C SHR3Q02774 210 aa1.46□□□□□ -2.18
UFD2YDL190C RSC9Q03124 581 aa1.46□□□□□ -2.18
UFD2YDL190C ACL4Q03771 387 aa1.46□□□□□ -2.18
UFD2YDL190C PGC1Q08959 321 aa1.46□□□□□ -2.18
UFD2YDL190C CFT2Q12102 859 aaPredicted RBP1.46□□□□□ -2.18
UFD2YDL190C TY4B-HP0C2J7 1802 aa1.46□□□□□ -2.18
UFD2YDL190C RAD52P06778 471 aaKnown RBP1.46□□□□□ -2.18
UFD2YDL190C PEP5P12868 1029 aa1.46□□□□□ -2.18
UFD2YDL190C CLN1P20437 546 aa1.46□□□□□ -2.18
UFD2YDL190C BRF1P29056 596 aa1.46□□□□□ -2.18
UFD2YDL190C RPN2P32565 945 aaKnown RBP1.46□□□□□ -2.18
UFD2YDL190C MSN2P33748 704 aa1.46□□□□□ -2.18
UFD2YDL190C HEL1P36113 551 aa1.46□□□□□ -2.18
UFD2YDL190C VPS25P47142 202 aa1.46□□□□□ -2.18
UFD2YDL190C ZPR1P53303 486 aaKnown RBP1.46□□□□□ -2.18
UFD2YDL190C EOS1P53938 366 aa1.46□□□□□ -2.18
UFD2YDL190C YPL107WQ02873 248 aa1.46□□□□□ -2.18
UFD2YDL190C CAC2Q04199 468 aa1.46□□□□□ -2.18
UFD2YDL190C YMR130WQ04223 302 aa1.46□□□□□ -2.18
UFD2YDL190C POS5Q06892 414 aa1.46□□□□□ -2.18
UFD2YDL190C UAF30Q08747 228 aa1.46□□□□□ -2.18
UFD2YDL190C VAM3Q12241 283 aa1.46□□□□□ -2.18
UFD2YDL190C PSK1P31374 1356 aa1.46□□□□□ -2.18
UFD2YDL190C GPH1P06738 902 aaKnown RBP1.45□□□□□ -2.18
UFD2YDL190C LPD1P09624 499 aaKnown RBP1.45□□□□□ -2.18
UFD2YDL190C RPL1AP0CX43 217 aaKnown RBP1.45□□□□□ -2.18
UFD2YDL190C RPL1BP0CX44 217 aaKnown RBP1.45□□□□□ -2.18
UFD2YDL190C CUP1-1P0CX80 61 aa1.45□□□□□ -2.18
UFD2YDL190C CUP1-2P0CX81 61 aa1.45□□□□□ -2.18
UFD2YDL190C KRR1P25586 316 aaPredicted RBP1.45□□□□□ -2.18
UFD2YDL190C HIR2P32480 875 aa1.45□□□□□ -2.18
UFD2YDL190C DUG2P38149 878 aa1.45□□□□□ -2.18
UFD2YDL190C MMS4P38257 691 aa1.45□□□□□ -2.18
UFD2YDL190C YMR147WP40218 223 aaKnown RBP1.45□□□□□ -2.18
UFD2YDL190C YJL132WP47014 750 aa1.45□□□□□ -2.18
UFD2YDL190C RMD9P53140 646 aaKnown RBP1.45□□□□□ -2.18
UFD2YDL190C RPT4P53549 437 aaKnown RBP1.45□□□□□ -2.18
UFD2YDL190C COP1P53622 1201 aaKnown RBP1.45□□□□□ -2.18
UFD2YDL190C KTR5P53966 522 aaPredicted RBP1.45□□□□□ -2.18
UFD2YDL190C YPL014WQ02606 381 aa1.45□□□□□ -2.18
UFD2YDL190C CTL1Q03220 320 aaKnown RBP1.45□□□□□ -2.18
UFD2YDL190C PRP42Q03776 544 aaKnown RBP1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms