RNA–Protein interactions for RNA: YDL025C

RTK1, Transcript of Putative protein kinase, potentially phosphorylated by Cdc28p, yeast

Gene RTK1, Length 1,863 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTK1	YDL025C	VHC1	P38329	1120 aa		4.19	□□□□□ -1.74
RTK1	YDL025C	ARP1	P38696	384 aa		4.19	□□□□□ -1.74
RTK1	YDL025C	RRF1	P38771	230 aa		4.19	□□□□□ -1.74
RTK1	YDL025C	FAD1	P38913	306 aa		4.19	□□□□□ -1.74
RTK1	YDL025C	YIL060W	P40519	144 aa		4.19	□□□□□ -1.74
RTK1	YDL025C	EPL1	P43572	832 aa		4.19	□□□□□ -1.74
RTK1	YDL025C	HEF3	P53978	1044 aa	Known RBP	4.19	□□□□□ -1.74
RTK1	YDL025C	CTF4	Q01454	927 aa		4.19	□□□□□ -1.74
RTK1	YDL025C	DBP9	Q06218	594 aa	Known RBP	4.19	□□□□□ -1.74
RTK1	YDL025C	PML1	Q07930	204 aa	Predicted RBP	4.19	□□□□□ -1.74
RTK1	YDL025C	DAP2	P18962	818 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	YKL023W	P36103	277 aa	Known RBP	4.18	□□□□□ -1.74
RTK1	YDL025C	ZTA1	P38230	334 aa	Known RBP	4.18	□□□□□ -1.74
RTK1	YDL025C	PFF1	P38244	976 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	APD1	P38281	316 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	ARN1	P38731	627 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	UBA4	P38820	440 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	YTA12	P40341	825 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	ULP2	P40537	1034 aa	Predicted RBP	4.18	□□□□□ -1.74
RTK1	YDL025C	NAS2	P40555	220 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	RPS0B	P46654	252 aa	Known RBP	4.18	□□□□□ -1.74
RTK1	YDL025C	ECM27	P47144	725 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	MRK1	P50873	501 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	PYK2	P52489	506 aa	Known RBP	4.18	□□□□□ -1.74
RTK1	YDL025C	RMD9	P53140	646 aa	Known RBP	4.18	□□□□□ -1.74
RTK1	YDL025C	ZPR1	P53303	486 aa	Known RBP	4.18	□□□□□ -1.74
RTK1	YDL025C	SMM1	P53720	384 aa	Known RBP	4.18	□□□□□ -1.74
RTK1	YDL025C	VTI1	Q04338	217 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	PIG1	Q06216	648 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	TPO3	Q06451	622 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	PDE2	P06776	526 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	SPO11	P23179	398 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	YEL043W	P32618	956 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	OAR1	P35731	278 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	STV1	P37296	890 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	BNA4	P38169	460 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	TCM62	P38228	572 aa	Known RBP	4.18	□□□□□ -1.74
RTK1	YDL025C	GDT1	P38301	280 aa	Predicted RBP	4.18	□□□□□ -1.74
RTK1	YDL025C	YHR210C	P38893	341 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	SLG1	P54867	378 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	SPH1	Q06160	661 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
RTK1	YDL025C	MTR10	Q99189	972 aa		4.18	□□□□□ -1.74
RTK1	YDL025C	RPB8	P20436	146 aa		4.17	□□□□□ -1.74
RTK1	YDL025C	KEL1	P38853	1164 aa	Known RBP	4.17	□□□□□ -1.74
RTK1	YDL025C	PAC2	P39937	518 aa		4.17	□□□□□ -1.74
RTK1	YDL025C	UBP8	P50102	471 aa		4.17	□□□□□ -1.74
RTK1	YDL025C	OCA2	P53949	197 aa		4.17	□□□□□ -1.74
RTK1	YDL025C	APM1	Q00776	475 aa	Predicted RBP	4.17	□□□□□ -1.74
RTK1	YDL025C	SHR3	Q02774	210 aa		4.17	□□□□□ -1.74
RTK1	YDL025C	PRP3	Q03338	469 aa	Predicted RBP	4.17	□□□□□ -1.74
RTK1	YDL025C	BSP1	Q06604	576 aa		4.17	□□□□□ -1.74
RTK1	YDL025C	APL5	Q08951	932 aa	Known RBP	4.17	□□□□□ -1.74
RTK1	YDL025C	BRR1	Q99177	341 aa	Predicted RBP	4.17	□□□□□ -1.74
RTK1	YDL025C	EDE1	P34216	1381 aa		4.17	□□□□□ -1.74
RTK1	YDL025C	CAT8	P39113	1433 aa		4.17	□□□□□ -1.74
RTK1	YDL025C	TY1B-A	O13527	1196 aa	Known RBP	4.16	□□□□□ -1.74
RTK1	YDL025C	BEM1	P29366	551 aa		4.16	□□□□□ -1.74
RTK1	YDL025C	VHS2	P40463	436 aa		4.16	□□□□□ -1.74
RTK1	YDL025C	YIL089W	P40500	205 aa		4.16	□□□□□ -1.74
RTK1	YDL025C	POP1	P41812	875 aa		4.16	□□□□□ -1.74
RTK1	YDL025C	CUE3	P53137	624 aa	Known RBP	4.16	□□□□□ -1.74
RTK1	YDL025C	RPN9	Q04062	393 aa	Known RBP	4.16	□□□□□ -1.74
RTK1	YDL025C	SWF1	Q04629	336 aa		4.16	□□□□□ -1.74
RTK1	YDL025C	RDR1	Q08904	546 aa		4.16	□□□□□ -1.74
RTK1	YDL025C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.16	□□□□□ -1.74
RTK1	YDL025C	GCN2	P15442	1659 aa		4.16	□□□□□ -1.74
RTK1	YDL025C	PDR5	P33302	1511 aa	Known RBP	4.16	□□□□□ -1.74
RTK1	YDL025C	CAR1	P00812	333 aa	Known RBP	4.15	□□□□□ -1.74
RTK1	YDL025C	PEP5	P12868	1029 aa		4.15	□□□□□ -1.74
RTK1	YDL025C	ARO3	P14843	370 aa	Known RBP	4.15	□□□□□ -1.74
RTK1	YDL025C	ATP10	P18496	279 aa		4.15	□□□□□ -1.74
RTK1	YDL025C	RRP1	P35178	278 aa	Predicted RBP	4.15	□□□□□ -1.74
RTK1	YDL025C	CHS6	P40955	746 aa		4.15	□□□□□ -1.74
RTK1	YDL025C	BUD32	P53323	261 aa		4.15	□□□□□ -1.74
RTK1	YDL025C	YNR068C	P53754	272 aa		4.15	□□□□□ -1.74
RTK1	YDL025C	RAD52	P06778	471 aa	Known RBP	4.15	□□□□□ -1.75
RTK1	YDL025C	RIP1	P08067	215 aa		4.15	□□□□□ -1.75
RTK1	YDL025C	SGV1	P23293	657 aa	Known RBP	4.15	□□□□□ -1.75
RTK1	YDL025C	RIM1	P32445	135 aa	Known RBP	4.15	□□□□□ -1.75
RTK1	YDL025C	MRPL4	P36517	319 aa		4.15	□□□□□ -1.75
RTK1	YDL025C	VRG4	P40107	337 aa		4.15	□□□□□ -1.75
RTK1	YDL025C	PCL7	P40186	285 aa		4.15	□□□□□ -1.75
RTK1	YDL025C	IRC7	P43623	340 aa		4.15	□□□□□ -1.75
RTK1	YDL025C	AQR1	P53943	586 aa		4.15	□□□□□ -1.75
RTK1	YDL025C	YOR365C	Q08844	703 aa		4.15	□□□□□ -1.75
RTK1	YDL025C	PFA4	Q12006	378 aa		4.15	□□□□□ -1.75
RTK1	YDL025C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
RTK1	YDL025C	YLR111W	Q12528	110 aa		4.15	□□□□□ -1.75
RTK1	YDL025C	NUM1	Q00402	2748 aa		4.14	□□□□□ -1.75
RTK1	YDL025C	PMR1	P13586	950 aa		4.14	□□□□□ -1.75
RTK1	YDL025C	RHB1	P25378	209 aa		4.14	□□□□□ -1.75
RTK1	YDL025C	KRE2	P27809	442 aa		4.14	□□□□□ -1.75
RTK1	YDL025C	MSN2	P33748	704 aa		4.14	□□□□□ -1.75
RTK1	YDL025C	ASC1	P38011	319 aa	Known RBP	4.14	□□□□□ -1.75
RTK1	YDL025C	DUG2	P38149	878 aa		4.14	□□□□□ -1.75
RTK1	YDL025C	MLH1	P38920	769 aa		4.14	□□□□□ -1.75
RTK1	YDL025C	YMR147W	P40218	223 aa	Known RBP	4.14	□□□□□ -1.75
RTK1	YDL025C	HXT9	P40885	567 aa		4.14	□□□□□ -1.75
RTK1	YDL025C	TAX4	P47030	604 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms