RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W MPS3P47069 682 aa4.81□□□□□ -1.64
CDC28YBR160W ATP22P50273 684 aaPredicted RBP4.81□□□□□ -1.64
CDC28YBR160W PEX8P53248 589 aa4.81□□□□□ -1.64
CDC28YBR160W TWF1P53250 332 aa4.81□□□□□ -1.64
CDC28YBR160W COP1P53622 1201 aaKnown RBP4.81□□□□□ -1.64
CDC28YBR160W LSM3P57743 89 aaKnown RBP4.81□□□□□ -1.64
CDC28YBR160W SNP1Q00916 300 aaPredicted RBP4.81□□□□□ -1.64
CDC28YBR160W MET14Q02196 202 aa4.81□□□□□ -1.64
CDC28YBR160W TOF2Q02208 771 aa4.81□□□□□ -1.64
CDC28YBR160W ABZ2Q03266 374 aa4.81□□□□□ -1.64
CDC28YBR160W NHX1Q04121 633 aa4.81□□□□□ -1.64
CDC28YBR160W HPT1Q04178 221 aaKnown RBP4.81□□□□□ -1.64
CDC28YBR160W ARP10Q04549 284 aa4.81□□□□□ -1.64
CDC28YBR160W SYO1Q07395 620 aa4.81□□□□□ -1.64
CDC28YBR160W NGL1Q08213 363 aaKnown RBP4.81□□□□□ -1.64
CDC28YBR160W HFI1Q12060 488 aa4.81□□□□□ -1.64
CDC28YBR160W YPR027CQ12079 277 aa4.81□□□□□ -1.64
CDC28YBR160W LAS17Q12446 633 aa4.81□□□□□ -1.64
CDC28YBR160W MET17P06106 444 aa4.8□□□□□ -1.64
CDC28YBR160W CHS1P08004 1131 aa4.8□□□□□ -1.64
CDC28YBR160W RSR1P13856 272 aa4.8□□□□□ -1.64
CDC28YBR160W CLN1P20437 546 aa4.8□□□□□ -1.64
CDC28YBR160W CCA1P21269 546 aa4.8□□□□□ -1.64
CDC28YBR160W CMK1P27466 446 aaKnown RBP4.8□□□□□ -1.64
CDC28YBR160W PRP21P32524 280 aaPredicted RBP4.8□□□□□ -1.64
CDC28YBR160W UTR4P32626 227 aa4.8□□□□□ -1.64
CDC28YBR160W SPC34P36131 295 aa4.8□□□□□ -1.64
CDC28YBR160W ECM13P38195 257 aa4.8□□□□□ -1.64
CDC28YBR160W FMP23P38231 175 aa4.8□□□□□ -1.64
CDC28YBR160W YBR071WP38243 211 aa4.8□□□□□ -1.64
CDC28YBR160W HSL7P38274 827 aa4.8□□□□□ -1.64
CDC28YBR160W BIT2P38346 545 aa4.8□□□□□ -1.64
CDC28YBR160W FAD1P38913 306 aa4.8□□□□□ -1.64
CDC28YBR160W SOP4P39543 234 aaPredicted RBP4.8□□□□□ -1.64
CDC28YBR160W RBG1P39729 369 aa4.8□□□□□ -1.64
CDC28YBR160W YJR096WP47137 282 aa4.8□□□□□ -1.64
CDC28YBR160W MTR3P48240 250 aaPredicted RBP4.8□□□□□ -1.64
CDC28YBR160W PRP38Q00723 242 aaPredicted RBP4.8□□□□□ -1.64
CDC28YBR160W KIN4Q01919 800 aa4.8□□□□□ -1.64
CDC28YBR160W SLU7Q02775 382 aaKnown RBP4.8□□□□□ -1.64
CDC28YBR160W YPL107WQ02873 248 aa4.8□□□□□ -1.64
CDC28YBR160W GAS3Q03655 524 aa4.8□□□□□ -1.64
CDC28YBR160W FIN1Q03898 291 aa4.8□□□□□ -1.64
CDC28YBR160W CSN9Q03981 162 aa4.8□□□□□ -1.64
CDC28YBR160W PEX12Q04370 399 aa4.8□□□□□ -1.64
CDC28YBR160W SSL1Q04673 461 aaPredicted RBP4.8□□□□□ -1.64
CDC28YBR160W ECM38Q05902 660 aaPredicted RBP4.8□□□□□ -1.64
CDC28YBR160W MDM36Q06820 579 aa4.8□□□□□ -1.64
CDC28YBR160W YOL159CQ08300 171 aa4.8□□□□□ -1.64
CDC28YBR160W UAF30Q08747 228 aa4.8□□□□□ -1.64
CDC28YBR160W YTM1Q12024 460 aaPredicted RBP4.8□□□□□ -1.64
CDC28YBR160W TRM10Q12400 293 aa4.8□□□□□ -1.64
CDC28YBR160W ERP3Q12403 225 aa4.8□□□□□ -1.64
CDC28YBR160W EFG1Q3E705 233 aaKnown RBP4.8□□□□□ -1.64
CDC28YBR160W RPS9AO13516 197 aaKnown RBP4.79□□□□□ -1.64
CDC28YBR160W THP2O13539 261 aaKnown RBP4.79□□□□□ -1.64
CDC28YBR160W CDC31P06704 161 aaKnown RBP4.79□□□□□ -1.64
CDC28YBR160W GPH1P06738 902 aaKnown RBP4.79□□□□□ -1.64
CDC28YBR160W RPL4AP10664 362 aaKnown RBP4.79□□□□□ -1.64
CDC28YBR160W MSM1P22438 575 aa4.79□□□□□ -1.64
CDC28YBR160W TRX2P22803 104 aaKnown RBP4.79□□□□□ -1.64
CDC28YBR160W HCM1P25364 564 aa4.79□□□□□ -1.64
CDC28YBR160W PUP3P25451 205 aaKnown RBP4.79□□□□□ -1.64
CDC28YBR160W PTC6P25646 442 aa4.79□□□□□ -1.64
CDC28YBR160W BUB2P26448 306 aaPredicted RBP4.79□□□□□ -1.64
CDC28YBR160W NDI1P32340 513 aa4.79□□□□□ -1.64
CDC28YBR160W RPC34P32910 317 aa4.79□□□□□ -1.64
CDC28YBR160W HCS1P34243 683 aa4.79□□□□□ -1.64
CDC28YBR160W ASK1P35734 292 aa4.79□□□□□ -1.64
CDC28YBR160W YBL029WP38201 376 aa4.79□□□□□ -1.64
CDC28YBR160W REG2P38232 338 aa4.79□□□□□ -1.64
CDC28YBR160W SLX1P38324 304 aa4.79□□□□□ -1.64
CDC28YBR160W MTG2P38860 518 aa4.79□□□□□ -1.64
CDC28YBR160W HXT6P39003 570 aaKnown RBP4.79□□□□□ -1.64
CDC28YBR160W HXT7P39004 570 aa4.79□□□□□ -1.64
CDC28YBR160W FHL1P39521 936 aa4.79□□□□□ -1.64
CDC28YBR160W COA1P40452 197 aa4.79□□□□□ -1.64
CDC28YBR160W PRM2P40534 656 aa4.79□□□□□ -1.64
CDC28YBR160W SHR5P41912 237 aa4.79□□□□□ -1.64
CDC28YBR160W GCD14P46959 383 aaPredicted RBP4.79□□□□□ -1.64
CDC28YBR160W MSE1P48525 536 aa4.79□□□□□ -1.64
CDC28YBR160W RPL4BP49626 362 aaKnown RBP4.79□□□□□ -1.64
CDC28YBR160W NAS6P50086 228 aa4.79□□□□□ -1.64
CDC28YBR160W SPC105P53148 917 aa4.79□□□□□ -1.64
CDC28YBR160W GTR2P53290 341 aa4.79□□□□□ -1.64
CDC28YBR160W YNR068CP53754 272 aa4.79□□□□□ -1.64
CDC28YBR160W SLG1P54867 378 aa4.79□□□□□ -1.64
CDC28YBR160W SPR6Q01684 191 aa4.79□□□□□ -1.64
CDC28YBR160W TRM12Q04235 462 aa4.79□□□□□ -1.64
CDC28YBR160W ARP9Q05123 467 aa4.79□□□□□ -1.64
CDC28YBR160W COA4Q05809 96 aa4.79□□□□□ -1.64
CDC28YBR160W DTD1Q07648 150 aaKnown RBP4.79□□□□□ -1.64
CDC28YBR160W YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64not detected
CDC28YBR160W APC5Q08683 685 aa4.79□□□□□ -1.64
CDC28YBR160W GUP2Q08929 609 aa4.79□□□□□ -1.64
CDC28YBR160W PFK27Q12471 397 aaPredicted RBP4.79□□□□□ -1.64
CDC28YBR160W ZPS1Q12512 249 aa4.79□□□□□ -1.64
CDC28YBR160W DCP1Q12517 231 aaPredicted RBP4.79□□□□□ -1.64
CDC28YBR160W CSR2Q12734 1121 aa4.79□□□□□ -1.64
CDC28YBR160W YPL119C-AQ3E751 87 aa4.79□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms