RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 YMR087WQ04299 284 aa8.01□□□□□ -1.13
NME1NME1 GYL1Q04322 720 aa8.01□□□□□ -1.13
NME1NME1 KEL3Q08979 651 aaPredicted RBP8.01□□□□□ -1.13
NME1NME1 CAR1P00812 333 aaKnown RBP8□□□□□ -1.13
NME1NME1 URA4P20051 364 aa8□□□□□ -1.13
NME1NME1 SLM4P38247 162 aa8□□□□□ -1.13
NME1NME1 JEM1P40358 645 aa8□□□□□ -1.13
NME1NME1 TES1P41903 349 aaKnown RBP8□□□□□ -1.13
NME1NME1 BNA5Q05979 453 aa8□□□□□ -1.13
NME1NME1 VPS54Q12071 889 aa8□□□□□ -1.13
NME1NME1 RRD2Q12461 358 aa8□□□□□ -1.13
NME1NME1 CTF3Q12748 733 aa8□□□□□ -1.13
NME1NME1 PPZ1P26570 692 aa7.99□□□□□ -1.13
NME1NME1 MMS4P38257 691 aa7.99□□□□□ -1.13
NME1NME1 VPS52P39904 641 aa7.99□□□□□ -1.13
NME1NME1 FAU1P40099 211 aa7.99□□□□□ -1.13
NME1NME1 YJL055WP47044 245 aa7.99□□□□□ -1.13
NME1NME1 YMR130WQ04223 302 aa7.99□□□□□ -1.13
NME1NME1 SRL1Q08673 210 aa7.99□□□□□ -1.13
NME1NME1 YDL009CQ12210 107 aa7.99□□□□□ -1.13
NME1NME1 HIP1P06775 603 aa7.98□□□□□ -1.13
NME1NME1 BRF1P29056 596 aa7.98□□□□□ -1.13
NME1NME1 HIR2P32480 875 aa7.98□□□□□ -1.13
NME1NME1 RPS0BP46654 252 aaKnown RBP7.98□□□□□ -1.13
NME1NME1 ACL4Q03771 387 aa7.98□□□□□ -1.13
NME1NME1 MRPL51Q06090 140 aaPredicted RBP7.98□□□□□ -1.13
NME1NME1 SYO1Q07395 620 aa7.98□□□□□ -1.13
NME1NME1 MED2Q12124 431 aa7.98□□□□□ -1.13
NME1NME1 YLR278CQ05854 1341 aa7.98□□□□□ -1.13
NME1NME1 MNE1P24720 663 aa7.97□□□□□ -1.13
NME1NME1 KRE2P27809 442 aa7.97□□□□□ -1.13
NME1NME1 PRP21P32524 280 aaPredicted RBP7.97□□□□□ -1.13
NME1NME1 BZZ1P38822 633 aa7.97□□□□□ -1.13
NME1NME1 LCB2P40970 561 aa7.97□□□□□ -1.13
NME1NME1 DIM1P41819 318 aaKnown RBP7.97□□□□□ -1.13
NME1NME1 YGR111WP53265 400 aa7.97□□□□□ -1.13
NME1NME1 KTR5P53966 522 aaPredicted RBP7.97□□□□□ -1.13
NME1NME1 IRC15Q02733 499 aa7.97□□□□□ -1.13
NME1NME1 OAZ1Q02803 292 aa7.97□□□□□ -1.13
NME1NME1 MMR1Q06324 491 aa7.97□□□□□ -1.13
NME1NME1 GPM3Q12326 303 aa7.97□□□□□ -1.13
NME1NME1 RKM5Q12367 367 aa7.97□□□□□ -1.13
NME1NME1 AMD1P15274 810 aaKnown RBP7.96□□□□□ -1.14
NME1NME1 BEM1P29366 551 aa7.96□□□□□ -1.14
NME1NME1 SWI3P32591 825 aa7.96□□□□□ -1.14
NME1NME1 DSL1P53847 754 aa7.96□□□□□ -1.14
NME1NME1 HSP31Q04432 237 aa7.96□□□□□ -1.14
NME1NME1 VPS74Q06385 345 aa7.96□□□□□ -1.14
NME1NME1 PAR32Q12515 295 aaKnown RBP7.96□□□□□ -1.14
NME1NME1 CLN1P20437 546 aa7.95□□□□□ -1.14
NME1NME1 BUB3P26449 341 aa7.95□□□□□ -1.14
NME1NME1 ELP2P42935 788 aa7.95□□□□□ -1.14
NME1NME1 SAD1P43589 448 aa7.95□□□□□ -1.14
NME1NME1 MPS1P54199 764 aa7.95□□□□□ -1.14
NME1NME1 YPL068CQ02749 293 aa7.95□□□□□ -1.14
NME1NME1 MDL1P33310 695 aa7.94□□□□□ -1.14
NME1NME1 SIP2P34164 415 aaKnown RBP7.94□□□□□ -1.14
NME1NME1 RIM2P38127 377 aa7.94□□□□□ -1.14
NME1NME1 GDI1P39958 451 aaKnown RBP7.94□□□□□ -1.14
NME1NME1 MDG1P53885 366 aa7.94□□□□□ -1.14
NME1NME1 RLI1Q03195 608 aaKnown RBP7.94□□□□□ -1.14
NME1NME1 HEL2Q05580 639 aaKnown RBP7.94□□□□□ -1.14
NME1NME1 DCS1Q06151 350 aa7.94□□□□□ -1.14
NME1NME1 DIS3Q08162 1001 aaKnown RBP7.94□□□□□ -1.14
NME1NME1 SIN4P32259 974 aa7.93□□□□□ -1.14
NME1NME1 LTV1P34078 463 aa7.93□□□□□ -1.14
NME1NME1 CCT2P39076 527 aaKnown RBP7.93□□□□□ -1.14
NME1NME1 IKS1P47042 667 aa7.93□□□□□ -1.14
NME1NME1 RPT4P53549 437 aaKnown RBP7.93□□□□□ -1.14
NME1NME1 DCI1Q08558 271 aa7.93□□□□□ -1.14
NME1NME1 SPO7P18410 259 aa7.92□□□□□ -1.14
NME1NME1 RHB1P25378 209 aa7.92□□□□□ -1.14
NME1NME1 RSM22P36056 628 aa7.92□□□□□ -1.14
NME1NME1 YND1P40009 630 aa7.92□□□□□ -1.14
NME1NME1 SPE3Q12074 293 aaKnown RBP7.92□□□□□ -1.14
NME1NME1 RKM1Q08961 583 aaPredicted RBP7.91□□□□□ -1.14
NME1NME1 AEP3Q12089 606 aa7.91□□□□□ -1.14
NME1NME1 SEC63P14906 663 aa7.9□□□□□ -1.14
NME1NME1 PTR2P32901 601 aa7.9□□□□□ -1.14
NME1NME1 YJR011CP47086 261 aaPredicted RBP7.9□□□□□ -1.14
NME1NME1 YDR387CQ04162 555 aa7.9□□□□□ -1.14
NME1NME1 RPI1P23250 407 aaKnown RBP7.89□□□□□ -1.15
NME1NME1 APE2P32454 952 aaKnown RBP7.89□□□□□ -1.15
NME1NME1 YHR054CP38780 354 aa7.89□□□□□ -1.15
NME1NME1 ISC1P40015 477 aaKnown RBP7.89□□□□□ -1.15
NME1NME1 SAS2P40963 338 aa7.89□□□□□ -1.15
NME1NME1 YIF1P53845 314 aaKnown RBP7.89□□□□□ -1.15
NME1NME1 NUP53Q03790 475 aa7.89□□□□□ -1.15
NME1NME1 MDM30Q05930 598 aa7.89□□□□□ -1.15
NME1NME1 MTR10Q99189 972 aa7.89□□□□□ -1.15
NME1NME1 TMT1P32643 299 aa7.88□□□□□ -1.15
NME1NME1 FRE2P36033 711 aa7.88□□□□□ -1.15
NME1NME1 RFC3P38629 340 aa7.88□□□□□ -1.15
NME1NME1 SER3P40054 469 aa7.88□□□□□ -1.15
NME1NME1 SEC28P40509 296 aaKnown RBP7.88□□□□□ -1.15
NME1NME1 YJL132WP47014 750 aa7.88□□□□□ -1.15
NME1NME1 LSC1P53598 329 aaKnown RBP7.88□□□□□ -1.15
NME1NME1 ICT1Q12385 394 aa7.88□□□□□ -1.15
NME1NME1 CDC23P16522 626 aa7.87□□□□□ -1.15
NME1NME1 GEX1P25596 615 aa7.87□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms