RNA–Protein interactions for RNA: ENST00000590922.1

GFAP-217, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-217ENST00000590922 BRWD1Q9NSI6 2320 aa12.78□□□□□ -0.36
GFAP-217ENST00000590922 ERICH2A1L162 156 aa12.77□□□□□ -0.37
GFAP-217ENST00000590922 KIF28PB7ZC32 967 aa12.77□□□□□ -0.37
GFAP-217ENST00000590922 PRC1O43663 620 aa12.77□□□□□ -0.37
GFAP-217ENST00000590922 PARP1P09874 1014 aaKnown RBP12.77□□□□□ -0.37
GFAP-217ENST00000590922 CPT1AP50416 773 aa12.77□□□□□ -0.37
GFAP-217ENST00000590922 PURAQ00577 322 aaKnown RBP12.77□□□□□ -0.37
GFAP-217ENST00000590922 TAP1Q03518 808 aa12.77□□□□□ -0.37
GFAP-217ENST00000590922 SART3Q15020 963 aaKnown RBP12.77□□□□□ -0.37
GFAP-217ENST00000590922 KRT40Q6A162 431 aa12.77□□□□□ -0.37
GFAP-217ENST00000590922 NSMFQ6X4W1 530 aa12.77□□□□□ -0.37
GFAP-217ENST00000590922 STAG2Q8N3U4 1231 aa12.77□□□□□ -0.37
GFAP-217ENST00000590922 CCPG1Q9ULG6 757 aa12.77□□□□□ -0.37
GFAP-217ENST00000590922 SCN10AQ9Y5Y9 1956 aa12.77□□□□□ -0.37
GFAP-217ENST00000590922 PIEZO1Q92508 2521 aa12.77□□□□□ -0.37
GFAP-217ENST00000590922 TANC1Q9C0D5 1861 aa12.76□□□□□ -0.37
GFAP-217ENST00000590922 TET1Q8NFU7 2136 aa12.76□□□□□ -0.37
GFAP-217ENST00000590922 PITPNM1O00562 1244 aa12.76□□□□□ -0.37
GFAP-217ENST00000590922 ICAM1P05362 532 aa12.76□□□□□ -0.37
GFAP-217ENST00000590922 MYL3P08590 195 aa12.76□□□□□ -0.37
GFAP-217ENST00000590922 MCM5P33992 734 aa12.76□□□□□ -0.37
GFAP-217ENST00000590922 ASPRV1Q53RT3 343 aa12.76□□□□□ -0.37
GFAP-217ENST00000590922 RNF20Q5VTR2 975 aa12.76□□□□□ -0.37
GFAP-217ENST00000590922 HERC6Q8IVU3 1022 aa12.76□□□□□ -0.37
GFAP-217ENST00000590922 RETREG2Q8NC44 543 aa12.76□□□□□ -0.37
GFAP-217ENST00000590922 MTG1Q9BT17 334 aaPredicted RBP12.76□□□□□ -0.37
GFAP-217ENST00000590922 LRRC2Q9BYS8 371 aa12.76□□□□□ -0.37
GFAP-217ENST00000590922 WDR11Q9BZH6 1224 aa12.76□□□□□ -0.37
GFAP-217ENST00000590922 LY9Q9HBG7 655 aa12.76□□□□□ -0.37
GFAP-217ENST00000590922 TRIP12Q14669 1992 aaPredicted RBP12.76□□□□□ -0.37
GFAP-217ENST00000590922 MUC6Q6W4X9 2439 aa12.76□□□□□ -0.37
GFAP-217ENST00000590922 LOC102724159A0A0B4J2E5 919 aa12.75□□□□□ -0.37
GFAP-217ENST00000590922 GPR37L1O60883 481 aa12.75□□□□□ -0.37
GFAP-217ENST00000590922 ARHGEF15O94989 841 aa12.75□□□□□ -0.37
GFAP-217ENST00000590922 IQCF3P0C7M6 154 aa12.75□□□□□ -0.37
GFAP-217ENST00000590922 GRB10Q13322 594 aa12.75□□□□□ -0.37
GFAP-217ENST00000590922 PWP2Q15269 919 aaKnown RBP12.75□□□□□ -0.37
GFAP-217ENST00000590922 NBPF20Q3BBV1 942 aa12.75□□□□□ -0.37
GFAP-217ENST00000590922 ADCK5Q3MIX3 580 aa12.75□□□□□ -0.37
GFAP-217ENST00000590922 BRDTQ58F21 947 aaPredicted RBP12.75□□□□□ -0.37
GFAP-217ENST00000590922 FAM47CQ5HY64 1035 aa12.75□□□□□ -0.37
GFAP-217ENST00000590922 NFRKBQ6P4R8 1299 aa12.75□□□□□ -0.37
GFAP-217ENST00000590922 ADGRF4Q8IZF3 695 aa12.75□□□□□ -0.37
GFAP-217ENST00000590922 PURBQ96QR8 312 aaKnown RBP12.75□□□□□ -0.37
GFAP-217ENST00000590922 FTOQ9C0B1 505 aaKnown RBP eCLIP12.75□□□□□ -0.37
GFAP-217ENST00000590922 VAT1LQ9HCJ6 419 aa12.75□□□□□ -0.37
GFAP-217ENST00000590922 ADD3Q9UEY8 706 aaKnown RBP12.75□□□□□ -0.37
GFAP-217ENST00000590922 MAD2L2Q9UI95 211 aa12.75□□□□□ -0.37
GFAP-217ENST00000590922 COL4A4P53420 1690 aaPredicted RBP12.74□□□□□ -0.37
GFAP-217ENST00000590922 PALM3A6NDB9 673 aaPredicted RBP12.74□□□□□ -0.37
GFAP-217ENST00000590922 KLRF2D3W0D1 207 aa12.74□□□□□ -0.37
GFAP-217ENST00000590922 SH2B2O14492 632 aaPredicted RBP12.74□□□□□ -0.37
GFAP-217ENST00000590922 DHX16O60231 1041 aaKnown RBP12.74□□□□□ -0.37
GFAP-217ENST00000590922 BAIAP3O94812 1187 aa12.74□□□□□ -0.37
GFAP-217ENST00000590922 ALDH5A1P51649 535 aaPredicted RBP12.74□□□□□ -0.37
GFAP-217ENST00000590922 TROAPQ12815 778 aa12.74□□□□□ -0.37
GFAP-217ENST00000590922 BFSP2Q13515 415 aa12.74□□□□□ -0.37
GFAP-217ENST00000590922 BAATQ14032 418 aaPredicted RBP12.74□□□□□ -0.37
GFAP-217ENST00000590922 GRM4Q14833 912 aa12.74□□□□□ -0.37
GFAP-217ENST00000590922 CDC37Q16543 378 aaPredicted RBP12.74□□□□□ -0.37
GFAP-217ENST00000590922 SLC35G1Q2M3R5 365 aa12.74□□□□□ -0.37
GFAP-217ENST00000590922 TSGA10IPQ3SY00 556 aa12.74□□□□□ -0.37
GFAP-217ENST00000590922 OR6J1Q8NGC5 347 aa12.74□□□□□ -0.37
GFAP-217ENST00000590922 TCEANC2Q96MN5 208 aa12.74□□□□□ -0.37
GFAP-217ENST00000590922 NEK1Q96PY6 1258 aa12.74□□□□□ -0.37
GFAP-217ENST00000590922 MYL10Q9BUA6 226 aa12.74□□□□□ -0.37
GFAP-217ENST00000590922 JMJD4Q9H9V9 463 aa12.74□□□□□ -0.37
GFAP-217ENST00000590922 C11orf16Q9NQ32 467 aa12.74□□□□□ -0.37
GFAP-217ENST00000590922 PTPRSQ13332 1948 aa12.73□□□□□ -0.37
GFAP-217ENST00000590922 RBM47A0AV96 593 aaKnown RBP12.73□□□□□ -0.37
GFAP-217ENST00000590922 NFIBO00712 420 aa12.73□□□□□ -0.37
GFAP-217ENST00000590922 KPNA6O60684 536 aa12.73□□□□□ -0.37
GFAP-217ENST00000590922 LPXNO60711 386 aa12.73□□□□□ -0.37
GFAP-217ENST00000590922 REC8O95072 547 aa12.73□□□□□ -0.37
GFAP-217ENST00000590922 HSPA4P34932 840 aa12.73□□□□□ -0.37
GFAP-217ENST00000590922 KCNJ6P48051 423 aa12.73□□□□□ -0.37
GFAP-217ENST00000590922 PTPN11Q06124 597 aaPredicted RBP12.73□□□□□ -0.37
GFAP-217ENST00000590922 QRICH1Q2TAL8 776 aa12.73□□□□□ -0.37
GFAP-217ENST00000590922 USH1GQ495M9 461 aa12.73□□□□□ -0.37
GFAP-217ENST00000590922 NFXL1Q6ZNB6 911 aa12.73□□□□□ -0.37
GFAP-217ENST00000590922 CATIPQ7Z7H3 387 aa12.73□□□□□ -0.37
GFAP-217ENST00000590922 RAB11FIP4Q86YS3 637 aa12.73□□□□□ -0.37
GFAP-217ENST00000590922 ZNF654Q8IZM8 581 aa12.73□□□□□ -0.37
GFAP-217ENST00000590922 CLEC4DQ8WXI8 215 aa12.73□□□□□ -0.37
GFAP-217ENST00000590922 KHSRPQ92945 711 aaKnown RBP eCLIP12.73□□□□□ -0.37
GFAP-217ENST00000590922 KCNB2Q92953 911 aa12.73□□□□□ -0.37
GFAP-217ENST00000590922 TMEM87BQ96K49 555 aa12.73□□□□□ -0.37
GFAP-217ENST00000590922 MTA3Q9BTC8 594 aa12.73□□□□□ -0.37
GFAP-217ENST00000590922 LMCD1Q9NZU5 365 aa12.73□□□□□ -0.37
GFAP-217ENST00000590922 NOD1Q9Y239 953 aa12.73□□□□□ -0.37
GFAP-217ENST00000590922 SNX14Q9Y5W7 946 aa12.73□□□□□ -0.37
GFAP-217ENST00000590922 MYH6P13533 1939 aa12.72□□□□□ -0.37
GFAP-217ENST00000590922 WDR19Q8NEZ3 1342 aa12.72□□□□□ -0.37
GFAP-217ENST00000590922 PTPDC1A2A3K4 754 aa12.72□□□□□ -0.37
GFAP-217ENST00000590922 FAM86C2PA6NEL3 165 aa12.72□□□□□ -0.37
GFAP-217ENST00000590922 NKRFO15226 690 aaKnown RBP eCLIP12.72□□□□□ -0.37
GFAP-217ENST00000590922 CPA1P15085 419 aa12.72□□□□□ -0.37
GFAP-217ENST00000590922 RXRAP19793 462 aa12.72□□□□□ -0.37
GFAP-217ENST00000590922 EXOSC10Q01780 885 aaKnown RBP12.72□□□□□ -0.37
GFAP-217ENST00000590922 PPP2R5BQ15173 497 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms