RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 HOXA13P31271 388 aaPredicted RBP23.49■■□□□ 1.35
SLC48A1-208ENST00000551301 CCL23P55773 120 aa23.49■■□□□ 1.35
SLC48A1-208ENST00000551301 LAMC2Q13753 1193 aa23.49■■□□□ 1.35
SLC48A1-208ENST00000551301 DGKDQ16760 1214 aa23.49■■□□□ 1.35
SLC48A1-208ENST00000551301 AFG1LQ8WV93 481 aa23.49■■□□□ 1.35
SLC48A1-208ENST00000551301 PDCD2LQ9BRP1 358 aa23.49■■□□□ 1.35
SLC48A1-208ENST00000551301 SEMA6BQ9H3T3 888 aa23.49■■□□□ 1.35
SLC48A1-208ENST00000551301 LY9Q9HBG7 655 aa23.49■■□□□ 1.35
SLC48A1-208ENST00000551301 TRMT13Q9NUP7 481 aaKnown RBP23.49■■□□□ 1.35
SLC48A1-208ENST00000551301 OPLAHO14841 1288 aa23.48■■□□□ 1.35
SLC48A1-208ENST00000551301 SMARCA1P28370 1054 aa23.48■■□□□ 1.35
SLC48A1-208ENST00000551301 CCND2P30279 289 aa23.48■■□□□ 1.35
SLC48A1-208ENST00000551301 CREB3L3Q68CJ9 461 aa23.48■■□□□ 1.35
SLC48A1-208ENST00000551301 FCHSD1Q86WN1 690 aa23.48■■□□□ 1.35
SLC48A1-208ENST00000551301 DHX37Q8IY37 1157 aaKnown RBP23.48■■□□□ 1.35
SLC48A1-208ENST00000551301 RETREG2Q8NC44 543 aa23.48■■□□□ 1.35
SLC48A1-208ENST00000551301 PIBF1Q8WXW3 757 aa23.48■■□□□ 1.35
SLC48A1-208ENST00000551301 SPZ1Q9BXG8 430 aa23.48■■□□□ 1.35
SLC48A1-208ENST00000551301 DDX41Q9UJV9 622 aaKnown RBP23.48■■□□□ 1.35
SLC48A1-208ENST00000551301 KIAA1217Q5T5P2 1943 aa23.47■■□□□ 1.35
SLC48A1-208ENST00000551301 CYTH3O43739 400 aa23.47■■□□□ 1.35
SLC48A1-208ENST00000551301 MMP3P08254 477 aa23.47■■□□□ 1.35
SLC48A1-208ENST00000551301 ARHGAP1Q07960 439 aa23.47■■□□□ 1.35
SLC48A1-208ENST00000551301 SYNE3Q6ZMZ3 975 aa23.47■■□□□ 1.35
SLC48A1-208ENST00000551301 C16orf59Q7L2K0 433 aa23.47■■□□□ 1.35
SLC48A1-208ENST00000551301 CUL5Q93034 780 aa23.47■■□□□ 1.35
SLC48A1-208ENST00000551301 EMID1Q96A84 441 aaPredicted RBP23.47■■□□□ 1.35
SLC48A1-208ENST00000551301 GUCD1Q96NT3 240 aa23.47■■□□□ 1.35
SLC48A1-208ENST00000551301 PFKMP08237 780 aa23.46■■□□□ 1.35
SLC48A1-208ENST00000551301 LIFRP42702 1097 aa23.46■■□□□ 1.35
SLC48A1-208ENST00000551301 PGM5Q15124 567 aa23.46■■□□□ 1.35
SLC48A1-208ENST00000551301 VSIG10LQ86VR7 867 aa23.46■■□□□ 1.35
SLC48A1-208ENST00000551301 CCDC155Q8N6L0 562 aa23.46■■□□□ 1.35
SLC48A1-208ENST00000551301 HERVK_113Q902F9 699 aa23.46■■□□□ 1.35
SLC48A1-208ENST00000551301 KATNAL1Q9BW62 490 aa23.46■■□□□ 1.35
SLC48A1-208ENST00000551301 SLC12A7Q9Y666 1083 aa23.46■■□□□ 1.35
SLC48A1-208ENST00000551301 SCN10AQ9Y5Y9 1956 aa23.45■■□□□ 1.35
SLC48A1-208ENST00000551301 UMODL1Q5DID0 1318 aa23.45■■□□□ 1.34
SLC48A1-208ENST00000551301 SH2B2O14492 632 aaPredicted RBP23.45■■□□□ 1.34
SLC48A1-208ENST00000551301 TGFB3P10600 412 aa23.45■■□□□ 1.34
SLC48A1-208ENST00000551301 CYP2C9P11712 490 aa23.45■■□□□ 1.34
SLC48A1-208ENST00000551301 DNAJB2P25686 324 aa23.45■■□□□ 1.34
SLC48A1-208ENST00000551301 BFSP2Q13515 415 aa23.45■■□□□ 1.34
SLC48A1-208ENST00000551301 NECTIN1Q15223 517 aa23.45■■□□□ 1.34
SLC48A1-208ENST00000551301 GNPTABQ3T906 1256 aa23.45■■□□□ 1.34
SLC48A1-208ENST00000551301 PPTC7Q8NI37 304 aa23.45■■□□□ 1.34
SLC48A1-208ENST00000551301 CDX2Q99626 313 aaPredicted RBP23.45■■□□□ 1.34
SLC48A1-208ENST00000551301 MYL10Q9BUA6 226 aa23.45■■□□□ 1.34
SLC48A1-208ENST00000551301 CDC45O75419 566 aa23.44■■□□□ 1.34
SLC48A1-208ENST00000551301 STAM2O75886 525 aa23.44■■□□□ 1.34
SLC48A1-208ENST00000551301 SLC35G1Q2M3R5 365 aa23.44■■□□□ 1.34
SLC48A1-208ENST00000551301 SMARCC2Q8TAQ2 1214 aa23.44■■□□□ 1.34
SLC48A1-208ENST00000551301 TIFAQ96CG3 184 aa23.44■■□□□ 1.34
SLC48A1-208ENST00000551301 MSRAQ9UJ68 235 aa23.44■■□□□ 1.34
SLC48A1-208ENST00000551301 PITPNM1O00562 1244 aa23.43■■□□□ 1.34
SLC48A1-208ENST00000551301 ACTN1P12814 892 aa23.43■■□□□ 1.34
SLC48A1-208ENST00000551301 RFC2P35250 354 aa23.43■■□□□ 1.34
SLC48A1-208ENST00000551301 RAB30Q15771 203 aa23.43■■□□□ 1.34
SLC48A1-208ENST00000551301 PTGISQ16647 500 aa23.43■■□□□ 1.34
SLC48A1-208ENST00000551301 RASIP1Q5U651 963 aa23.43■■□□□ 1.34
SLC48A1-208ENST00000551301 OTOP2Q7RTS6 562 aa23.43■■□□□ 1.34
SLC48A1-208ENST00000551301 C7orf31Q8N865 590 aa23.43■■□□□ 1.34
SLC48A1-208ENST00000551301 CCDC136Q96JN2 1154 aa23.43■■□□□ 1.34
SLC48A1-208ENST00000551301 WNT8AQ9H1J5 351 aa23.43■■□□□ 1.34
SLC48A1-208ENST00000551301 PPFIA4O75335 1185 aa23.42■■□□□ 1.34
SLC48A1-208ENST00000551301 SCLYQ96I15 445 aa23.42■■□□□ 1.34
SLC48A1-208ENST00000551301 TTYH1Q9H313 450 aaPredicted RBP23.42■■□□□ 1.34
SLC48A1-208ENST00000551301 MLXIPQ9HAP2 919 aa23.42■■□□□ 1.34
SLC48A1-208ENST00000551301 SLC4A7Q9Y6M7 1214 aa23.42■■□□□ 1.34
SLC48A1-208ENST00000551301 ZBBXA8MT70 800 aa23.41■■□□□ 1.34
SLC48A1-208ENST00000551301 GGPS1O95749 300 aa23.41■■□□□ 1.34
SLC48A1-208ENST00000551301 KRT32Q14532 448 aa23.41■■□□□ 1.34
SLC48A1-208ENST00000551301 CELF3Q5SZQ8 465 aaKnown RBP23.41■■□□□ 1.34
SLC48A1-208ENST00000551301 SESTD1Q86VW0 696 aa23.41■■□□□ 1.34
SLC48A1-208ENST00000551301 SPATA33Q96N06 139 aa23.41■■□□□ 1.34
SLC48A1-208ENST00000551301 NEK1Q96PY6 1258 aa23.41■■□□□ 1.34
SLC48A1-208ENST00000551301 FOSL2P15408 326 aa23.4■■□□□ 1.34
SLC48A1-208ENST00000551301 MYSM1Q5VVJ2 828 aa23.4■■□□□ 1.34
SLC48A1-208ENST00000551301 XRRA1Q6P2D8 792 aa23.4■■□□□ 1.34
SLC48A1-208ENST00000551301 FANCBQ8NB91 859 aa23.4■■□□□ 1.34
SLC48A1-208ENST00000551301 IL31RAQ8NI17 732 aa23.4■■□□□ 1.34
SLC48A1-208ENST00000551301 CAGE1Q8TC20 777 aa23.4■■□□□ 1.34
SLC48A1-208ENST00000551301 ZNF576Q9H609 170 aa23.4■■□□□ 1.34
SLC48A1-208ENST00000551301 COL6A3P12111 3177 aa23.4■■□□□ 1.34
SLC48A1-208ENST00000551301 NOP56O00567 594 aaKnown RBP23.39■■□□□ 1.33
SLC48A1-208ENST00000551301 RGS20O76081 388 aa23.39■■□□□ 1.33
SLC48A1-208ENST00000551301 PSEN2P49810 448 aa23.39■■□□□ 1.33
SLC48A1-208ENST00000551301 MFSD10Q14728 455 aa23.39■■□□□ 1.33
SLC48A1-208ENST00000551301 DEFB128Q7Z7B8 93 aa23.39■■□□□ 1.33
SLC48A1-208ENST00000551301 ALG1Q9BT22 464 aa23.39■■□□□ 1.33
SLC48A1-208ENST00000551301 FTOQ9C0B1 505 aaKnown RBP eCLIP23.39■■□□□ 1.332e-6■■□□□ 11.5
SLC48A1-208ENST00000551301 MYH7BA7E2Y1 1941 aa23.38■■□□□ 1.33
SLC48A1-208ENST00000551301 PIK3CDO00329 1044 aa23.38■■□□□ 1.33
SLC48A1-208ENST00000551301 PLEKHA8P1O95397 391 aa23.38■■□□□ 1.33
SLC48A1-208ENST00000551301 HMGB1P09429 215 aaKnown RBP23.38■■□□□ 1.33
SLC48A1-208ENST00000551301 RXRAP19793 462 aa23.38■■□□□ 1.33
SLC48A1-208ENST00000551301 UBA1P22314 1058 aaKnown RBP23.38■■□□□ 1.33
SLC48A1-208ENST00000551301 FGD1P98174 961 aa23.38■■□□□ 1.33
SLC48A1-208ENST00000551301 NEDD9Q14511 834 aa23.38■■□□□ 1.33
SLC48A1-208ENST00000551301 KIAA0753Q2KHM9 967 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms