RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 NFXL1Q6ZNB6 911 aa12.09□□□□□ -0.47
CCDC38-207ENST00000549752 SH3RF1Q7Z6J0 888 aa12.09□□□□□ -0.47
CCDC38-207ENST00000549752 KRI1Q8N9T8 703 aaKnown RBP12.09□□□□□ -0.47
CCDC38-207ENST00000549752 IGDCC4Q8TDY8 1250 aa12.09□□□□□ -0.47
CCDC38-207ENST00000549752 LRCH3Q96II8 777 aa12.09□□□□□ -0.47
CCDC38-207ENST00000549752 LSG1Q9H089 658 aaKnown RBP12.09□□□□□ -0.47
CCDC38-207ENST00000549752 TRPC6Q9Y210 931 aa12.09□□□□□ -0.47
CCDC38-207ENST00000549752 GBF1Q92538 1859 aa12.08□□□□□ -0.48
CCDC38-207ENST00000549752 TANC1Q9C0D5 1861 aa12.08□□□□□ -0.48
CCDC38-207ENST00000549752 SOX1O00570 391 aaPredicted RBP12.08□□□□□ -0.48
CCDC38-207ENST00000549752 SLC27A2O14975 620 aa12.08□□□□□ -0.48
CCDC38-207ENST00000549752 PRC1O43663 620 aa12.08□□□□□ -0.48
CCDC38-207ENST00000549752 CDC45O75419 566 aa12.08□□□□□ -0.48
CCDC38-207ENST00000549752 EIF3JO75822 258 aaKnown RBP12.08□□□□□ -0.48
CCDC38-207ENST00000549752 SUPT20HL2P0C7V6 817 aa12.08□□□□□ -0.48
CCDC38-207ENST00000549752 HSD17B4P51659 736 aa12.08□□□□□ -0.48
CCDC38-207ENST00000549752 GHRHRQ02643 423 aa12.08□□□□□ -0.48
CCDC38-207ENST00000549752 PPIGQ13427 754 aaKnown RBP eCLIP12.08□□□□□ -0.48
CCDC38-207ENST00000549752 CREB3L3Q68CJ9 461 aa12.08□□□□□ -0.48
CCDC38-207ENST00000549752 MFSD5Q6N075 450 aa12.08□□□□□ -0.48
CCDC38-207ENST00000549752 SYNE3Q6ZMZ3 975 aa12.08□□□□□ -0.48
CCDC38-207ENST00000549752 STOX1Q6ZVD7 989 aa12.08□□□□□ -0.48
CCDC38-207ENST00000549752 CHST3Q7LGC8 479 aa12.08□□□□□ -0.48
CCDC38-207ENST00000549752 HOMER1Q86YM7 354 aa12.08□□□□□ -0.48
CCDC38-207ENST00000549752 FAM126BQ8IXS8 530 aa12.08□□□□□ -0.48
CCDC38-207ENST00000549752 ZNF654Q8IZM8 581 aa12.08□□□□□ -0.48
CCDC38-207ENST00000549752 TMEM199Q8N511 208 aa12.08□□□□□ -0.48
CCDC38-207ENST00000549752 SLC43A3Q8NBI5 491 aa12.08□□□□□ -0.48
CCDC38-207ENST00000549752 MTG1Q9BT17 334 aaPredicted RBP12.08□□□□□ -0.48
CCDC38-207ENST00000549752 SPZ1Q9BXG8 430 aa12.08□□□□□ -0.48
CCDC38-207ENST00000549752 SEC63Q9UGP8 760 aaKnown RBP12.08□□□□□ -0.48
CCDC38-207ENST00000549752 TBX21Q9UL17 535 aa12.08□□□□□ -0.48
CCDC38-207ENST00000549752 GCOM1H8Y6P7 765 aaPredicted RBP12.07□□□□□ -0.48
CCDC38-207ENST00000549752 POLR2MP0CAP2 368 aa12.07□□□□□ -0.48
CCDC38-207ENST00000549752 LIFRP42702 1097 aa12.07□□□□□ -0.48
CCDC38-207ENST00000549752 IRX5P78411 483 aaPredicted RBP12.07□□□□□ -0.48
CCDC38-207ENST00000549752 KRT32Q14532 448 aa12.07□□□□□ -0.48
CCDC38-207ENST00000549752 NECTIN1Q15223 517 aa12.07□□□□□ -0.48
CCDC38-207ENST00000549752 FAM109BQ6ICB4 259 aaPredicted RBP12.07□□□□□ -0.48
CCDC38-207ENST00000549752 RRP36Q96EU6 259 aaKnown RBP12.07□□□□□ -0.48
CCDC38-207ENST00000549752 TAAR1Q96RJ0 339 aa12.07□□□□□ -0.48
CCDC38-207ENST00000549752 PIGSQ96S52 555 aa12.07□□□□□ -0.48
CCDC38-207ENST00000549752 LY9Q9HBG7 655 aa12.07□□□□□ -0.48
CCDC38-207ENST00000549752 PXMP2Q9NR77 195 aa12.07□□□□□ -0.48
CCDC38-207ENST00000549752 DDX49Q9Y6V7 483 aaKnown RBP12.07□□□□□ -0.48
CCDC38-207ENST00000549752 SCN5AQ14524 2016 aa12.06□□□□□ -0.48
CCDC38-207ENST00000549752 A6NJR5 290 aa12.06□□□□□ -0.48
CCDC38-207ENST00000549752 GH1P01241 217 aa12.06□□□□□ -0.48
CCDC38-207ENST00000549752 CD4P01730 458 aa12.06□□□□□ -0.48
CCDC38-207ENST00000549752 NR3C2P08235 984 aa12.06□□□□□ -0.48
CCDC38-207ENST00000549752 MYL3P08590 195 aa12.06□□□□□ -0.48
CCDC38-207ENST00000549752 EIF2AK2P19525 551 aaKnown RBP12.06□□□□□ -0.48
CCDC38-207ENST00000549752 ANTXR2P58335 489 aa12.06□□□□□ -0.48
CCDC38-207ENST00000549752 PURAQ00577 322 aaKnown RBP12.06□□□□□ -0.48
CCDC38-207ENST00000549752 PTPN11Q06124 597 aaPredicted RBP12.06□□□□□ -0.48
CCDC38-207ENST00000549752 SHHQ15465 462 aa12.06□□□□□ -0.48
CCDC38-207ENST00000549752 SEPT14Q6ZU15 432 aa12.06□□□□□ -0.48
CCDC38-207ENST00000549752 DEFB123Q8N688 67 aa12.06□□□□□ -0.48
CCDC38-207ENST00000549752 TBC1D5Q92609 795 aa12.06□□□□□ -0.48
CCDC38-207ENST00000549752 CUL5Q93034 780 aa12.06□□□□□ -0.48
CCDC38-207ENST00000549752 RNPC3Q96LT9 517 aaKnown RBP12.06□□□□□ -0.48
CCDC38-207ENST00000549752 MTIF3Q9H2K0 278 aaKnown RBP12.06□□□□□ -0.48
CCDC38-207ENST00000549752 BMP2KQ9NSY1 1161 aaPredicted RBP12.06□□□□□ -0.48
CCDC38-207ENST00000549752 SLC12A7Q9Y666 1083 aa12.06□□□□□ -0.48
CCDC38-207ENST00000549752 TAF6LQ9Y6J9 622 aa12.06□□□□□ -0.48
CCDC38-207ENST00000549752 SH2B2O14492 632 aaPredicted RBP12.05□□□□□ -0.48
CCDC38-207ENST00000549752 STAM2O75886 525 aa12.05□□□□□ -0.48
CCDC38-207ENST00000549752 HMGB1P09429 215 aaKnown RBP12.05□□□□□ -0.48
CCDC38-207ENST00000549752 TGFB3P10600 412 aa12.05□□□□□ -0.48
CCDC38-207ENST00000549752 CCND2P30279 289 aa12.05□□□□□ -0.48
CCDC38-207ENST00000549752 SMAD3P84022 425 aaKnown RBP12.05□□□□□ -0.48
CCDC38-207ENST00000549752 ZNF697Q5TEC3 545 aa12.05□□□□□ -0.48
CCDC38-207ENST00000549752 NFRKBQ6P4R8 1299 aa12.05□□□□□ -0.48
CCDC38-207ENST00000549752 CCDC62Q6P9F0 684 aa12.05□□□□□ -0.48
CCDC38-207ENST00000549752 PSRC1Q6PGN9 363 aaPredicted RBP12.05□□□□□ -0.48
CCDC38-207ENST00000549752 NEK1Q96PY6 1258 aa12.05□□□□□ -0.48
CCDC38-207ENST00000549752 KATNAL1Q9BW62 490 aa12.05□□□□□ -0.48
CCDC38-207ENST00000549752 HIPK3Q9H422 1215 aa12.05□□□□□ -0.48
CCDC38-207ENST00000549752 COL20A1Q9P218 1284 aa12.05□□□□□ -0.48
CCDC38-207ENST00000549752 MRVI1Q9Y6F6 885 aa12.05□□□□□ -0.48
CCDC38-207ENST00000549752 CYTH3O43739 400 aa12.04□□□□□ -0.48
CCDC38-207ENST00000549752 PPP1R11O60927 126 aaPredicted RBP12.04□□□□□ -0.48
CCDC38-207ENST00000549752 MYCLP12524 364 aaPredicted RBP12.04□□□□□ -0.48
CCDC38-207ENST00000549752 CASTP20810 708 aaKnown RBP12.04□□□□□ -0.48
CCDC38-207ENST00000549752 ITGB8P26012 769 aa12.04□□□□□ -0.48
CCDC38-207ENST00000549752 LAMC2Q13753 1193 aa12.04□□□□□ -0.48
CCDC38-207ENST00000549752 DGKDQ16760 1214 aa12.04□□□□□ -0.48
CCDC38-207ENST00000549752 TSGA10IPQ3SY00 556 aa12.04□□□□□ -0.48
CCDC38-207ENST00000549752 GNPTABQ3T906 1256 aa12.04□□□□□ -0.48
CCDC38-207ENST00000549752 SGMS1Q86VZ5 419 aa12.04□□□□□ -0.48
CCDC38-207ENST00000549752 TEX2Q8IWB9 1127 aa12.04□□□□□ -0.48
CCDC38-207ENST00000549752 RPUSD2Q8IZ73 545 aaKnown RBP12.04□□□□□ -0.48
CCDC38-207ENST00000549752 EMID1Q96A84 441 aaPredicted RBP12.04□□□□□ -0.48
CCDC38-207ENST00000549752 PDCD2LQ9BRP1 358 aa12.04□□□□□ -0.48
CCDC38-207ENST00000549752 PPP1R12CQ9BZL4 782 aa12.04□□□□□ -0.48
CCDC38-207ENST00000549752 ALDH8A1Q9H2A2 487 aaPredicted RBP12.04□□□□□ -0.48
CCDC38-207ENST00000549752 SENP2Q9HC62 589 aa12.04□□□□□ -0.48
CCDC38-207ENST00000549752 MYH9P35579 1960 aaKnown RBP12.03□□□□□ -0.48
CCDC38-207ENST00000549752 COL6A3P12111 3177 aa12.03□□□□□ -0.48
CCDC38-207ENST00000549752 TMEM265A0A087WTH1 108 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms