RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 RPC82P32349 654 aa2.49□□□□□ -2.01
snR43snR43 RPN12P32496 274 aa2.49□□□□□ -2.01
snR43snR43 STE14P32584 239 aa2.49□□□□□ -2.01
snR43snR43 ORC2P32833 620 aa2.49□□□□□ -2.01
snR43snR43 PRP18P33411 251 aaPredicted RBP2.49□□□□□ -2.01
snR43snR43 YBL055CP34220 418 aaPredicted RBP2.49□□□□□ -2.01
snR43snR43 MIA40P36046 403 aa2.49□□□□□ -2.01
snR43snR43 STB6P36085 766 aa2.49□□□□□ -2.01
snR43snR43 RPF2P36160 344 aaKnown RBP2.49□□□□□ -2.01
snR43snR43 YSW1P38280 609 aa2.49□□□□□ -2.01
snR43snR43 RRT2P38332 387 aa2.49□□□□□ -2.01
snR43snR43 HIS2P38635 335 aa2.49□□□□□ -2.01
snR43snR43 UBA4P38820 440 aa2.49□□□□□ -2.01
snR43snR43 YHR182WP38870 785 aa2.49□□□□□ -2.01
snR43snR43 YHR210CP38893 341 aa2.49□□□□□ -2.01
snR43snR43 SPC72P39723 622 aa2.49□□□□□ -2.01
snR43snR43 SAW1P39735 261 aa2.49□□□□□ -2.01
snR43snR43 GIM4P40005 111 aaKnown RBP2.49□□□□□ -2.01
snR43snR43 ALY2P47029 1046 aa2.49□□□□□ -2.01
snR43snR43 SGF73P53165 657 aa2.49□□□□□ -2.01
snR43snR43 DAM1P53267 343 aa2.49□□□□□ -2.01
snR43snR43 ESF2P53743 316 aaKnown RBP2.49□□□□□ -2.01
snR43snR43 TRM12Q04235 462 aa2.49□□□□□ -2.01
snR43snR43 YDR338CQ05497 695 aa2.49□□□□□ -2.01
snR43snR43 YDR278CQ05612 105 aa2.49□□□□□ -2.01
snR43snR43 MDM30Q05930 598 aa2.49□□□□□ -2.01
snR43snR43 RAX1Q08760 435 aa2.49□□□□□ -2.01
snR43snR43 HUA2Q12134 243 aa2.49□□□□□ -2.01
snR43snR43 YDR018CQ12185 396 aa2.49□□□□□ -2.01
snR43snR43 RPL7BQ12213 244 aaKnown RBP2.49□□□□□ -2.01
snR43snR43 TRM13Q12383 476 aa2.49□□□□□ -2.01
snR43snR43 AVL9Q12500 764 aa2.49□□□□□ -2.01
snR43snR43 RMD5Q12508 421 aa2.49□□□□□ -2.01
snR43snR43 MDN1Q12019 4910 aaKnown RBP2.48□□□□□ -2.01
snR43snR43 DIF1O13577 133 aa2.48□□□□□ -2.01
snR43snR43 SSA3P09435 649 aaKnown RBP2.48□□□□□ -2.01
snR43snR43 ERG11P10614 530 aa2.48□□□□□ -2.01
snR43snR43 CDC26P14724 124 aa2.48□□□□□ -2.01
snR43snR43 TSR4P25040 408 aa2.48□□□□□ -2.01
snR43snR43 YCL042WP25572 119 aa2.48□□□□□ -2.01
snR43snR43 CPR3P25719 182 aa2.48□□□□□ -2.01
snR43snR43 NIP1P32497 812 aaKnown RBP2.48□□□□□ -2.01
snR43snR43 SFC1P33303 322 aa2.48□□□□□ -2.01
snR43snR43 YPT52P36018 234 aaKnown RBP2.48□□□□□ -2.01
snR43snR43 MOH1P38191 138 aa2.48□□□□□ -2.01
snR43snR43 MMS21P38632 267 aa2.48□□□□□ -2.01
snR43snR43 SET5P38890 526 aaKnown RBP2.48□□□□□ -2.01
snR43snR43 BEM4P39011 633 aa2.48□□□□□ -2.01
snR43snR43 SEO1P39709 593 aa2.48□□□□□ -2.01
snR43snR43 LSM5P40089 93 aaKnown RBP2.48□□□□□ -2.01
snR43snR43 ALG8P40351 577 aa2.48□□□□□ -2.01
snR43snR43 SDP1P40479 209 aa2.48□□□□□ -2.01
snR43snR43 VHR1P40522 640 aa2.48□□□□□ -2.01
snR43snR43 URM1P40554 99 aaPredicted RBP2.48□□□□□ -2.01
snR43snR43 SSY5P47002 699 aa2.48□□□□□ -2.01
snR43snR43 YJR030CP47101 745 aa2.48□□□□□ -2.01
snR43snR43 JSN1P47135 1091 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
snR43snR43 UBC9P50623 157 aaPredicted RBP2.48□□□□□ -2.01
snR43snR43 FHN1P53279 174 aa2.48□□□□□ -2.01
snR43snR43 NOP15P53927 220 aaPredicted RBP2.48□□□□□ -2.01
snR43snR43 MRS2Q01926 470 aa2.48□□□□□ -2.01
snR43snR43 MTQ2Q03920 221 aaPredicted RBP2.48□□□□□ -2.01
snR43snR43 TEN1Q07921 160 aa2.48□□□□□ -2.01
snR43snR43 DAS2Q12084 232 aa2.48□□□□□ -2.01
snR43snR43 DYN1P36022 4092 aa2.47□□□□□ -2.01
snR43snR43 LAT1P12695 482 aaKnown RBP2.47□□□□□ -2.01
snR43snR43 ATG15P25641 520 aa2.47□□□□□ -2.01
snR43snR43 NDI1P32340 513 aa2.47□□□□□ -2.01
snR43snR43 HXT1P32465 570 aa2.47□□□□□ -2.01
snR43snR43 SMI1P32566 505 aa2.47□□□□□ -2.01
snR43snR43 PET127P32606 800 aa2.47□□□□□ -2.01
snR43snR43 MGM101P32787 269 aaKnown RBP2.47□□□□□ -2.01
snR43snR43 UGP1P32861 499 aaKnown RBP2.47□□□□□ -2.01
snR43snR43 PEX6P33760 1030 aa2.47□□□□□ -2.01
snR43snR43 TIP20P33891 701 aa2.47□□□□□ -2.01
snR43snR43 SKT5P34226 696 aa2.47□□□□□ -2.01
snR43snR43 VPS24P36095 224 aaKnown RBP2.47□□□□□ -2.01
snR43snR43 YHR045WP38775 560 aa2.47□□□□□ -2.01
snR43snR43 GPI16P38875 610 aa2.47□□□□□ -2.01
snR43snR43 CTF8P38877 133 aa2.47□□□□□ -2.01
snR43snR43 CKB2P38930 258 aa2.47□□□□□ -2.01
snR43snR43 MNN1P39106 762 aa2.47□□□□□ -2.01
snR43snR43 YMR124WP39523 943 aaKnown RBP2.47□□□□□ -2.01
snR43snR43 DPH1P40487 425 aaKnown RBP2.47□□□□□ -2.01
snR43snR43 RLP7P40693 322 aaKnown RBP2.47□□□□□ -2.01
snR43snR43 ERR3P42222 437 aa2.47□□□□□ -2.01
snR43snR43 OSW7P43611 510 aa2.47□□□□□ -2.01
snR43snR43 JHD2P47156 728 aaPredicted RBP2.47□□□□□ -2.01
snR43snR43 BRO1P48582 844 aa2.47□□□□□ -2.01
snR43snR43 PAN2P53010 1115 aaPredicted RBP2.47□□□□□ -2.01
snR43snR43 LCL3P53153 274 aa2.47□□□□□ -2.01
snR43snR43 PEX8P53248 589 aa2.47□□□□□ -2.01
snR43snR43 YGR250CP53316 781 aaKnown RBP2.47□□□□□ -2.01
snR43snR43 JJJ1P53863 590 aa2.47□□□□□ -2.01
snR43snR43 ERG5P54781 538 aa2.47□□□□□ -2.01
snR43snR43 PRO2P54885 456 aaKnown RBP2.47□□□□□ -2.01
snR43snR43 SED5Q01590 340 aa2.47□□□□□ -2.01
snR43snR43 TFB2Q02939 513 aa2.47□□□□□ -2.01
snR43snR43 ATP25Q03153 612 aa2.47□□□□□ -2.01
snR43snR43 VTA1Q06263 330 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms