RNA–Protein interactions for RNA: YPR175W

DPB2, Transcript of Second largest subunit of DNA polymerase II (DNA polymerase epsilon), yeast

Gene DPB2, Length 2,070 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DPB2	YPR175W	MCH4	Q08268	501 aa		5.79	□□□□□ -1.48
DPB2	YPR175W	APL5	Q08951	932 aa	Known RBP	5.79	□□□□□ -1.48
DPB2	YPR175W	AEP3	Q12089	606 aa		5.79	□□□□□ -1.48
DPB2	YPR175W	YLR049C	Q12110	428 aa		5.79	□□□□□ -1.48
DPB2	YPR175W	SWR1	Q05471	1514 aa		5.79	□□□□□ -1.48
DPB2	YPR175W	FAA1	P30624	700 aa	Known RBP	5.79	□□□□□ -1.48
DPB2	YPR175W	ARA1	P38115	344 aa		5.79	□□□□□ -1.48
DPB2	YPR175W	MOH1	P38191	138 aa		5.79	□□□□□ -1.48
DPB2	YPR175W	LEU5	P38702	357 aa		5.79	□□□□□ -1.48
DPB2	YPR175W	CCT2	P39076	527 aa	Known RBP	5.79	□□□□□ -1.48
DPB2	YPR175W	RAV1	P47104	1357 aa		5.78	□□□□□ -1.48
DPB2	YPR175W	SUC2	P00724	532 aa		5.78	□□□□□ -1.48
DPB2	YPR175W	GAL4	P04386	881 aa		5.78	□□□□□ -1.48
DPB2	YPR175W	PPZ1	P26570	692 aa		5.78	□□□□□ -1.48
DPB2	YPR175W	ATP11	P32453	318 aa		5.78	□□□□□ -1.48
DPB2	YPR175W	SHP1	P34223	423 aa		5.78	□□□□□ -1.48
DPB2	YPR175W	ARN1	P38731	627 aa		5.78	□□□□□ -1.48
DPB2	YPR175W	OCA1	P50946	238 aa	Predicted RBP	5.78	□□□□□ -1.48
DPB2	YPR175W	CUE3	P53137	624 aa	Known RBP	5.78	□□□□□ -1.48
DPB2	YPR175W	SNU56	Q03782	492 aa	Known RBP	5.78	□□□□□ -1.48
DPB2	YPR175W	PDR8	Q06149	701 aa		5.78	□□□□□ -1.48
DPB2	YPR175W	SPH1	Q06160	661 aa		5.78	□□□□□ -1.48
DPB2	YPR175W	PFA4	Q12006	378 aa		5.78	□□□□□ -1.48
DPB2	YPR175W	CAR1	P00812	333 aa	Known RBP	5.78	□□□□□ -1.48
DPB2	YPR175W	KRE2	P27809	442 aa		5.78	□□□□□ -1.48
DPB2	YPR175W	MRPL4	P36517	319 aa		5.78	□□□□□ -1.48
DPB2	YPR175W	YEL020C	P39994	560 aa		5.78	□□□□□ -1.48
DPB2	YPR175W	SNG1	P46950	547 aa		5.78	□□□□□ -1.48
DPB2	YPR175W	YNL143C	P53908	130 aa		5.78	□□□□□ -1.48
DPB2	YPR175W	YNL058C	P53947	316 aa		5.78	□□□□□ -1.48
DPB2	YPR175W	UTP6	Q02354	440 aa	Known RBP	5.78	□□□□□ -1.48
DPB2	YPR175W	CDC45	Q08032	650 aa		5.78	□□□□□ -1.48
DPB2	YPR175W	DBP3	P20447	523 aa	Known RBP	5.77	□□□□□ -1.49
DPB2	YPR175W	BEM1	P29366	551 aa		5.77	□□□□□ -1.49
DPB2	YPR175W	PRP21	P32524	280 aa	Predicted RBP	5.77	□□□□□ -1.49
DPB2	YPR175W	PPQ1	P32945	549 aa		5.77	□□□□□ -1.49
DPB2	YPR175W	ALK1	P43633	760 aa	Known RBP	5.77	□□□□□ -1.49
DPB2	YPR175W	ORC5	P50874	479 aa		5.77	□□□□□ -1.49
DPB2	YPR175W	ERV25	P54837	211 aa	Known RBP	5.77	□□□□□ -1.49
DPB2	YPR175W	MTR10	Q99189	972 aa		5.77	□□□□□ -1.49
DPB2	YPR175W	DUG2	P38149	878 aa		5.76	□□□□□ -1.49
DPB2	YPR175W	YTA12	P40341	825 aa		5.76	□□□□□ -1.49
DPB2	YPR175W	ELP2	P42935	788 aa		5.76	□□□□□ -1.49
DPB2	YPR175W	MRK1	P50873	501 aa		5.76	□□□□□ -1.49
DPB2	YPR175W	ZPR1	P53303	486 aa	Known RBP	5.76	□□□□□ -1.49
DPB2	YPR175W	NDL1	Q06568	189 aa		5.76	□□□□□ -1.49
DPB2	YPR175W	POS5	Q06892	414 aa		5.76	□□□□□ -1.49
DPB2	YPR175W	YPR089W	O13585	888 aa		5.76	□□□□□ -1.49
DPB2	YPR175W	GPH1	P06738	902 aa	Known RBP	5.76	□□□□□ -1.49
DPB2	YPR175W	UBA1	P22515	1024 aa	Known RBP	5.76	□□□□□ -1.49
DPB2	YPR175W	WSS1	P38838	269 aa		5.76	□□□□□ -1.49
DPB2	YPR175W	PAC2	P39937	518 aa		5.76	□□□□□ -1.49
DPB2	YPR175W	RPS0B	P46654	252 aa	Known RBP	5.76	□□□□□ -1.49
DPB2	YPR175W	YJR154W	P47181	346 aa		5.76	□□□□□ -1.49
DPB2	YPR175W	ABZ2	Q03266	374 aa		5.76	□□□□□ -1.49
DPB2	YPR175W	RPN9	Q04062	393 aa	Known RBP	5.76	□□□□□ -1.49
DPB2	YPR175W	TFB5	Q3E7C1	72 aa	Predicted RBP	5.76	□□□□□ -1.49
DPB2	YPR175W	KOG1	P38873	1557 aa		5.76	□□□□□ -1.49
DPB2	YPR175W	RHO2	P06781	192 aa		5.75	□□□□□ -1.49
DPB2	YPR175W	DMC1	P25453	334 aa		5.75	□□□□□ -1.49
DPB2	YPR175W	NIP1	P32497	812 aa	Known RBP	5.75	□□□□□ -1.49
DPB2	YPR175W	BNA4	P38169	460 aa		5.75	□□□□□ -1.49
DPB2	YPR175W	TFG2	P41896	400 aa	Predicted RBP	5.75	□□□□□ -1.49
DPB2	YPR175W	FRE7	Q12333	620 aa		5.75	□□□□□ -1.49
DPB2	YPR175W	SUI2	P20459	304 aa	Known RBP	5.75	□□□□□ -1.49
DPB2	YPR175W	RHB1	P25378	209 aa		5.75	□□□□□ -1.49
DPB2	YPR175W	MCM4	P30665	933 aa	Known RBP	5.75	□□□□□ -1.49
DPB2	YPR175W	GPI16	P38875	610 aa		5.75	□□□□□ -1.49
DPB2	YPR175W	VTC3	Q02725	835 aa		5.75	□□□□□ -1.49
DPB2	YPR175W	HER1	Q12276	1246 aa		5.75	□□□□□ -1.49
DPB2	YPR175W	NDJ1	Q12366	352 aa		5.75	□□□□□ -1.49
DPB2	YPR175W	RKM5	Q12367	367 aa		5.75	□□□□□ -1.49
DPB2	YPR175W	RPL6B	P05739	176 aa	Known RBP	5.74	□□□□□ -1.49
DPB2	YPR175W	VHC1	P38329	1120 aa		5.74	□□□□□ -1.49
DPB2	YPR175W	RPL6A	Q02326	176 aa	Known RBP	5.74	□□□□□ -1.49
DPB2	YPR175W	ADA2	Q02336	434 aa		5.74	□□□□□ -1.49
DPB2	YPR175W	BSP1	Q06604	576 aa		5.74	□□□□□ -1.49
DPB2	YPR175W	MES1	P00958	751 aa	Known RBP	5.73	□□□□□ -1.49
DPB2	YPR175W	BI2	P03873	423 aa		5.73	□□□□□ -1.49
DPB2	YPR175W	SCH9	P11792	824 aa	Known RBP	5.73	□□□□□ -1.49
DPB2	YPR175W	YVH1	Q02256	364 aa	Known RBP	5.73	□□□□□ -1.49
DPB2	YPR175W	YPL014W	Q02606	381 aa		5.73	□□□□□ -1.49
DPB2	YPR175W	RLP24	Q07915	199 aa	Known RBP	5.73	□□□□□ -1.49
DPB2	YPR175W	RTC5	Q12108	567 aa	Known RBP	5.73	□□□□□ -1.49
DPB2	YPR175W	MDY2	Q12285	212 aa		5.73	□□□□□ -1.49
DPB2	YPR175W	YLR278C	Q05854	1341 aa		5.73	□□□□□ -1.49
DPB2	YPR175W	ADE4	P04046	510 aa	Known RBP	5.73	□□□□□ -1.49
DPB2	YPR175W	RPC40	P07703	335 aa	Known RBP	5.73	□□□□□ -1.49
DPB2	YPR175W	ALG1	P16661	449 aa		5.73	□□□□□ -1.49
DPB2	YPR175W	MSS51	P32335	436 aa		5.73	□□□□□ -1.49
DPB2	YPR175W	PHO90	P39535	881 aa		5.73	□□□□□ -1.49
DPB2	YPR175W	EPL1	P43572	832 aa		5.73	□□□□□ -1.49
DPB2	YPR175W	YIP5	P53108	310 aa		5.73	□□□□□ -1.49
DPB2	YPR175W	SMM1	P53720	384 aa	Known RBP	5.73	□□□□□ -1.49
DPB2	YPR175W	TIM44	Q01852	431 aa		5.73	□□□□□ -1.49
DPB2	YPR175W	NUP100	Q02629	959 aa		5.73	□□□□□ -1.49
DPB2	YPR175W	GRX3	Q03835	250 aa		5.73	□□□□□ -1.49
DPB2	YPR175W	MGR3	Q04472	501 aa		5.73	□□□□□ -1.49
DPB2	YPR175W	SNT309	Q06091	175 aa	Predicted RBP	5.73	□□□□□ -1.49
DPB2	YPR175W	SCEI	P03882	235 aa		5.72	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms