RNA–Protein interactions for RNA: YPL017C

IRC15, Transcript of Microtubule associated protein, yeast

Gene IRC15, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC15	YPL017C	YCL012C	Q8J0M4	134 aa		11.74	□□□□□ -0.53
IRC15	YPL017C	SGV1	P23293	657 aa	Known RBP	11.73	□□□□□ -0.53
IRC15	YPL017C	CLB3	P24870	427 aa		11.73	□□□□□ -0.53
IRC15	YPL017C	MRPL32	P25348	183 aa		11.73	□□□□□ -0.53
IRC15	YPL017C	RAD51	P25454	400 aa		11.73	□□□□□ -0.53
IRC15	YPL017C	NPL6	P32832	435 aa		11.73	□□□□□ -0.53
IRC15	YPL017C	SOL2	P37262	315 aa		11.73	□□□□□ -0.53
IRC15	YPL017C	PXR1	P53335	271 aa	Predicted RBP	11.73	□□□□□ -0.53
IRC15	YPL017C	YLL007C	Q07799	665 aa		11.73	□□□□□ -0.53
IRC15	YPL017C	TGL5	Q12043	749 aa		11.73	□□□□□ -0.53
IRC15	YPL017C	WTM1	Q12363	437 aa	Known RBP	11.73	□□□□□ -0.53
IRC15	YPL017C	PRI2	P20457	528 aa		11.72	□□□□□ -0.53
IRC15	YPL017C	RSC6	P25632	483 aa		11.72	□□□□□ -0.53
IRC15	YPL017C	URK1	P27515	501 aa		11.72	□□□□□ -0.53
IRC15	YPL017C	SSZ1	P38788	538 aa	Known RBP	11.72	□□□□□ -0.53
IRC15	YPL017C	NNF1	P47149	201 aa		11.72	□□□□□ -0.53
IRC15	YPL017C	RSN1	Q03516	953 aa		11.72	□□□□□ -0.53
IRC15	YPL017C	SPO71	Q03868	1245 aa		11.72	□□□□□ -0.53
IRC15	YPL017C	MFG1	Q07684	458 aa		11.72	□□□□□ -0.53
IRC15	YPL017C	PUS7	Q08647	676 aa	Known RBP	11.72	□□□□□ -0.53
IRC15	YPL017C	MCD1	Q12158	566 aa		11.72	□□□□□ -0.53
IRC15	YPL017C	MSH5	Q12175	901 aa		11.72	□□□□□ -0.53
IRC15	YPL017C	STE3	P06783	470 aa		11.71	□□□□□ -0.53
IRC15	YPL017C	HMG2	P12684	1045 aa		11.71	□□□□□ -0.53
IRC15	YPL017C	REV1	P12689	985 aa		11.71	□□□□□ -0.53
IRC15	YPL017C	RSR1	P13856	272 aa		11.71	□□□□□ -0.53
IRC15	YPL017C	IDI1	P15496	288 aa		11.71	□□□□□ -0.53
IRC15	YPL017C	MET8	P15807	274 aa		11.71	□□□□□ -0.53
IRC15	YPL017C	ATP11	P32453	318 aa		11.71	□□□□□ -0.53
IRC15	YPL017C	SEC66	P33754	206 aa		11.71	□□□□□ -0.53
IRC15	YPL017C	MAE1	P36013	669 aa	Known RBP	11.71	□□□□□ -0.53
IRC15	YPL017C	YCR087C-A	P37263	153 aa		11.71	□□□□□ -0.53
IRC15	YPL017C	RIB1	P38066	345 aa		11.71	□□□□□ -0.53
IRC15	YPL017C	DBP8	P38719	431 aa		11.71	□□□□□ -0.53
IRC15	YPL017C	LRP1	P38801	184 aa	Known RBP	11.71	□□□□□ -0.53
IRC15	YPL017C	DLD3	P39976	496 aa	Known RBP	11.71	□□□□□ -0.53
IRC15	YPL017C	SHE4	P51534	789 aa		11.71	□□□□□ -0.53
IRC15	YPL017C	PML39	Q03760	334 aa		11.71	□□□□□ -0.53
IRC15	YPL017C	FMP42	Q04991	504 aa		11.71	□□□□□ -0.53
IRC15	YPL017C	MCM21	Q06675	368 aa		11.71	□□□□□ -0.53
IRC15	YPL017C	TY4B-P	A0A0B7P3V8	1104 aa		11.7	□□□□□ -0.54
IRC15	YPL017C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	11.7	□□□□□ -0.54	not detected
IRC15	YPL017C	SEC17	P32602	292 aa		11.7	□□□□□ -0.54
IRC15	YPL017C	MAC1	P35192	417 aa		11.7	□□□□□ -0.54
IRC15	YPL017C	ATG7	P38862	630 aa		11.7	□□□□□ -0.54
IRC15	YPL017C	RSP5	P39940	809 aa	Known RBP	11.7	□□□□□ -0.54
IRC15	YPL017C	ASI1	P54074	624 aa		11.7	□□□□□ -0.54
IRC15	YPL017C	AAT1	Q01802	451 aa		11.7	□□□□□ -0.54
IRC15	YPL017C	IRC15	Q02733	499 aa		11.7	□□□□□ -0.54
IRC15	YPL017C	SWA2	Q06677	668 aa		11.7	□□□□□ -0.54
IRC15	YPL017C	RPN5	Q12250	445 aa	Known RBP	11.7	□□□□□ -0.54
IRC15	YPL017C	TPK3	P05986	398 aa		11.7	□□□□□ -0.54
IRC15	YPL017C	UTP11	P34247	250 aa	Predicted RBP	11.7	□□□□□ -0.54
IRC15	YPL017C	ECM8	P38246	354 aa		11.7	□□□□□ -0.54
IRC15	YPL017C	COS111	P38308	924 aa		11.7	□□□□□ -0.54
IRC15	YPL017C	EGD2	P38879	174 aa	Known RBP	11.7	□□□□□ -0.54
IRC15	YPL017C	ATP22	P50273	684 aa	Predicted RBP	11.7	□□□□□ -0.54
IRC15	YPL017C	YGR054W	P53235	642 aa	Known RBP	11.7	□□□□□ -0.54
IRC15	YPL017C	VPS13	Q07878	3144 aa		11.69	□□□□□ -0.54
IRC15	YPL017C	ATP4	P05626	244 aa		11.69	□□□□□ -0.54
IRC15	YPL017C	LEU4	P06208	619 aa	Known RBP	11.69	□□□□□ -0.54
IRC15	YPL017C	UNG1	P12887	359 aa		11.69	□□□□□ -0.54
IRC15	YPL017C	SIR1	P21691	654 aa		11.69	□□□□□ -0.54
IRC15	YPL017C	CLB2	P24869	491 aa		11.69	□□□□□ -0.54
IRC15	YPL017C	PUP2	P32379	260 aa		11.69	□□□□□ -0.54
IRC15	YPL017C	HBS1	P32769	611 aa	Known RBP	11.69	□□□□□ -0.54
IRC15	YPL017C	YPT52	P36018	234 aa	Known RBP	11.69	□□□□□ -0.54
IRC15	YPL017C	AIM22	P47051	409 aa		11.69	□□□□□ -0.54
IRC15	YPL017C	YNL260C	P53846	198 aa		11.69	□□□□□ -0.54
IRC15	YPL017C	BNI4	P53858	892 aa		11.69	□□□□□ -0.54
IRC15	YPL017C	SFB2	P53953	876 aa		11.69	□□□□□ -0.54
IRC15	YPL017C	YMR178W	Q03219	274 aa	Known RBP	11.69	□□□□□ -0.54
IRC15	YPL017C	THP1	Q08231	455 aa		11.69	□□□□□ -0.54
IRC15	YPL017C	GYP1	Q08484	637 aa		11.69	□□□□□ -0.54
IRC15	YPL017C	RPN8	Q08723	338 aa	Known RBP	11.69	□□□□□ -0.54
IRC15	YPL017C	YDR056C	Q12025	205 aa		11.69	□□□□□ -0.54
IRC15	YPL017C	YPR011C	Q12251	326 aa		11.69	□□□□□ -0.54
IRC15	YPL017C	RRP42	Q12277	265 aa	Predicted RBP	11.69	□□□□□ -0.54
IRC15	YPL017C	MDM12	Q92328	271 aa		11.69	□□□□□ -0.54
IRC15	YPL017C	SRN2	Q99176	213 aa		11.69	□□□□□ -0.54
IRC15	YPL017C	FUM1	P08417	488 aa	Known RBP	11.68	□□□□□ -0.54
IRC15	YPL017C	PPZ1	P26570	692 aa		11.68	□□□□□ -0.54
IRC15	YPL017C	EMC3	P36039	253 aa		11.68	□□□□□ -0.54
IRC15	YPL017C	ERG10	P41338	398 aa	Known RBP	11.68	□□□□□ -0.54
IRC15	YPL017C	SWC4	P53201	476 aa		11.68	□□□□□ -0.54
IRC15	YPL017C	YGR015C	P53208	328 aa		11.68	□□□□□ -0.54
IRC15	YPL017C	SWP1	Q02795	286 aa		11.68	□□□□□ -0.54
IRC15	YPL017C	TLG1	Q03322	224 aa		11.68	□□□□□ -0.54
IRC15	YPL017C	SSQ1	Q05931	657 aa	Predicted RBP	11.68	□□□□□ -0.54
IRC15	YPL017C	ARR1	Q06596	294 aa		11.68	□□□□□ -0.54
IRC15	YPL017C	YLL054C	Q12244	843 aa		11.68	□□□□□ -0.54
IRC15	YPL017C	Q0010	Q9ZZX9	128 aa		11.68	□□□□□ -0.54
IRC15	YPL017C	PRT1	P06103	763 aa	Known RBP	11.67	□□□□□ -0.54
IRC15	YPL017C	EPT1	P22140	391 aa		11.67	□□□□□ -0.54
IRC15	YPL017C	ITR2	P30606	609 aa		11.67	□□□□□ -0.54
IRC15	YPL017C	NTR2	P36118	322 aa	Predicted RBP	11.67	□□□□□ -0.54
IRC15	YPL017C	GLG1	P36143	616 aa		11.67	□□□□□ -0.54
IRC15	YPL017C	RCK1	P38622	512 aa		11.67	□□□□□ -0.54
IRC15	YPL017C	SPF1	P39986	1215 aa	Known RBP	11.67	□□□□□ -0.54
IRC15	YPL017C	YEL020C	P39994	560 aa		11.67	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 51.6 ms