RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCL1	YOL010W	YDR541C	Q03049	344 aa		4.57	□□□□□ -1.68
RCL1	YOL010W	ENT5	Q03769	411 aa	Known RBP	4.57	□□□□□ -1.68
RCL1	YOL010W	IVY1	Q04934	453 aa		4.57	□□□□□ -1.68
RCL1	YOL010W	LEU9	Q12166	604 aa	Known RBP	4.57	□□□□□ -1.68
RCL1	YOL010W	CDC31	P06704	161 aa	Known RBP	4.56	□□□□□ -1.68
RCL1	YOL010W	PMS1	P14242	873 aa		4.56	□□□□□ -1.68
RCL1	YOL010W	MEI4	P29467	408 aa		4.56	□□□□□ -1.68
RCL1	YOL010W	IME2	P32581	645 aa		4.56	□□□□□ -1.68
RCL1	YOL010W	PPG1	P32838	368 aa		4.56	□□□□□ -1.68
RCL1	YOL010W	ATO2	P32907	282 aa		4.56	□□□□□ -1.68
RCL1	YOL010W	KHA1	P40309	873 aa		4.56	□□□□□ -1.68
RCL1	YOL010W	ELO3	P40319	345 aa		4.56	□□□□□ -1.68
RCL1	YOL010W	YJL107C	P42947	387 aa		4.56	□□□□□ -1.68
RCL1	YOL010W	JHD2	P47156	728 aa	Predicted RBP	4.56	□□□□□ -1.68
RCL1	YOL010W	RFX1	P48743	811 aa		4.56	□□□□□ -1.68
RCL1	YOL010W	YGR127W	P53275	312 aa		4.56	□□□□□ -1.68
RCL1	YOL010W	VPS9	P54787	451 aa		4.56	□□□□□ -1.68
RCL1	YOL010W	CTK1	Q03957	528 aa	Known RBP	4.56	□□□□□ -1.68
RCL1	YOL010W	GLO2	Q05584	274 aa		4.56	□□□□□ -1.68
RCL1	YOL010W	AAD15	Q08361	143 aa		4.56	□□□□□ -1.68
RCL1	YOL010W	BUD7	Q08754	746 aa		4.56	□□□□□ -1.68
RCL1	YOL010W	DAS2	Q12084	232 aa		4.56	□□□□□ -1.68
RCL1	YOL010W	PNO1	Q99216	274 aa	Known RBP	4.56	□□□□□ -1.68
RCL1	YOL010W	IZH4	Q99393	312 aa		4.56	□□□□□ -1.68
RCL1	YOL010W	CYR1	P08678	2026 aa	Known RBP	4.56	□□□□□ -1.68
RCL1	YOL010W	GCR1	P07261	785 aa		4.55	□□□□□ -1.68
RCL1	YOL010W	PHO2	P07269	559 aa		4.55	□□□□□ -1.68
RCL1	YOL010W	FUR1	P18562	216 aa	Known RBP	4.55	□□□□□ -1.68
RCL1	YOL010W	HXT3	P32466	567 aa	Known RBP	4.55	□□□□□ -1.68
RCL1	YOL010W	PEX5	P35056	612 aa		4.55	□□□□□ -1.68
RCL1	YOL010W	YRO2	P38079	344 aa		4.55	□□□□□ -1.68
RCL1	YOL010W	RKM3	P38222	552 aa		4.55	□□□□□ -1.68
RCL1	YOL010W	AIM18	P38884	321 aa		4.55	□□□□□ -1.68
RCL1	YOL010W	YHR218W	P38899	603 aa		4.55	□□□□□ -1.68
RCL1	YOL010W	PMT4	P46971	762 aa		4.55	□□□□□ -1.68
RCL1	YOL010W	YJL049W	P47048	450 aa		4.55	□□□□□ -1.68
RCL1	YOL010W	SAP4	P53036	818 aa		4.55	□□□□□ -1.68
RCL1	YOL010W	ZRG17	P53735	605 aa		4.55	□□□□□ -1.68
RCL1	YOL010W	YNL058C	P53947	316 aa		4.55	□□□□□ -1.68
RCL1	YOL010W	PRO2	P54885	456 aa	Known RBP	4.55	□□□□□ -1.68
RCL1	YOL010W	CCE1	Q03702	353 aa		4.55	□□□□□ -1.68
RCL1	YOL010W	THI7	Q05998	598 aa		4.55	□□□□□ -1.68
RCL1	YOL010W	YOL107W	Q12239	342 aa		4.55	□□□□□ -1.68
RCL1	YOL010W	TPO4	Q12256	659 aa		4.55	□□□□□ -1.68
RCL1	YOL010W	HSH49	Q99181	213 aa	Predicted RBP	4.55	□□□□□ -1.68
RCL1	YOL010W	NOP14	Q99207	810 aa	Known RBP	4.55	□□□□□ -1.68
RCL1	YOL010W	PRP2	P20095	876 aa	Predicted RBP	4.54	□□□□□ -1.68
RCL1	YOL010W	ROX1	P25042	368 aa		4.54	□□□□□ -1.68
RCL1	YOL010W	RPC82	P32349	654 aa		4.54	□□□□□ -1.68
RCL1	YOL010W	KRE6	P32486	720 aa		4.54	□□□□□ -1.68
RCL1	YOL010W	YBL055C	P34220	418 aa	Predicted RBP	4.54	□□□□□ -1.68
RCL1	YOL010W	RPC37	P36121	282 aa		4.54	□□□□□ -1.68
RCL1	YOL010W	VHC1	P38329	1120 aa		4.54	□□□□□ -1.68
RCL1	YOL010W	RRT2	P38332	387 aa		4.54	□□□□□ -1.68
RCL1	YOL010W	SIC1	P38634	284 aa		4.54	□□□□□ -1.68
RCL1	YOL010W	HIS2	P38635	335 aa		4.54	□□□□□ -1.68
RCL1	YOL010W	DIA4	P38705	446 aa	Predicted RBP	4.54	□□□□□ -1.68
RCL1	YOL010W	RPS26A	P39938	119 aa	Known RBP	4.54	□□□□□ -1.68
RCL1	YOL010W	RPS26B	P39939	119 aa	Known RBP	4.54	□□□□□ -1.68
RCL1	YOL010W	YEL020C	P39994	560 aa		4.54	□□□□□ -1.68
RCL1	YOL010W	IBA57	P47158	497 aa		4.54	□□□□□ -1.68
RCL1	YOL010W	OCA1	P50946	238 aa	Predicted RBP	4.54	□□□□□ -1.68
RCL1	YOL010W	SGF73	P53165	657 aa		4.54	□□□□□ -1.68
RCL1	YOL010W	NOG2	P53742	486 aa	Known RBP	4.54	□□□□□ -1.68
RCL1	YOL010W	BSC5	P53755	489 aa		4.54	□□□□□ -1.68
RCL1	YOL010W	CDC14	Q00684	551 aa		4.54	□□□□□ -1.68
RCL1	YOL010W	MRS2	Q01926	470 aa		4.54	□□□□□ -1.68
RCL1	YOL010W	RNT1	Q02555	471 aa		4.54	□□□□□ -1.68
RCL1	YOL010W	ARP9	Q05123	467 aa		4.54	□□□□□ -1.68
RCL1	YOL010W	VPS38	Q05919	439 aa		4.54	□□□□□ -1.68
RCL1	YOL010W	NFI1	Q12216	726 aa		4.54	□□□□□ -1.68
RCL1	YOL010W	RUD3	Q12234	484 aa	Known RBP	4.54	□□□□□ -1.68
RCL1	YOL010W	GAL7	P08431	366 aa		4.53	□□□□□ -1.68
RCL1	YOL010W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
RCL1	YOL010W	SFL1	P20134	766 aa		4.53	□□□□□ -1.68
RCL1	YOL010W	SLY1	P22213	666 aa		4.53	□□□□□ -1.68
RCL1	YOL010W	DPB3	P27344	201 aa		4.53	□□□□□ -1.68
RCL1	YOL010W	SRB4	P32569	687 aa		4.53	□□□□□ -1.68
RCL1	YOL010W	SFC1	P33303	322 aa		4.53	□□□□□ -1.68
RCL1	YOL010W	YHR020W	P38708	688 aa	Known RBP	4.53	□□□□□ -1.68
RCL1	YOL010W	OTU2	P38747	307 aa	Known RBP	4.53	□□□□□ -1.68
RCL1	YOL010W	UBA4	P38820	440 aa		4.53	□□□□□ -1.68
RCL1	YOL010W	YEL057C	P39983	233 aa		4.53	□□□□□ -1.68
RCL1	YOL010W	GIM4	P40005	111 aa	Known RBP	4.53	□□□□□ -1.68
RCL1	YOL010W	URM1	P40554	99 aa	Predicted RBP	4.53	□□□□□ -1.68
RCL1	YOL010W	TIM54	P47045	478 aa		4.53	□□□□□ -1.68
RCL1	YOL010W	YML6	P51998	286 aa		4.53	□□□□□ -1.68
RCL1	YOL010W	FHN1	P53279	174 aa		4.53	□□□□□ -1.68
RCL1	YOL010W	ERG5	P54781	538 aa		4.53	□□□□□ -1.68
RCL1	YOL010W	SED5	Q01590	340 aa		4.53	□□□□□ -1.68
RCL1	YOL010W	RLI1	Q03195	608 aa	Known RBP	4.53	□□□□□ -1.68
RCL1	YOL010W	RRB1	Q04225	511 aa	Known RBP	4.53	□□□□□ -1.68
RCL1	YOL010W	IRC13	Q08630	104 aa		4.53	□□□□□ -1.68
RCL1	YOL010W	COX17	Q12287	69 aa		4.53	□□□□□ -1.68
RCL1	YOL010W	YLR462W	O13556	202 aa		4.52	□□□□□ -1.69
RCL1	YOL010W	SEM1	O94742	89 aa		4.52	□□□□□ -1.69
RCL1	YOL010W	TRX2	P22803	104 aa	Known RBP	4.52	□□□□□ -1.69
RCL1	YOL010W	YSP3	P25036	478 aa		4.52	□□□□□ -1.69
RCL1	YOL010W	MRPL9	P31334	269 aa		4.52	□□□□□ -1.69
RCL1	YOL010W	MEI5	P32489	222 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms