RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W YMR155WQ03795 547 aa5.96□□□□□ -1.46
CAF40YNL288W TRM12Q04235 462 aa5.96□□□□□ -1.46
CAF40YNL288W VAM6Q07468 1049 aa5.96□□□□□ -1.46
CAF40YNL288W NBA1Q08229 501 aaKnown RBP5.96□□□□□ -1.46
CAF40YNL288W RTK1Q12100 620 aaPredicted RBP5.96□□□□□ -1.46
CAF40YNL288W UPC2Q12151 913 aa5.96□□□□□ -1.46
CAF40YNL288W AHA1Q12449 350 aaKnown RBP5.96□□□□□ -1.46
CAF40YNL288W HSH49Q99181 213 aaPredicted RBP5.96□□□□□ -1.46
CAF40YNL288W RHO2P06781 192 aa5.95□□□□□ -1.46
CAF40YNL288W HSC82P15108 705 aaKnown RBP5.95□□□□□ -1.46
CAF40YNL288W PET112P33893 541 aa5.95□□□□□ -1.46
CAF40YNL288W PIM1P36775 1133 aa5.95□□□□□ -1.46
CAF40YNL288W CCZ1P38273 704 aa5.95□□□□□ -1.46
CAF40YNL288W DED81P38707 554 aaKnown RBP5.95□□□□□ -1.46
CAF40YNL288W NPT1P39683 429 aaKnown RBP5.95□□□□□ -1.46
CAF40YNL288W OAF1P39720 1047 aaPredicted RBP5.95□□□□□ -1.46
CAF40YNL288W YAL037WP39728 267 aa5.95□□□□□ -1.46
CAF40YNL288W SSU1P41930 458 aa5.95□□□□□ -1.46
CAF40YNL288W PFA3P42836 336 aa5.95□□□□□ -1.46
CAF40YNL288W FET5P43561 622 aa5.95□□□□□ -1.46
CAF40YNL288W TRS85P46944 698 aa5.95□□□□□ -1.46
CAF40YNL288W TAF6P53040 516 aa5.95□□□□□ -1.46
CAF40YNL288W TNA1P53322 534 aa5.95□□□□□ -1.46
CAF40YNL288W SUN4P53616 420 aa5.95□□□□□ -1.46
CAF40YNL288W EGD1Q02642 157 aaKnown RBP5.95□□□□□ -1.46
CAF40YNL288W RNY1Q02933 434 aaKnown RBP5.95□□□□□ -1.46
CAF40YNL288W YML096WQ04489 525 aa5.95□□□□□ -1.46
CAF40YNL288W RRP42Q12277 265 aaPredicted RBP5.95□□□□□ -1.46
CAF40YNL288W YPL247CQ12523 523 aa5.95□□□□□ -1.46
CAF40YNL288W FUM1P08417 488 aaKnown RBP5.94□□□□□ -1.46
CAF40YNL288W ARG1P22768 420 aa5.94□□□□□ -1.46
CAF40YNL288W PPH21P23594 369 aa5.94□□□□□ -1.46
CAF40YNL288W CRM1P30822 1084 aaKnown RBP5.94□□□□□ -1.46
CAF40YNL288W LOS1P33418 1100 aaPredicted RBP5.94□□□□□ -1.46
CAF40YNL288W NUP120P35729 1037 aa5.94□□□□□ -1.46
CAF40YNL288W DEF1P35732 738 aaKnown RBP5.94□□□□□ -1.46
CAF40YNL288W UTH1P36135 365 aa5.94□□□□□ -1.46
CAF40YNL288W TRM7P38238 310 aaKnown RBP5.94□□□□□ -1.46
CAF40YNL288W YHR127WP38833 243 aaKnown RBP5.94□□□□□ -1.46
CAF40YNL288W UTP9P38882 575 aaKnown RBP5.94□□□□□ -1.46
CAF40YNL288W CIN4P39110 191 aa5.94□□□□□ -1.46
CAF40YNL288W ERV46P39727 415 aa5.94□□□□□ -1.46
CAF40YNL288W EMP65P40085 556 aa5.94□□□□□ -1.46
CAF40YNL288W MGS1P40151 587 aa5.94□□□□□ -1.46
CAF40YNL288W COA1P40452 197 aa5.94□□□□□ -1.46
CAF40YNL288W YPS6P40583 537 aa5.94□□□□□ -1.46
CAF40YNL288W YRB1P41920 201 aaKnown RBP5.94□□□□□ -1.46
CAF40YNL288W CIS3P47001 227 aa5.94□□□□□ -1.46
CAF40YNL288W YJR149WP47177 404 aa5.94□□□□□ -1.46
CAF40YNL288W TIS11P47977 285 aa5.94□□□□□ -1.46
CAF40YNL288W MPS2P53159 387 aa5.94□□□□□ -1.46
CAF40YNL288W YGR015CP53208 328 aa5.94□□□□□ -1.46
CAF40YNL288W UBX4P54730 416 aa5.94□□□□□ -1.46
CAF40YNL288W ECM9Q02202 377 aa5.94□□□□□ -1.46
CAF40YNL288W ROT1Q03691 256 aa5.94□□□□□ -1.46
CAF40YNL288W EAF1Q06337 982 aa5.94□□□□□ -1.46
CAF40YNL288W RSC58Q07979 502 aa5.94□□□□□ -1.46
CAF40YNL288W TMA46Q12000 345 aaKnown RBP5.94□□□□□ -1.46
CAF40YNL288W ATG29Q12092 213 aa5.94□□□□□ -1.46
CAF40YNL288W SUL2Q12325 893 aa5.94□□□□□ -1.46
CAF40YNL288W BRR1Q99177 341 aaPredicted RBP5.94□□□□□ -1.46
CAF40YNL288W STE3P06783 470 aa5.93□□□□□ -1.46
CAF40YNL288W CDC21P06785 304 aa5.93□□□□□ -1.46
CAF40YNL288W RED1P14291 827 aa5.93□□□□□ -1.46
CAF40YNL288W CLN2P20438 545 aa5.93□□□□□ -1.46
CAF40YNL288W SEC15P22224 910 aa5.93□□□□□ -1.46
CAF40YNL288W COX13P32799 129 aa5.93□□□□□ -1.46
CAF40YNL288W PTH2P34222 208 aa5.93□□□□□ -1.46
CAF40YNL288W NTR2P36118 322 aaPredicted RBP5.93□□□□□ -1.46
CAF40YNL288W SOL2P37262 315 aa5.93□□□□□ -1.46
CAF40YNL288W YPT35P38815 214 aaKnown RBP5.93□□□□□ -1.46
CAF40YNL288W ZIM17P42844 174 aa5.93□□□□□ -1.46
CAF40YNL288W COS12P53053 380 aa5.93□□□□□ -1.46
CAF40YNL288W MDM34P53083 459 aa5.93□□□□□ -1.46
CAF40YNL288W SLM2P53955 656 aa5.93□□□□□ -1.46
CAF40YNL288W LSM3P57743 89 aaKnown RBP5.93□□□□□ -1.46
CAF40YNL288W RHO3Q00245 231 aaKnown RBP5.93□□□□□ -1.46
CAF40YNL288W YML131WQ03102 365 aa5.93□□□□□ -1.46
CAF40YNL288W YML119WQ03208 357 aa5.93□□□□□ -1.46
CAF40YNL288W TVP15Q03860 143 aa5.93□□□□□ -1.46
CAF40YNL288W BNA5Q05979 453 aa5.93□□□□□ -1.46
CAF40YNL288W YDL121CQ07541 149 aa5.93□□□□□ -1.46
CAF40YNL288W PFA4Q12006 378 aa5.93□□□□□ -1.46
CAF40YNL288W YDR056CQ12025 205 aa5.93□□□□□ -1.46
CAF40YNL288W APC9Q12107 265 aa5.93□□□□□ -1.46
CAF40YNL288W PST1Q12355 444 aa5.93□□□□□ -1.46
CAF40YNL288W FMP27Q06179 2628 aa5.93□□□□□ -1.46
CAF40YNL288W RPL40AP0CH08 128 aaKnown RBP5.92□□□□□ -1.46
CAF40YNL288W RPL40BP0CH09 128 aaKnown RBP5.92□□□□□ -1.46
CAF40YNL288W PRP16P15938 1071 aaPredicted RBP5.92□□□□□ -1.46
CAF40YNL288W GAS1P22146 559 aaKnown RBP5.92□□□□□ -1.46
CAF40YNL288W CDC10P25342 322 aaKnown RBP5.92□□□□□ -1.46
CAF40YNL288W RNQ1P25367 405 aa5.92□□□□□ -1.46
CAF40YNL288W MLS1P30952 554 aa5.92□□□□□ -1.46
CAF40YNL288W MGM101P32787 269 aaKnown RBP5.92□□□□□ -1.46
CAF40YNL288W MRE11P32829 692 aa5.92□□□□□ -1.46
CAF40YNL288W RPS1AP33442 255 aaKnown RBP5.92□□□□□ -1.46
CAF40YNL288W ARA1P38115 344 aa5.92□□□□□ -1.46
CAF40YNL288W INM1P38710 295 aa5.92□□□□□ -1.46
CAF40YNL288W NDE1P40215 560 aa5.92□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms