RNA–Protein interactions for RNA: YMR198W

CIK1, Transcript of Kinesin-associated protein, yeastyeast

Gene CIK1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIK1YMR198W DRN1P53255 507 aaKnown RBP3.23□□□□□ -1.89
CIK1YMR198W BNI5P53890 448 aaKnown RBP3.23□□□□□ -1.89
CIK1YMR198W PEX25Q02969 394 aa3.23□□□□□ -1.89
CIK1YMR198W ENT4Q07872 247 aa3.23□□□□□ -1.89
CIK1YMR198W CFT2Q12102 859 aaPredicted RBP3.23□□□□□ -1.89
CIK1YMR198W GCN4P03069 281 aa3.23□□□□□ -1.89
CIK1YMR198W ARG3P05150 338 aa3.23□□□□□ -1.89
CIK1YMR198W APE1P14904 514 aa3.23□□□□□ -1.89
CIK1YMR198W ROX1P25042 368 aa3.23□□□□□ -1.89
CIK1YMR198W BUD5P25300 642 aaPredicted RBP3.23□□□□□ -1.89
CIK1YMR198W OSH3P38713 996 aaKnown RBP3.23□□□□□ -1.89
CIK1YMR198W YJL132WP47014 750 aa3.23□□□□□ -1.89
CIK1YMR198W YGL082WP53155 381 aa3.23□□□□□ -1.89
CIK1YMR198W RPT6Q01939 405 aaKnown RBP3.23□□□□□ -1.89
CIK1YMR198W HOT1Q03213 719 aa3.23□□□□□ -1.89
CIK1YMR198W RNH1Q04740 348 aa3.23□□□□□ -1.89
CIK1YMR198W YPL272CQ08984 517 aa3.23□□□□□ -1.89
CIK1YMR198W NCE102Q12207 173 aaRIP-Chip data3.23□□□□□ -1.89not detected
CIK1YMR198W NFI1Q12216 726 aa3.23□□□□□ -1.89
CIK1YMR198W RTN2Q12443 393 aa3.23□□□□□ -1.89
CIK1YMR198W CHD1P32657 1468 aa3.22□□□□□ -1.89
CIK1YMR198W RPL20AP0CX23 172 aaKnown RBP3.22□□□□□ -1.89
CIK1YMR198W RPL20BP0CX24 172 aaPredicted RBP3.22□□□□□ -1.89
CIK1YMR198W ADH7P25377 361 aa3.22□□□□□ -1.89
CIK1YMR198W GPI10P30777 616 aa3.22□□□□□ -1.89
CIK1YMR198W PUP2P32379 260 aa3.22□□□□□ -1.89
CIK1YMR198W SAC6P32599 642 aaKnown RBP3.22□□□□□ -1.89
CIK1YMR198W RIB7P33312 244 aa3.22□□□□□ -1.89
CIK1YMR198W NUP133P36161 1157 aa3.22□□□□□ -1.89
CIK1YMR198W IDP2P41939 412 aa3.22□□□□□ -1.89
CIK1YMR198W DPB4Q04603 196 aaKnown RBP3.22□□□□□ -1.89
CIK1YMR198W YLR345WQ06137 509 aa3.22□□□□□ -1.89
CIK1YMR198W RRP36Q12481 300 aaPredicted RBP3.22□□□□□ -1.89
CIK1YMR198W PUP3P25451 205 aaKnown RBP3.21□□□□□ -1.9
CIK1YMR198W POL4P25615 582 aa3.21□□□□□ -1.9
CIK1YMR198W DAL80P26343 269 aa3.21□□□□□ -1.9
CIK1YMR198W YNK1P36010 153 aaKnown RBP3.21□□□□□ -1.9
CIK1YMR198W LCB2P40970 561 aa3.21□□□□□ -1.9
CIK1YMR198W YJL055WP47044 245 aa3.21□□□□□ -1.9
CIK1YMR198W SHE10P53075 577 aa3.21□□□□□ -1.9
CIK1YMR198W BSC5P53755 489 aa3.21□□□□□ -1.9
CIK1YMR198W BNA5Q05979 453 aa3.21□□□□□ -1.9
CIK1YMR198W PLP2Q12017 286 aa3.21□□□□□ -1.9
CIK1YMR198W YCL021W-AQ96VH3 125 aa3.21□□□□□ -1.9
CIK1YMR198W VMA16P23968 213 aa3.2□□□□□ -1.9
CIK1YMR198W SMI1P32566 505 aa3.2□□□□□ -1.9
CIK1YMR198W TFB1P32776 642 aa3.2□□□□□ -1.9
CIK1YMR198W YBL055CP34220 418 aaPredicted RBP3.2□□□□□ -1.9
CIK1YMR198W UIP5P36137 443 aa3.2□□□□□ -1.9
CIK1YMR198W OGG1P53397 376 aaPredicted RBP3.2□□□□□ -1.9
CIK1YMR198W EFM6P53970 246 aa3.2□□□□□ -1.9
CIK1YMR198W ADA2Q02336 434 aa3.2□□□□□ -1.9
CIK1YMR198W YPR172WQ06608 200 aa3.2□□□□□ -1.9
CIK1YMR198W SYO1Q07395 620 aa3.2□□□□□ -1.9
CIK1YMR198W ETT1Q08421 412 aaKnown RBP3.2□□□□□ -1.9
CIK1YMR198W HUA2Q12134 243 aa3.2□□□□□ -1.9
CIK1YMR198W SKM1Q12469 655 aa3.2□□□□□ -1.9
CIK1YMR198W FRE6Q12473 712 aa3.2□□□□□ -1.9
CIK1YMR198W SEC53P07283 254 aaKnown RBP3.2□□□□□ -1.9
CIK1YMR198W RNA14P25298 677 aaKnown RBP3.2□□□□□ -1.9
CIK1YMR198W RAD51P25454 400 aa3.2□□□□□ -1.9
CIK1YMR198W LDB16P25587 256 aa3.2□□□□□ -1.9
CIK1YMR198W ADK2P26364 225 aa3.2□□□□□ -1.9
CIK1YMR198W MRPL4P36517 319 aa3.2□□□□□ -1.9
CIK1YMR198W YHR131CP38835 850 aa3.2□□□□□ -1.9
CIK1YMR198W BFR1P38934 470 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
CIK1YMR198W SPO22P40511 975 aa3.2□□□□□ -1.9
CIK1YMR198W SCD6P45978 349 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9 RIP-Chip
CIK1YMR198W APT1P49435 187 aaKnown RBP3.2□□□□□ -1.9
CIK1YMR198W DUO1P53168 247 aaKnown RBP3.2□□□□□ -1.9
CIK1YMR198W ART5P53244 586 aaKnown RBP3.2□□□□□ -1.9
CIK1YMR198W DUG3P53871 357 aa3.2□□□□□ -1.9
CIK1YMR198W ALF1P53904 254 aa3.2□□□□□ -1.9
CIK1YMR198W EOS1P53938 366 aa3.2□□□□□ -1.9
CIK1YMR198W CWC21Q03375 135 aaKnown RBP3.2□□□□□ -1.9
CIK1YMR198W AIM32Q04689 311 aa3.2□□□□□ -1.9
CIK1YMR198W GLO2Q05584 274 aa3.2□□□□□ -1.9
CIK1YMR198W KEL3Q08979 651 aaPredicted RBP3.2□□□□□ -1.9
CIK1YMR198W RRP7P25368 297 aaPredicted RBP3.19□□□□□ -1.9
CIK1YMR198W SPB1P25582 841 aaPredicted RBP3.19□□□□□ -1.9
CIK1YMR198W PMU1P36069 295 aa3.19□□□□□ -1.9
CIK1YMR198W LAS1P36146 502 aaPredicted RBP3.19□□□□□ -1.9
CIK1YMR198W APE3P37302 537 aaKnown RBP3.19□□□□□ -1.9
CIK1YMR198W MKT1P40850 830 aaKnown RBP3.19□□□□□ -1.9
CIK1YMR198W MNP1P53163 194 aaPredicted RBP3.19□□□□□ -1.9
CIK1YMR198W VPS75P53853 264 aa3.19□□□□□ -1.9
CIK1YMR198W JJJ1P53863 590 aa3.19□□□□□ -1.9
CIK1YMR198W OAZ1Q02803 292 aa3.19□□□□□ -1.9
CIK1YMR198W YPL107WQ02873 248 aa3.19□□□□□ -1.9
CIK1YMR198W RAD30Q04049 632 aa3.19□□□□□ -1.9
CIK1YMR198W GYL1Q04322 720 aa3.19□□□□□ -1.9
CIK1YMR198W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
CIK1YMR198W PEP5P12868 1029 aa3.18□□□□□ -1.9
CIK1YMR198W KAR3P17119 729 aa3.18□□□□□ -1.9
CIK1YMR198W OCA4P25366 362 aa3.18□□□□□ -1.9
CIK1YMR198W POT1P27796 417 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
CIK1YMR198W SSE1P32589 693 aaKnown RBP3.18□□□□□ -1.9
CIK1YMR198W FRE1P32791 686 aa3.18□□□□□ -1.9
CIK1YMR198W PPQ1P32945 549 aa3.18□□□□□ -1.9
CIK1YMR198W NIP100P33420 868 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms