RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W POL4P25615 582 aa2.5□□□□□ -2.01
DDR48YMR173W PAP1P29468 568 aaKnown RBP2.5□□□□□ -2.01
DDR48YMR173W CRM1P30822 1084 aaKnown RBP2.5□□□□□ -2.01
DDR48YMR173W PRS1P32895 427 aaKnown RBP2.5□□□□□ -2.01
DDR48YMR173W UBP11P36026 717 aa2.5□□□□□ -2.01
DDR48YMR173W SRO77P38163 1010 aa2.5□□□□□ -2.01
DDR48YMR173W MTC6P38849 526 aa2.5□□□□□ -2.01
DDR48YMR173W GCD10P41814 478 aa2.5□□□□□ -2.01
DDR48YMR173W RRT5P43607 289 aa2.5□□□□□ -2.01
DDR48YMR173W VID30P53076 958 aa2.5□□□□□ -2.01
DDR48YMR173W YLR152CP54072 576 aa2.5□□□□□ -2.01
DDR48YMR173W YBR126W-AQ8TGU7 68 aa2.5□□□□□ -2.01
DDR48YMR173W YPT6Q99260 215 aa2.5□□□□□ -2.01
DDR48YMR173W SOD1P00445 154 aaKnown RBP2.49□□□□□ -2.01
DDR48YMR173W CDC16P09798 840 aa2.49□□□□□ -2.01
DDR48YMR173W PRD1P25375 712 aa2.49□□□□□ -2.01
DDR48YMR173W BUB3P26449 341 aa2.49□□□□□ -2.01
DDR48YMR173W SDH3P33421 198 aa2.49□□□□□ -2.01
DDR48YMR173W SEF1P34228 1148 aa2.49□□□□□ -2.01
DDR48YMR173W MSR1P38714 643 aa2.49□□□□□ -2.01
DDR48YMR173W NDT80P38830 627 aa2.49□□□□□ -2.01
DDR48YMR173W ALG5P40350 334 aa2.49□□□□□ -2.01
DDR48YMR173W URB2P47108 1174 aa2.49□□□□□ -2.01
DDR48YMR173W ART5P53244 586 aaKnown RBP2.49□□□□□ -2.01
DDR48YMR173W MEP3P53390 489 aa2.49□□□□□ -2.01
DDR48YMR173W IBD2P53892 351 aa2.49□□□□□ -2.01
DDR48YMR173W SLG1P54867 378 aa2.49□□□□□ -2.01
DDR48YMR173W RRG7Q08774 242 aaPredicted RBP2.49□□□□□ -2.01
DDR48YMR173W HRT3Q12347 344 aa2.49□□□□□ -2.01
DDR48YMR173W SGS1P35187 1447 aa2.49□□□□□ -2.01
DDR48YMR173W CHS1P08004 1131 aa2.48□□□□□ -2.01
DDR48YMR173W YIL067CP40514 678 aa2.48□□□□□ -2.01
DDR48YMR173W DUO1P53168 247 aaKnown RBP2.48□□□□□ -2.01
DDR48YMR173W PIR3Q03180 325 aa2.48□□□□□ -2.01
DDR48YMR173W YJR112W-AQ3E743 109 aa2.48□□□□□ -2.01
DDR48YMR173W SEM1O94742 89 aa2.47□□□□□ -2.01
DDR48YMR173W DPB3P27344 201 aa2.47□□□□□ -2.01
DDR48YMR173W NDI1P32340 513 aa2.47□□□□□ -2.01
DDR48YMR173W ATP11P32453 318 aa2.47□□□□□ -2.01
DDR48YMR173W GLC7P32598 312 aaKnown RBP2.47□□□□□ -2.01
DDR48YMR173W TCD2P36101 447 aaKnown RBP2.47□□□□□ -2.01
DDR48YMR173W SWD3P38123 315 aa2.47□□□□□ -2.01
DDR48YMR173W ERP2P39704 215 aa2.47□□□□□ -2.01
DDR48YMR173W IMD4P50094 524 aaKnown RBP2.47□□□□□ -2.01
DDR48YMR173W AVT4P50944 713 aa2.47□□□□□ -2.01
DDR48YMR173W ZPR1P53303 486 aaKnown RBP2.47□□□□□ -2.01
DDR48YMR173W NGL3Q03210 505 aa2.47□□□□□ -2.01
DDR48YMR173W IOC4Q04213 475 aa2.47□□□□□ -2.01
DDR48YMR173W MFB1Q04922 465 aa2.47□□□□□ -2.01
DDR48YMR173W MRPL35Q06678 367 aa2.47□□□□□ -2.01
DDR48YMR173W TMC1Q08422 150 aaPredicted RBP2.47□□□□□ -2.01
DDR48YMR173W THP3Q12049 470 aaKnown RBP2.47□□□□□ -2.01
DDR48YMR173W RKM5Q12367 367 aa2.47□□□□□ -2.01
DDR48YMR173W NAT1P12945 854 aaKnown RBP2.46□□□□□ -2.02
DDR48YMR173W CPR4P25334 318 aa2.46□□□□□ -2.02
DDR48YMR173W NOP4P37838 685 aaKnown RBP2.46□□□□□ -2.02
DDR48YMR173W MIX23P38162 196 aa2.46□□□□□ -2.02
DDR48YMR173W AFG3P39925 761 aa2.46□□□□□ -2.02
DDR48YMR173W LCL3P53153 274 aa2.46□□□□□ -2.02
DDR48YMR173W YGR066CP53242 292 aa2.46□□□□□ -2.02
DDR48YMR173W IPI3P53877 555 aa2.46□□□□□ -2.02
DDR48YMR173W APJ1P53940 528 aa2.46□□□□□ -2.02
DDR48YMR173W ODC1Q03028 310 aa2.46□□□□□ -2.02
DDR48YMR173W HUA2Q12134 243 aa2.46□□□□□ -2.02
DDR48YMR173W COR1P07256 457 aa2.45□□□□□ -2.02
DDR48YMR173W CDC60P26637 1090 aaKnown RBP2.45□□□□□ -2.02
DDR48YMR173W FRE2P36033 711 aa2.45□□□□□ -2.02
DDR48YMR173W RSM22P36056 628 aa2.45□□□□□ -2.02
DDR48YMR173W NAT2P37293 288 aa2.45□□□□□ -2.02
DDR48YMR173W MBB1P39534 108 aa2.45□□□□□ -2.02
DDR48YMR173W LYS14P40971 790 aa2.45□□□□□ -2.02
DDR48YMR173W YFL067WP43537 175 aa2.45□□□□□ -2.02
DDR48YMR173W TIS11P47977 285 aa2.45□□□□□ -2.02
DDR48YMR173W RPC11Q04307 110 aaPredicted RBP2.45□□□□□ -2.02
DDR48YMR173W YMR018WQ04364 514 aa2.45□□□□□ -2.02
DDR48YMR173W RLM1Q12224 676 aa2.45□□□□□ -2.02
DDR48YMR173W YLR108CQ12259 485 aa2.45□□□□□ -2.02
DDR48YMR173W RBD2Q12270 262 aa2.45□□□□□ -2.02
DDR48YMR173W AVL9Q12500 764 aa2.45□□□□□ -2.02
DDR48YMR173W MES1P00958 751 aaKnown RBP2.44□□□□□ -2.02
DDR48YMR173W CLN3P13365 580 aa2.44□□□□□ -2.02
DDR48YMR173W EST1P17214 699 aaPredicted RBP2.44□□□□□ -2.02
DDR48YMR173W SSH4P32343 579 aa2.44□□□□□ -2.02
DDR48YMR173W MRE11P32829 692 aa2.44□□□□□ -2.02
DDR48YMR173W WBP1P33767 430 aaKnown RBP2.44□□□□□ -2.02
DDR48YMR173W NOP16P40007 231 aaKnown RBP2.44□□□□□ -2.02
DDR48YMR173W YMR147WP40218 223 aaKnown RBP2.44□□□□□ -2.02
DDR48YMR173W TOF1P53840 1238 aa2.44□□□□□ -2.02
DDR48YMR173W YMR027WQ04371 470 aa2.44□□□□□ -2.02
DDR48YMR173W SOV1Q04748 898 aa2.44□□□□□ -2.02
DDR48YMR173W TSR1Q07381 788 aaKnown RBP2.44□□□□□ -2.02
DDR48YMR173W RCN2Q12044 265 aa2.44□□□□□ -2.02
DDR48YMR173W RAV1P47104 1357 aa2.44□□□□□ -2.02
DDR48YMR173W ADH2P00331 348 aaKnown RBP2.43□□□□□ -2.02
DDR48YMR173W SEC53P07283 254 aaKnown RBP2.43□□□□□ -2.02
DDR48YMR173W DFR1P07807 211 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
DDR48YMR173W TRX2P22803 104 aaKnown RBP2.43□□□□□ -2.02
DDR48YMR173W SPS22P25380 463 aa2.43□□□□□ -2.02
DDR48YMR173W MCM10P32354 571 aa2.43□□□□□ -2.02
DDR48YMR173W PAH1P32567 862 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms