RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeastyeast

Gene PKR1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PKR1YMR123W MRPL4P36517 319 aa2.47□□□□□ -2.01
PKR1YMR123W YGR066CP53242 292 aa2.47□□□□□ -2.01
PKR1YMR123W RBG2P53295 368 aaKnown RBP2.47□□□□□ -2.01
PKR1YMR123W RPC11Q04307 110 aaPredicted RBP2.47□□□□□ -2.01
PKR1YMR123W HEL2Q05580 639 aaKnown RBP2.47□□□□□ -2.01
PKR1YMR123W RCN2Q12044 265 aa2.47□□□□□ -2.01
PKR1YMR123W RLM1Q12224 676 aa2.47□□□□□ -2.01
PKR1YMR123W RRP12Q12754 1228 aaKnown RBP2.47□□□□□ -2.01
PKR1YMR123W THO2P53552 1597 aaKnown RBP2.47□□□□□ -2.01
PKR1YMR123W HIR3P47171 1648 aa2.46□□□□□ -2.02
PKR1YMR123W SPT15P13393 240 aaKnown RBP2.46□□□□□ -2.02
PKR1YMR123W CPR1P14832 162 aaKnown RBP2.46□□□□□ -2.02
PKR1YMR123W WBP1P33767 430 aaKnown RBP2.46□□□□□ -2.02
PKR1YMR123W FAU1P40099 211 aa2.46□□□□□ -2.02
PKR1YMR123W BTN2P53286 410 aa2.46□□□□□ -2.02
PKR1YMR123W ZPR1P53303 486 aaKnown RBP2.46□□□□□ -2.02
PKR1YMR123W CTI6Q08923 506 aa2.46□□□□□ -2.02
PKR1YMR123W AVL9Q12500 764 aa2.46□□□□□ -2.02
PKR1YMR123W HIP1P06775 603 aa2.45□□□□□ -2.02
PKR1YMR123W COR1P07256 457 aa2.45□□□□□ -2.02
PKR1YMR123W DFR1P07807 211 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
PKR1YMR123W OLE1P21147 510 aaKnown RBP2.45□□□□□ -2.02
PKR1YMR123W BUB3P26449 341 aa2.45□□□□□ -2.02
PKR1YMR123W YME1P32795 747 aa2.45□□□□□ -2.02
PKR1YMR123W MRP4P32902 394 aa2.45□□□□□ -2.02
PKR1YMR123W RFS1P38234 210 aaKnown RBP2.45□□□□□ -2.02
PKR1YMR123W MBB1P39534 108 aa2.45□□□□□ -2.02
PKR1YMR123W ERP2P39704 215 aa2.45□□□□□ -2.02
PKR1YMR123W SGN1P40561 250 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
PKR1YMR123W UPF3P48412 387 aaKnown RBP2.45□□□□□ -2.02
PKR1YMR123W MRX6P48564 524 aa2.45□□□□□ -2.02
PKR1YMR123W CAF40P53829 373 aa2.45□□□□□ -2.02
PKR1YMR123W ARK1P53974 638 aa2.45□□□□□ -2.02
PKR1YMR123W SLG1P54867 378 aa2.45□□□□□ -2.02
PKR1YMR123W ADD37Q03233 198 aa2.45□□□□□ -2.02
PKR1YMR123W RRN11Q04712 507 aa2.45□□□□□ -2.02
PKR1YMR123W VPS38Q05919 439 aa2.45□□□□□ -2.02
PKR1YMR123W YOR387CQ08910 206 aa2.45□□□□□ -2.02
PKR1YMR123W ERV2Q12284 196 aa2.45□□□□□ -2.02
PKR1YMR123W RKM5Q12367 367 aa2.45□□□□□ -2.02
PKR1YMR123W MES1P00958 751 aaKnown RBP2.44□□□□□ -2.02
PKR1YMR123W CBS1P14066 229 aa2.44□□□□□ -2.02
PKR1YMR123W HEM15P16622 393 aa2.44□□□□□ -2.02
PKR1YMR123W AAC3P18238 307 aa2.44□□□□□ -2.02
PKR1YMR123W CRM1P30822 1084 aaKnown RBP2.44□□□□□ -2.02
PKR1YMR123W ATP11P32453 318 aa2.44□□□□□ -2.02
PKR1YMR123W MRE11P32829 692 aa2.44□□□□□ -2.02
PKR1YMR123W REG2P38232 338 aa2.44□□□□□ -2.02
PKR1YMR123W DED81P38707 554 aaKnown RBP2.44□□□□□ -2.02
PKR1YMR123W PRE5P40302 234 aaKnown RBP2.44□□□□□ -2.02
PKR1YMR123W GCD10P41814 478 aa2.44□□□□□ -2.02
PKR1YMR123W RRT5P43607 289 aa2.44□□□□□ -2.02
PKR1YMR123W URB2P47108 1174 aa2.44□□□□□ -2.02
PKR1YMR123W OGG1P53397 376 aaPredicted RBP2.44□□□□□ -2.02
PKR1YMR123W PIR3Q03180 325 aa2.44□□□□□ -2.02
PKR1YMR123W MFB1Q04922 465 aa2.44□□□□□ -2.02
PKR1YMR123W YDR056CQ12025 205 aa2.44□□□□□ -2.02
PKR1YMR123W RAV1P47104 1357 aa2.44□□□□□ -2.02
PKR1YMR123W REV3P14284 1504 aa2.43□□□□□ -2.02
PKR1YMR123W HHF1P02309 103 aaKnown RBP2.43□□□□□ -2.02
PKR1YMR123W GAL80P04387 435 aa2.43□□□□□ -2.02
PKR1YMR123W SUP35P05453 685 aaKnown RBP2.43□□□□□ -2.02
PKR1YMR123W YIM1P28625 365 aa2.43□□□□□ -2.02
PKR1YMR123W DEG1P31115 442 aaKnown RBP2.43□□□□□ -2.02
PKR1YMR123W PAD1P33751 242 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
PKR1YMR123W YBL059WP34224 193 aa2.43□□□□□ -2.02
PKR1YMR123W RSM22P36056 628 aa2.43□□□□□ -2.02
PKR1YMR123W VID27P40157 782 aa2.43□□□□□ -2.02
PKR1YMR123W YGR210CP42942 411 aa2.43□□□□□ -2.02
PKR1YMR123W VPS75P53853 264 aa2.43□□□□□ -2.02
PKR1YMR123W SVL3Q03088 825 aaKnown RBP2.43□□□□□ -2.02
PKR1YMR123W PBA1Q05778 276 aa2.43□□□□□ -2.02
PKR1YMR123W ESA1Q08649 445 aa2.43□□□□□ -2.02
PKR1YMR123W ENT1Q12518 454 aa2.43□□□□□ -2.02
PKR1YMR123W YDL007C-AQ2V2Q0 85 aa2.43□□□□□ -2.02
PKR1YMR123W CHS1P08004 1131 aa2.42□□□□□ -2.02
PKR1YMR123W NAM9P27929 486 aa2.42□□□□□ -2.02
PKR1YMR123W ARO2P28777 376 aaKnown RBP2.42□□□□□ -2.02
PKR1YMR123W NDI1P32340 513 aa2.42□□□□□ -2.02
PKR1YMR123W GLC7P32598 312 aaKnown RBP2.42□□□□□ -2.02
PKR1YMR123W YEL045CP32616 141 aa2.42□□□□□ -2.02
PKR1YMR123W FRE2P36033 711 aa2.42□□□□□ -2.02
PKR1YMR123W FAA2P39518 744 aa2.42□□□□□ -2.02
PKR1YMR123W SYG1P40528 902 aa2.42□□□□□ -2.02
PKR1YMR123W MET28P40573 187 aa2.42□□□□□ -2.02
PKR1YMR123W AVT4P50944 713 aa2.42□□□□□ -2.02
PKR1YMR123W ART5P53244 586 aaKnown RBP2.42□□□□□ -2.02
PKR1YMR123W ELP3Q02908 557 aaKnown RBP2.42□□□□□ -2.02
PKR1YMR123W SEC39Q12745 709 aa2.42□□□□□ -2.02
PKR1YMR123W XRN1P22147 1528 aaKnown RBP2.42□□□□□ -2.02
PKR1YMR123W GCN4P03069 281 aa2.41□□□□□ -2.02
PKR1YMR123W RPL31BP0C2H9 113 aaKnown RBP2.41□□□□□ -2.02
PKR1YMR123W ISY1P21374 235 aaPredicted RBP2.41□□□□□ -2.02
PKR1YMR123W PEP3P27801 918 aa2.41□□□□□ -2.02
PKR1YMR123W SRO77P38163 1010 aa2.41□□□□□ -2.02
PKR1YMR123W NDT80P38830 627 aa2.41□□□□□ -2.02
PKR1YMR123W KEL1P38853 1164 aaKnown RBP2.41□□□□□ -2.02
PKR1YMR123W YMR147WP40218 223 aaKnown RBP2.41□□□□□ -2.02
PKR1YMR123W TMA108P40462 946 aa2.41□□□□□ -2.02
PKR1YMR123W YIL067CP40514 678 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms