RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeastyeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CST9YLR394W YOL159C-AQ3E769 90 aa3.3□□□□□ -1.88
CST9YLR394W TY1B-JR2P47100 1755 aaKnown RBP3.3□□□□□ -1.88
CST9YLR394W TY1B-ER2Q03619 1755 aa3.3□□□□□ -1.88
CST9YLR394W TY1B-MR1Q04214 1755 aa3.3□□□□□ -1.88
CST9YLR394W TY1B-MR2Q04670 1755 aaKnown RBP3.3□□□□□ -1.88
CST9YLR394W TY1B-LR1Q12088 1755 aaKnown RBP3.3□□□□□ -1.88
CST9YLR394W TY1B-NL1Q12112 1755 aa3.3□□□□□ -1.88
CST9YLR394W TY1B-GR1Q12141 1755 aa3.3□□□□□ -1.88
CST9YLR394W TY1B-BLQ12490 1755 aa3.3□□□□□ -1.88
CST9YLR394W AMD1P15274 810 aaKnown RBP3.29□□□□□ -1.88
CST9YLR394W ATS1P31386 333 aa3.29□□□□□ -1.88
CST9YLR394W ERG3P32353 365 aa3.29□□□□□ -1.88
CST9YLR394W PMT1P33775 817 aa3.29□□□□□ -1.88
CST9YLR394W SHP1P34223 423 aa3.29□□□□□ -1.88
CST9YLR394W RIM2P38127 377 aa3.29□□□□□ -1.88
CST9YLR394W DUG2P38149 878 aa3.29□□□□□ -1.88
CST9YLR394W RKM3P38222 552 aa3.29□□□□□ -1.88
CST9YLR394W CST26P38226 397 aa3.29□□□□□ -1.88
CST9YLR394W VPS52P39904 641 aa3.29□□□□□ -1.88
CST9YLR394W YJR154WP47181 346 aa3.29□□□□□ -1.88
CST9YLR394W KTR5P53966 522 aaPredicted RBP3.29□□□□□ -1.88
CST9YLR394W HEF3P53978 1044 aaKnown RBP3.29□□□□□ -1.88
CST9YLR394W YDR415CQ04033 374 aaPredicted RBP3.29□□□□□ -1.88
CST9YLR394W THP1Q08231 455 aa3.29□□□□□ -1.88
CST9YLR394W NTE1Q04958 1679 aa3.29□□□□□ -1.88
CST9YLR394W INH1P01097 85 aa3.28□□□□□ -1.88
CST9YLR394W COR1P07256 457 aa3.28□□□□□ -1.88
CST9YLR394W APE1P14904 514 aa3.28□□□□□ -1.88
CST9YLR394W TRS65P32893 560 aa3.28□□□□□ -1.88
CST9YLR394W LOS1P33418 1100 aaPredicted RBP3.28□□□□□ -1.88
CST9YLR394W OSH3P38713 996 aaKnown RBP3.28□□□□□ -1.88
CST9YLR394W BZZ1P38822 633 aa3.28□□□□□ -1.88
CST9YLR394W SMF1P38925 575 aa3.28□□□□□ -1.88
CST9YLR394W VMA13P41807 478 aaKnown RBP3.28□□□□□ -1.88
CST9YLR394W SCD6P45978 349 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88 RIP-Chip
CST9YLR394W CUL3P53202 744 aa3.28□□□□□ -1.88
CST9YLR394W TWF1P53250 332 aa3.28□□□□□ -1.88
CST9YLR394W YGR250CP53316 781 aaKnown RBP3.28□□□□□ -1.88
CST9YLR394W RPM2Q02773 1202 aa3.28□□□□□ -1.88
CST9YLR394W SLD5Q03406 294 aa3.28□□□□□ -1.88
CST9YLR394W BNA5Q05979 453 aa3.28□□□□□ -1.88
CST9YLR394W SEC39Q12745 709 aa3.28□□□□□ -1.88
CST9YLR394W YDL007C-AQ2V2Q0 85 aa3.28□□□□□ -1.88
CST9YLR394W YCR022CP25620 114 aa3.27□□□□□ -1.89
CST9YLR394W SEC66P33754 206 aa3.27□□□□□ -1.89
CST9YLR394W MIC60P36112 540 aa3.27□□□□□ -1.89
CST9YLR394W VID24P38263 362 aa3.27□□□□□ -1.89
CST9YLR394W MBB1P39534 108 aa3.27□□□□□ -1.89
CST9YLR394W CSM2P40465 213 aa3.27□□□□□ -1.89
CST9YLR394W ARF3P40994 183 aaRIP-Chip data3.27□□□□□ -1.89not detected
CST9YLR394W SAD1P43589 448 aa3.27□□□□□ -1.89
CST9YLR394W ALK1P43633 760 aaKnown RBP3.27□□□□□ -1.89
CST9YLR394W ALT2P52892 507 aa3.27□□□□□ -1.89
CST9YLR394W CAF130P53280 1122 aaPredicted RBP3.27□□□□□ -1.89
CST9YLR394W ZPR1P53303 486 aaKnown RBP3.27□□□□□ -1.89
CST9YLR394W RLI1Q03195 608 aaKnown RBP3.27□□□□□ -1.89
CST9YLR394W RBS1Q05672 457 aaKnown RBP3.27□□□□□ -1.89
CST9YLR394W HCR1Q05775 265 aaKnown RBP3.27□□□□□ -1.89
CST9YLR394W DAP1Q12091 152 aa3.27□□□□□ -1.89
CST9YLR394W RPO21P04050 1733 aaKnown RBP3.27□□□□□ -1.89
CST9YLR394W RPL31BP0C2H9 113 aaKnown RBP3.27□□□□□ -1.89
CST9YLR394W SEC62P21825 274 aa3.27□□□□□ -1.89
CST9YLR394W BUD14P27637 709 aa3.27□□□□□ -1.89
CST9YLR394W ATP11P32453 318 aa3.27□□□□□ -1.89
CST9YLR394W YME1P32795 747 aa3.27□□□□□ -1.89
CST9YLR394W SIP2P34164 415 aaKnown RBP3.27□□□□□ -1.89
CST9YLR394W BNA4P38169 460 aa3.27□□□□□ -1.89
CST9YLR394W PDS5Q04264 1277 aa3.27□□□□□ -1.89
CST9YLR394W YMR317WQ04893 1140 aa3.27□□□□□ -1.89
CST9YLR394W GLO2Q05584 274 aa3.27□□□□□ -1.89
CST9YLR394W PHO92Q06390 306 aa3.27□□□□□ -1.89
CST9YLR394W SYO1Q07395 620 aa3.27□□□□□ -1.89
CST9YLR394W RIM20Q12033 661 aa3.27□□□□□ -1.89
CST9YLR394W ATG29Q12092 213 aa3.27□□□□□ -1.89
CST9YLR394W RKM5Q12367 367 aa3.27□□□□□ -1.89
CST9YLR394W SPP41P38904 1435 aa3.26□□□□□ -1.89
CST9YLR394W YOR093CQ12275 1648 aa3.26□□□□□ -1.89
CST9YLR394W FRE1P32791 686 aa3.26□□□□□ -1.89
CST9YLR394W VPS17P32913 551 aa3.26□□□□□ -1.89
CST9YLR394W CMC1P36064 111 aa3.26□□□□□ -1.89
CST9YLR394W YTA12P40341 825 aa3.26□□□□□ -1.89
CST9YLR394W DIM1P41819 318 aaKnown RBP3.26□□□□□ -1.89
CST9YLR394W IKS1P47042 667 aa3.26□□□□□ -1.89
CST9YLR394W YTH1Q06102 208 aaPredicted RBP3.26□□□□□ -1.89
CST9YLR394W YEH2Q07950 538 aa3.26□□□□□ -1.89
CST9YLR394W RTN2Q12443 393 aa3.26□□□□□ -1.89
CST9YLR394W YMR230W-AQ3E7B5 62 aa3.26□□□□□ -1.89
CST9YLR394W DOP1Q03921 1698 aa3.26□□□□□ -1.89
CST9YLR394W RED1P14291 827 aa3.25□□□□□ -1.89
CST9YLR394W SUI2P20459 304 aaKnown RBP3.25□□□□□ -1.89
CST9YLR394W YCR007CP25354 239 aa3.25□□□□□ -1.89
CST9YLR394W UTR4P32626 227 aa3.25□□□□□ -1.89
CST9YLR394W YJL070CP40361 888 aa3.25□□□□□ -1.89
CST9YLR394W YJL068CP40363 299 aa3.25□□□□□ -1.89
CST9YLR394W SYF1Q04048 859 aaPredicted RBP3.25□□□□□ -1.89
CST9YLR394W RQC1Q05468 723 aaKnown RBP3.25□□□□□ -1.89
CST9YLR394W GRS2Q06817 618 aa3.25□□□□□ -1.89
CST9YLR394W KEL3Q08979 651 aaPredicted RBP3.25□□□□□ -1.89
CST9YLR394W CFT2Q12102 859 aaPredicted RBP3.25□□□□□ -1.89
CST9YLR394W NUP170P38181 1502 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms