RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C YGL138CP53122 345 aa2.27□□□□□ -2.05
SHE2YKL130C YGR111WP53265 400 aa2.27□□□□□ -2.05
SHE2YKL130C CAF130P53280 1122 aaPredicted RBP2.27□□□□□ -2.05
SHE2YKL130C YTP1P53584 459 aa2.27□□□□□ -2.05
SHE2YKL130C EAF7P53911 425 aaKnown RBP2.27□□□□□ -2.05
SHE2YKL130C SKO1Q02100 647 aa2.27□□□□□ -2.05
SHE2YKL130C MSC1Q03104 513 aa2.27□□□□□ -2.05
SHE2YKL130C HOT1Q03213 719 aa2.27□□□□□ -2.05
SHE2YKL130C ATG26Q06321 1198 aa2.27□□□□□ -2.05
SHE2YKL130C RSA1Q08932 381 aa2.27□□□□□ -2.05
SHE2YKL130C SPE3Q12074 293 aaKnown RBP2.27□□□□□ -2.05
SHE2YKL130C GPM3Q12326 303 aa2.27□□□□□ -2.05
SHE2YKL130C CTF3Q12748 733 aa2.27□□□□□ -2.05
SHE2YKL130C ISN1Q99312 450 aa2.27□□□□□ -2.05
SHE2YKL130C YER145C-AA0A023PYF4 145 aa2.26□□□□□ -2.05
SHE2YKL130C RHO2P06781 192 aa2.26□□□□□ -2.05
SHE2YKL130C PPH22P23595 377 aa2.26□□□□□ -2.05
SHE2YKL130C SNT1P25357 1226 aa2.26□□□□□ -2.05
SHE2YKL130C ELO2P25358 347 aa2.26□□□□□ -2.05
SHE2YKL130C KRR1P25586 316 aaPredicted RBP2.26□□□□□ -2.05
SHE2YKL130C SEC1P30619 724 aaKnown RBP2.26□□□□□ -2.05
SHE2YKL130C RAD24P32641 659 aa2.26□□□□□ -2.05
SHE2YKL130C LTV1P34078 463 aa2.26□□□□□ -2.05
SHE2YKL130C SHP1P34223 423 aa2.26□□□□□ -2.05
SHE2YKL130C MTR2P34232 184 aaKnown RBP2.26□□□□□ -2.05
SHE2YKL130C SWH1P35845 1188 aa2.26□□□□□ -2.05
SHE2YKL130C YKL023WP36103 277 aaKnown RBP2.26□□□□□ -2.05
SHE2YKL130C EFM2P38347 419 aa2.26□□□□□ -2.05
SHE2YKL130C UBA4P38820 440 aa2.26□□□□□ -2.05
SHE2YKL130C YJL070CP40361 888 aa2.26□□□□□ -2.05
SHE2YKL130C VMA13P41807 478 aaKnown RBP2.26□□□□□ -2.05
SHE2YKL130C RPS10BP46784 105 aaKnown RBP2.26□□□□□ -2.05
SHE2YKL130C ATG27P46989 271 aa2.26□□□□□ -2.05
SHE2YKL130C COS5P47187 383 aa2.26□□□□□ -2.05
SHE2YKL130C YGR149WP48236 432 aa2.26□□□□□ -2.05
SHE2YKL130C BTN2P53286 410 aa2.26□□□□□ -2.05
SHE2YKL130C EOS1P53938 366 aa2.26□□□□□ -2.05
SHE2YKL130C ASI1P54074 624 aa2.26□□□□□ -2.05
SHE2YKL130C MEH1Q02205 184 aa2.26□□□□□ -2.05
SHE2YKL130C YMR160WQ03823 816 aa2.26□□□□□ -2.05
SHE2YKL130C TAP42Q04372 366 aa2.26□□□□□ -2.05
SHE2YKL130C ARP10Q04549 284 aa2.26□□□□□ -2.05
SHE2YKL130C COQ9Q05779 260 aa2.26□□□□□ -2.05
SHE2YKL130C COS7Q07788 383 aa2.26□□□□□ -2.05
SHE2YKL130C DCI1Q08558 271 aa2.26□□□□□ -2.05
SHE2YKL130C RPS10AQ08745 105 aaPredicted RBP2.26□□□□□ -2.05
SHE2YKL130C SMF3Q12078 473 aaPredicted RBP2.26□□□□□ -2.05
SHE2YKL130C MED2Q12124 431 aa2.26□□□□□ -2.05
SHE2YKL130C HSP42Q12329 375 aa2.26□□□□□ -2.05
SHE2YKL130C RAV1P47104 1357 aa2.25□□□□□ -2.05
SHE2YKL130C GPH1P06738 902 aaKnown RBP2.25□□□□□ -2.05
SHE2YKL130C HIP1P06775 603 aa2.25□□□□□ -2.05
SHE2YKL130C COR1P07256 457 aa2.25□□□□□ -2.05
SHE2YKL130C SNF3P10870 884 aa2.25□□□□□ -2.05
SHE2YKL130C TPM1P17536 199 aaKnown RBP2.25□□□□□ -2.05
SHE2YKL130C RPB8P20436 146 aa2.25□□□□□ -2.05
SHE2YKL130C RRP7P25368 297 aaPredicted RBP2.25□□□□□ -2.05
SHE2YKL130C SPB1P25582 841 aaPredicted RBP2.25□□□□□ -2.05
SHE2YKL130C PRO3P32263 286 aaKnown RBP2.25□□□□□ -2.05
SHE2YKL130C AFG1P32317 509 aa2.25□□□□□ -2.05
SHE2YKL130C DPH2P32461 534 aa2.25□□□□□ -2.05
SHE2YKL130C STV1P37296 890 aa2.25□□□□□ -2.05
SHE2YKL130C ROT2P38138 954 aa2.25□□□□□ -2.05
SHE2YKL130C SLM4P38247 162 aa2.25□□□□□ -2.05
SHE2YKL130C RRT2P38332 387 aa2.25□□□□□ -2.05
SHE2YKL130C YHR054CP38780 354 aa2.25□□□□□ -2.05
SHE2YKL130C YHR210CP38893 341 aa2.25□□□□□ -2.05
SHE2YKL130C MBB1P39534 108 aa2.25□□□□□ -2.05
SHE2YKL130C SNG1P46950 547 aa2.25□□□□□ -2.05
SHE2YKL130C AIM22P47051 409 aa2.25□□□□□ -2.05
SHE2YKL130C PYK2P52489 506 aaKnown RBP2.25□□□□□ -2.05
SHE2YKL130C RMD9P53140 646 aaKnown RBP2.25□□□□□ -2.05
SHE2YKL130C RPT4P53549 437 aaKnown RBP2.25□□□□□ -2.05
SHE2YKL130C DUG3P53871 357 aa2.25□□□□□ -2.05
SHE2YKL130C HEF3P53978 1044 aaKnown RBP2.25□□□□□ -2.05
SHE2YKL130C YVH1Q02256 364 aaKnown RBP2.25□□□□□ -2.05
SHE2YKL130C ADE13Q05911 482 aaKnown RBP2.25□□□□□ -2.05
SHE2YKL130C MCP2Q06567 569 aa2.25□□□□□ -2.05
SHE2YKL130C YDL057WQ07379 328 aa2.25□□□□□ -2.05
SHE2YKL130C THP1Q08231 455 aa2.25□□□□□ -2.05
SHE2YKL130C PGC1Q08959 321 aa2.25□□□□□ -2.05
SHE2YKL130C VPS54Q12071 889 aa2.25□□□□□ -2.05
SHE2YKL130C CFT2Q12102 859 aaPredicted RBP2.25□□□□□ -2.05
SHE2YKL130C RPN5Q12250 445 aaKnown RBP2.25□□□□□ -2.05
SHE2YKL130C SKS1Q12505 502 aa2.25□□□□□ -2.05
SHE2YKL130C CYB2P00175 591 aa2.24□□□□□ -2.05
SHE2YKL130C PEP4P07267 405 aaKnown RBP2.24□□□□□ -2.05
SHE2YKL130C PEP5P12868 1029 aa2.24□□□□□ -2.05
SHE2YKL130C YIM1P28625 365 aa2.24□□□□□ -2.05
SHE2YKL130C BRF1P29056 596 aa2.24□□□□□ -2.05
SHE2YKL130C SNC1P31109 117 aa2.24□□□□□ -2.05
SHE2YKL130C GYP6P32806 458 aa2.24□□□□□ -2.05
SHE2YKL130C ARA1P38115 344 aa2.24□□□□□ -2.05
SHE2YKL130C BNA4P38169 460 aa2.24□□□□□ -2.05
SHE2YKL130C GDT1P38301 280 aaPredicted RBP2.24□□□□□ -2.05
SHE2YKL130C ARP1P38696 384 aa2.24□□□□□ -2.05
SHE2YKL130C LAG1P38703 411 aa2.24□□□□□ -2.05
SHE2YKL130C YIL060WP40519 144 aa2.24□□□□□ -2.05
SHE2YKL130C YGL108CP53139 140 aa2.24□□□□□ -2.05
SHE2YKL130C SMM1P53720 384 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms