RNA–Protein interactions for RNA: YKL080W

VMA5, Transcript of Subunit C of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA5, Length 1,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA5YKL080W CDC23P16522 626 aa3.23□□□□□ -1.89
VMA5YKL080W EST1P17214 699 aaPredicted RBP3.23□□□□□ -1.89
VMA5YKL080W PUP3P25451 205 aaKnown RBP3.23□□□□□ -1.89
VMA5YKL080W MSP1P28737 362 aa3.23□□□□□ -1.89
VMA5YKL080W SEC1P30619 724 aaKnown RBP3.23□□□□□ -1.89
VMA5YKL080W SMI1P32566 505 aa3.23□□□□□ -1.89
VMA5YKL080W YEL043WP32618 956 aa3.23□□□□□ -1.89
VMA5YKL080W YME1P32795 747 aa3.23□□□□□ -1.89
VMA5YKL080W GYP6P32806 458 aa3.23□□□□□ -1.89
VMA5YKL080W WSS1P38838 269 aa3.23□□□□□ -1.89
VMA5YKL080W CIN4P39110 191 aa3.23□□□□□ -1.89
VMA5YKL080W TIF4631P39935 952 aaKnown RBP3.23□□□□□ -1.89
VMA5YKL080W YIL060WP40519 144 aa3.23□□□□□ -1.89
VMA5YKL080W COS5P47187 383 aa3.23□□□□□ -1.89
VMA5YKL080W LYS4P49367 693 aaPredicted RBP3.23□□□□□ -1.89
VMA5YKL080W APT1P49435 187 aaKnown RBP3.23□□□□□ -1.89
VMA5YKL080W YGL138CP53122 345 aa3.23□□□□□ -1.89
VMA5YKL080W RPA49Q01080 415 aaPredicted RBP3.23□□□□□ -1.89
VMA5YKL080W YPL107WQ02873 248 aa3.23□□□□□ -1.89
VMA5YKL080W CTL1Q03220 320 aaKnown RBP3.23□□□□□ -1.89
VMA5YKL080W DPB4Q04603 196 aaKnown RBP3.23□□□□□ -1.89
VMA5YKL080W SCW10Q04951 389 aa3.23□□□□□ -1.89
VMA5YKL080W COS7Q07788 383 aa3.23□□□□□ -1.89
VMA5YKL080W YOL159CQ08300 171 aa3.23□□□□□ -1.89
VMA5YKL080W AEP3Q12089 606 aa3.23□□□□□ -1.89
VMA5YKL080W RPN5Q12250 445 aaKnown RBP3.23□□□□□ -1.89
VMA5YKL080W CSR2Q12734 1121 aa3.23□□□□□ -1.89
VMA5YKL080W HIP1P06775 603 aa3.22□□□□□ -1.89
VMA5YKL080W SPS4P09937 338 aa3.22□□□□□ -1.89
VMA5YKL080W RPL1AP0CX43 217 aaKnown RBP3.22□□□□□ -1.89
VMA5YKL080W RPL1BP0CX44 217 aaKnown RBP3.22□□□□□ -1.89
VMA5YKL080W DAL80P26343 269 aa3.22□□□□□ -1.89
VMA5YKL080W BUD14P27637 709 aa3.22□□□□□ -1.89
VMA5YKL080W IDH2P28241 369 aaKnown RBP3.22□□□□□ -1.89
VMA5YKL080W RAD14P28519 371 aa3.22□□□□□ -1.89
VMA5YKL080W DPH2P32461 534 aa3.22□□□□□ -1.89
VMA5YKL080W MSR1P38714 643 aa3.22□□□□□ -1.89
VMA5YKL080W PES4P39684 611 aa3.22□□□□□ -1.89
VMA5YKL080W PCL7P40186 285 aa3.22□□□□□ -1.89
VMA5YKL080W RTS2P40962 232 aa3.22□□□□□ -1.89
VMA5YKL080W AZF1P41696 914 aa3.22□□□□□ -1.89
VMA5YKL080W ALK1P43633 760 aaKnown RBP3.22□□□□□ -1.89
VMA5YKL080W YGR149WP48236 432 aa3.22□□□□□ -1.89
VMA5YKL080W ERG26P53199 349 aaKnown RBP3.22□□□□□ -1.89
VMA5YKL080W HST1P53685 503 aa3.22□□□□□ -1.89
VMA5YKL080W TOF1P53840 1238 aa3.22□□□□□ -1.89
VMA5YKL080W NCS2P53923 493 aaPredicted RBP3.22□□□□□ -1.89
VMA5YKL080W ARP5P53946 755 aa3.22□□□□□ -1.89
VMA5YKL080W YMR178WQ03219 274 aaKnown RBP3.22□□□□□ -1.89
VMA5YKL080W YMR111CQ04461 462 aaPredicted RBP3.22□□□□□ -1.89
VMA5YKL080W RRP9Q06506 573 aaKnown RBP3.22□□□□□ -1.89
VMA5YKL080W FMP45Q07651 309 aa3.22□□□□□ -1.89
VMA5YKL080W REX3Q12090 404 aa3.22□□□□□ -1.89
VMA5YKL080W RTC5Q12108 567 aaKnown RBP3.22□□□□□ -1.89
VMA5YKL080W NFI1Q12216 726 aa3.22□□□□□ -1.89
VMA5YKL080W YDL007C-AQ2V2Q0 85 aa3.22□□□□□ -1.89
VMA5YKL080W YIL002W-AQ3E7Z5 69 aa3.22□□□□□ -1.89
VMA5YKL080W YLR278CQ05854 1341 aa3.21□□□□□ -1.89
VMA5YKL080W GPH1P06738 902 aaKnown RBP3.21□□□□□ -1.9
VMA5YKL080W RHO2P06781 192 aa3.21□□□□□ -1.9
VMA5YKL080W GLK1P17709 500 aaKnown RBP3.21□□□□□ -1.9
VMA5YKL080W BUD5P25300 642 aaPredicted RBP3.21□□□□□ -1.9
VMA5YKL080W IMG1P25626 169 aa3.21□□□□□ -1.9
VMA5YKL080W ERV1P27882 189 aa3.21□□□□□ -1.9
VMA5YKL080W SSE1P32589 693 aaKnown RBP3.21□□□□□ -1.9
VMA5YKL080W RML2P32611 393 aa3.21□□□□□ -1.9
VMA5YKL080W HEL1P36113 551 aa3.21□□□□□ -1.9
VMA5YKL080W ELO1P39540 310 aa3.21□□□□□ -1.9
VMA5YKL080W MEP1P40260 492 aa3.21□□□□□ -1.9
VMA5YKL080W VMA13P41807 478 aaKnown RBP3.21□□□□□ -1.9
VMA5YKL080W IMD4P50094 524 aaKnown RBP3.21□□□□□ -1.9
VMA5YKL080W LCL3P53153 274 aa3.21□□□□□ -1.9
VMA5YKL080W CRZ1P53968 678 aa3.21□□□□□ -1.9
VMA5YKL080W RPN9Q04062 393 aaKnown RBP3.21□□□□□ -1.9
VMA5YKL080W PPM1Q04081 328 aa3.21□□□□□ -1.9
VMA5YKL080W PDS5Q04264 1277 aa3.21□□□□□ -1.9
VMA5YKL080W YFH1Q07540 174 aa3.21□□□□□ -1.9
VMA5YKL080W VPS54Q12071 889 aa3.21□□□□□ -1.9
VMA5YKL080W RLM1Q12224 676 aa3.21□□□□□ -1.9
VMA5YKL080W YDR061WQ12298 539 aa3.21□□□□□ -1.9
VMA5YKL080W RPC40P07703 335 aaKnown RBP3.2□□□□□ -1.9
VMA5YKL080W RPL31BP0C2H9 113 aaKnown RBP3.2□□□□□ -1.9
VMA5YKL080W RPL3P14126 387 aaKnown RBP3.2□□□□□ -1.9
VMA5YKL080W KRS1P15180 591 aaKnown RBP3.2□□□□□ -1.9
VMA5YKL080W SPO7P18410 259 aa3.2□□□□□ -1.9
VMA5YKL080W CLB2P24869 491 aa3.2□□□□□ -1.9
VMA5YKL080W SNT1P25357 1226 aa3.2□□□□□ -1.9
VMA5YKL080W POT1P27796 417 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
VMA5YKL080W REC114P32841 428 aa3.2□□□□□ -1.9
VMA5YKL080W TIF3P34167 436 aaKnown RBP3.2□□□□□ -1.9
VMA5YKL080W SLM4P38247 162 aa3.2□□□□□ -1.9
VMA5YKL080W RRT2P38332 387 aa3.2□□□□□ -1.9
VMA5YKL080W TSC10P38342 320 aa3.2□□□□□ -1.9
VMA5YKL080W YIL089WP40500 205 aa3.2□□□□□ -1.9
VMA5YKL080W SGN1P40561 250 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
VMA5YKL080W IAH1P41734 238 aa3.2□□□□□ -1.9
VMA5YKL080W RPS7BP48164 190 aaKnown RBP3.2□□□□□ -1.9
VMA5YKL080W IPI3P53877 555 aa3.2□□□□□ -1.9
VMA5YKL080W TOF2Q02208 771 aa3.2□□□□□ -1.9
VMA5YKL080W ARX1Q03862 593 aaKnown RBP3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms