RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C ARA1P38115 344 aa3.48□□□□□ -1.85
SSM4YIL030C YBL028CP38202 106 aa3.48□□□□□ -1.85
SSM4YIL030C MUM2P38236 366 aa3.48□□□□□ -1.85
SSM4YIL030C GIP4P39732 760 aa3.48□□□□□ -1.85
SSM4YIL030C RPN3P40016 523 aaKnown RBP3.48□□□□□ -1.85
SSM4YIL030C FIR1P40020 876 aa3.48□□□□□ -1.85
SSM4YIL030C MDV1P47025 714 aa3.48□□□□□ -1.85
SSM4YIL030C YJL043WP47053 257 aa3.48□□□□□ -1.85
SSM4YIL030C MTO1P53070 669 aa3.48□□□□□ -1.85
SSM4YIL030C REG1Q00816 1014 aa3.48□□□□□ -1.85
SSM4YIL030C NOG1Q02892 647 aaKnown RBP3.48□□□□□ -1.85
SSM4YIL030C UGO1Q03327 502 aa3.48□□□□□ -1.85
SSM4YIL030C TRM82Q03774 444 aa3.48□□□□□ -1.85
SSM4YIL030C ARP10Q04549 284 aa3.48□□□□□ -1.85
SSM4YIL030C OXR1Q08952 273 aa3.48□□□□□ -1.85
SSM4YIL030C YPL199CQ08954 240 aa3.48□□□□□ -1.85
SSM4YIL030C ALG7P07286 448 aa3.48□□□□□ -1.85
SSM4YIL030C SSA1P10591 642 aaKnown RBP3.48□□□□□ -1.85
SSM4YIL030C EMP24P32803 203 aaKnown RBP3.48□□□□□ -1.85
SSM4YIL030C LOT5P34234 306 aa3.48□□□□□ -1.85
SSM4YIL030C MTC2P34246 357 aa3.48□□□□□ -1.85
SSM4YIL030C UIP5P36137 443 aa3.48□□□□□ -1.85
SSM4YIL030C VRG4P40107 337 aa3.48□□□□□ -1.85
SSM4YIL030C NIT1P40447 199 aa3.48□□□□□ -1.85
SSM4YIL030C SNM1P40993 198 aa3.48□□□□□ -1.85
SSM4YIL030C MNN5P46982 586 aa3.48□□□□□ -1.85
SSM4YIL030C RAI1P53063 387 aaKnown RBP3.48□□□□□ -1.85
SSM4YIL030C NUP100Q02629 959 aa3.48□□□□□ -1.85
SSM4YIL030C IRC15Q02733 499 aa3.48□□□□□ -1.85
SSM4YIL030C MSC2Q03455 724 aa3.48□□□□□ -1.85
SSM4YIL030C RAD33Q04231 177 aa3.48□□□□□ -1.85
SSM4YIL030C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
SSM4YIL030C SMF3Q12078 473 aaPredicted RBP3.48□□□□□ -1.85
SSM4YIL030C FMP16Q12497 93 aa3.48□□□□□ -1.85
SSM4YIL030C LAG2Q92325 660 aa3.48□□□□□ -1.85
SSM4YIL030C PHO5P00635 467 aa3.47□□□□□ -1.85
SSM4YIL030C PHO4P07270 312 aaKnown RBP3.47□□□□□ -1.85
SSM4YIL030C COS2P0CX12 379 aa3.47□□□□□ -1.85
SSM4YIL030C COS3P0CX13 379 aa3.47□□□□□ -1.85
SSM4YIL030C IDI1P15496 288 aa3.47□□□□□ -1.85
SSM4YIL030C PRP2P20095 876 aaPredicted RBP3.47□□□□□ -1.85
SSM4YIL030C PHO84P25297 587 aaKnown RBP3.47□□□□□ -1.85
SSM4YIL030C RPC19P28000 142 aaKnown RBP3.47□□□□□ -1.85
SSM4YIL030C AVT5P38176 459 aa3.47□□□□□ -1.85
SSM4YIL030C UBX7P38349 436 aa3.47□□□□□ -1.85
SSM4YIL030C RIM4P38741 713 aa3.47□□□□□ -1.85
SSM4YIL030C UBA4P38820 440 aa3.47□□□□□ -1.85
SSM4YIL030C ACA1P39970 489 aa3.47□□□□□ -1.85
SSM4YIL030C AVT2P39981 480 aa3.47□□□□□ -1.85
SSM4YIL030C HXT9P40885 567 aa3.47□□□□□ -1.85
SSM4YIL030C LSG1P53145 640 aaKnown RBP3.47□□□□□ -1.85
SSM4YIL030C HXT11P54862 567 aa3.47□□□□□ -1.85
SSM4YIL030C RMI1Q02685 241 aa3.47□□□□□ -1.85
SSM4YIL030C PLP1Q04004 230 aa3.47□□□□□ -1.85
SSM4YIL030C THP1Q08231 455 aa3.47□□□□□ -1.85
SSM4YIL030C RRG7Q08774 242 aaPredicted RBP3.47□□□□□ -1.85
SSM4YIL030C SFG1Q12507 346 aa3.47□□□□□ -1.85
SSM4YIL030C PKC1P24583 1151 aa3.47□□□□□ -1.85
SSM4YIL030C TFB1P32776 642 aa3.47□□□□□ -1.85
SSM4YIL030C RRN6P32786 894 aa3.47□□□□□ -1.85
SSM4YIL030C CLB6P32943 380 aa3.47□□□□□ -1.85
SSM4YIL030C MSN2P33748 704 aa3.47□□□□□ -1.85
SSM4YIL030C PRM2P40534 656 aa3.47□□□□□ -1.85
SSM4YIL030C CHA4P43634 648 aa3.47□□□□□ -1.85
SSM4YIL030C YJR098CP47139 656 aa3.47□□□□□ -1.85
SSM4YIL030C TIS11P47977 285 aa3.47□□□□□ -1.85
SSM4YIL030C SCS3P53012 380 aa3.47□□□□□ -1.85
SSM4YIL030C YGR016WP53209 190 aa3.47□□□□□ -1.85
SSM4YIL030C POP6P53218 158 aa3.47□□□□□ -1.85
SSM4YIL030C GPI1P53306 609 aa3.47□□□□□ -1.85
SSM4YIL030C RSF1Q05043 376 aa3.47□□□□□ -1.85
SSM4YIL030C TPO3Q06451 622 aa3.47□□□□□ -1.85
SSM4YIL030C IRC10Q08118 586 aa3.47□□□□□ -1.85
SSM4YIL030C YPR022CQ12139 1133 aa3.47□□□□□ -1.85
SSM4YIL030C YBL113CQ7M4S9 792 aa3.47□□□□□ -1.85
SSM4YIL030C COX9P07255 59 aa3.47□□□□□ -1.85
SSM4YIL030C LEU1P07264 779 aaKnown RBP3.47□□□□□ -1.85
SSM4YIL030C CTS1P29029 562 aa3.47□□□□□ -1.85
SSM4YIL030C YCK3P39962 524 aa3.47□□□□□ -1.85
SSM4YIL030C YJR107WP47145 328 aa3.47□□□□□ -1.85
SSM4YIL030C HMS2P47175 358 aa3.47□□□□□ -1.85
SSM4YIL030C ENT5Q03769 411 aaKnown RBP3.47□□□□□ -1.85
SSM4YIL030C TRM12Q04235 462 aa3.47□□□□□ -1.85
SSM4YIL030C GAS2Q06135 555 aa3.47□□□□□ -1.85
SSM4YIL030C GRC3Q07845 632 aa3.47□□□□□ -1.85
SSM4YIL030C YLR049CQ12110 428 aa3.47□□□□□ -1.85
SSM4YIL030C YDR061WQ12298 539 aa3.47□□□□□ -1.85
SSM4YIL030C FRE6Q12473 712 aa3.47□□□□□ -1.85
SSM4YIL030C YLR358CO13565 187 aa3.46□□□□□ -1.85
SSM4YIL030C ARG3P05150 338 aa3.46□□□□□ -1.85
SSM4YIL030C GPH1P06738 902 aaKnown RBP3.46□□□□□ -1.85
SSM4YIL030C MSS1P32559 526 aaPredicted RBP3.46□□□□□ -1.85
SSM4YIL030C SNU114P36048 1008 aaKnown RBP3.46□□□□□ -1.85
SSM4YIL030C MAK5P38112 773 aaPredicted RBP3.46□□□□□ -1.85
SSM4YIL030C KTR4P38131 464 aa3.46□□□□□ -1.85
SSM4YIL030C GGC1P38988 300 aa3.46□□□□□ -1.85
SSM4YIL030C BOL3P39724 118 aa3.46□□□□□ -1.85
SSM4YIL030C CNN1P43618 361 aa3.46□□□□□ -1.85
SSM4YIL030C IMP4P53941 290 aaKnown RBP3.46□□□□□ -1.85
SSM4YIL030C MSS11Q03825 758 aa3.46□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms