RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W YML002WP0CF17 737 aa6.25□□□□□ -1.41
MSP1YGR028W PHO3P24031 467 aa6.25□□□□□ -1.41
MSP1YGR028W KAR4P25583 335 aa6.25□□□□□ -1.41
MSP1YGR028W URA7P28274 579 aaKnown RBP6.25□□□□□ -1.41
MSP1YGR028W TPS2P31688 896 aaKnown RBP6.25□□□□□ -1.41
MSP1YGR028W ATP11P32453 318 aa6.25□□□□□ -1.41
MSP1YGR028W DEF1P35732 738 aaKnown RBP6.25□□□□□ -1.41
MSP1YGR028W YJL107CP42947 387 aa6.25□□□□□ -1.41
MSP1YGR028W ALK1P43633 760 aaKnown RBP6.25□□□□□ -1.41
MSP1YGR028W ARE2P53629 642 aaKnown RBP6.25□□□□□ -1.41
MSP1YGR028W YOL073CQ08232 322 aa6.25□□□□□ -1.41
MSP1YGR028W YDR061WQ12298 539 aa6.25□□□□□ -1.41
MSP1YGR028W YDR262WQ12331 272 aa6.25□□□□□ -1.41
MSP1YGR028W RPB2P08518 1224 aaKnown RBP6.24□□□□□ -1.41
MSP1YGR028W MSH1P25846 959 aa6.24□□□□□ -1.41
MSP1YGR028W PET309P32522 965 aaPredicted RBP6.24□□□□□ -1.41
MSP1YGR028W YHI9P38765 294 aa6.24□□□□□ -1.41
MSP1YGR028W YHR182WP38870 785 aa6.24□□□□□ -1.41
MSP1YGR028W LYS1P38998 373 aaRIP-Chip data6.24□□□□□ -1.41not detected
MSP1YGR028W YNL320WP42840 284 aa6.24□□□□□ -1.41
MSP1YGR028W SGF73P53165 657 aa6.24□□□□□ -1.41
MSP1YGR028W PEX8P53248 589 aa6.24□□□□□ -1.41
MSP1YGR028W TFB2Q02939 513 aa6.24□□□□□ -1.41
MSP1YGR028W CCE1Q03702 353 aa6.24□□□□□ -1.41
MSP1YGR028W CTK1Q03957 528 aaKnown RBP6.24□□□□□ -1.41
MSP1YGR028W VTI1Q04338 217 aa6.24□□□□□ -1.41
MSP1YGR028W BLS1Q06071 122 aa6.24□□□□□ -1.41
MSP1YGR028W CUE5Q08412 411 aaKnown RBP6.24□□□□□ -1.41
MSP1YGR028W SWM1Q12379 170 aa6.24□□□□□ -1.41
MSP1YGR028W RAD1P06777 1100 aa6.23□□□□□ -1.41
MSP1YGR028W SPO16P17122 198 aa6.23□□□□□ -1.41
MSP1YGR028W ATP12P22135 325 aa6.23□□□□□ -1.41
MSP1YGR028W GCG1P32656 232 aaKnown RBP6.23□□□□□ -1.41
MSP1YGR028W RRP1P35178 278 aaPredicted RBP6.23□□□□□ -1.41
MSP1YGR028W TOM20P35180 183 aa6.23□□□□□ -1.41
MSP1YGR028W CCT4P39078 528 aaKnown RBP6.23□□□□□ -1.41
MSP1YGR028W GIM4P40005 111 aaKnown RBP6.23□□□□□ -1.41
MSP1YGR028W LRO1P40345 661 aa6.23□□□□□ -1.41
MSP1YGR028W UTP18P40362 594 aaPredicted RBP6.23□□□□□ -1.41
MSP1YGR028W ZRG17P53735 605 aa6.23□□□□□ -1.41
MSP1YGR028W COG6P53959 839 aa6.23□□□□□ -1.41
MSP1YGR028W AAT1Q01802 451 aa6.23□□□□□ -1.41
MSP1YGR028W YDR109CQ04585 715 aa6.23□□□□□ -1.41
MSP1YGR028W BSC6Q08280 497 aa6.23□□□□□ -1.41
MSP1YGR028W NUS1Q12063 375 aa6.23□□□□□ -1.41
MSP1YGR028W GTT2Q12390 233 aa6.23□□□□□ -1.41
MSP1YGR028W UBR1P19812 1950 aa6.23□□□□□ -1.41
MSP1YGR028W HFA1P32874 2273 aa6.23□□□□□ -1.41
MSP1YGR028W STE2D6VTK4 431 aa6.22□□□□□ -1.41
MSP1YGR028W PHO5P00635 467 aa6.22□□□□□ -1.41
MSP1YGR028W HOP1P20050 605 aa6.22□□□□□ -1.41
MSP1YGR028W NGG1P32494 702 aa6.22□□□□□ -1.41
MSP1YGR028W CDC13P32797 924 aaKnown RBP6.22□□□□□ -1.41
MSP1YGR028W UBC6P33296 250 aaPredicted RBP6.22□□□□□ -1.41
MSP1YGR028W TIP20P33891 701 aa6.22□□□□□ -1.41
MSP1YGR028W NTR2P36118 322 aaPredicted RBP6.22□□□□□ -1.41
MSP1YGR028W RPF2P36160 344 aaKnown RBP6.22□□□□□ -1.41
MSP1YGR028W MRPL37P36532 105 aa6.22□□□□□ -1.41
MSP1YGR028W YSW1P38280 609 aa6.22□□□□□ -1.41
MSP1YGR028W TRM12Q04235 462 aa6.22□□□□□ -1.41
MSP1YGR028W ADE13Q05911 482 aaKnown RBP6.22□□□□□ -1.41
MSP1YGR028W MRH1Q12117 320 aaPredicted RBP6.22□□□□□ -1.41
MSP1YGR028W SEC39Q12745 709 aa6.22□□□□□ -1.41
MSP1YGR028W RRP12Q12754 1228 aaKnown RBP6.22□□□□□ -1.41
MSP1YGR028W HRP1Q99383 534 aaKnown RBP6.22□□□□□ -1.41
MSP1YGR028W MF(ALPHA)2P32435 120 aa6.21□□□□□ -1.42
MSP1YGR028W MEI5P32489 222 aa6.21□□□□□ -1.42
MSP1YGR028W SKN1P33336 771 aa6.21□□□□□ -1.42
MSP1YGR028W UBA4P38820 440 aa6.21□□□□□ -1.42
MSP1YGR028W PFA3P42836 336 aa6.21□□□□□ -1.42
MSP1YGR028W GAT1P43574 510 aa6.21□□□□□ -1.42
MSP1YGR028W RHO3Q00245 231 aaKnown RBP6.21□□□□□ -1.42
MSP1YGR028W UGO1Q03327 502 aa6.21□□□□□ -1.42
MSP1YGR028W CDC123Q05791 360 aa6.21□□□□□ -1.42
MSP1YGR028W DIC1Q06143 298 aa6.21□□□□□ -1.42
MSP1YGR028W CRN1Q06440 651 aa6.21□□□□□ -1.42
MSP1YGR028W MDM12Q92328 271 aa6.21□□□□□ -1.42
MSP1YGR028W BRR2P32639 2163 aaKnown RBP6.21□□□□□ -1.42
MSP1YGR028W YBR056W-AI2HB52 66 aa6.2□□□□□ -1.42
MSP1YGR028W YCR006CP25350 157 aa6.2□□□□□ -1.42
MSP1YGR028W THI4P32318 326 aa6.2□□□□□ -1.42
MSP1YGR028W HOG1P32485 435 aa6.2□□□□□ -1.42
MSP1YGR028W TRM7P38238 310 aaKnown RBP6.2□□□□□ -1.42
MSP1YGR028W YHR033WP38690 423 aa6.2□□□□□ -1.42
MSP1YGR028W EFM1P38732 585 aa6.2□□□□□ -1.42
MSP1YGR028W RLP7P40693 322 aaKnown RBP6.2□□□□□ -1.42
MSP1YGR028W SPG5P42933 373 aa6.2□□□□□ -1.42
MSP1YGR028W SAE2P46946 345 aa6.2□□□□□ -1.42
MSP1YGR028W PHO23P50947 330 aa6.2□□□□□ -1.42
MSP1YGR028W MAL11P53048 616 aa6.2□□□□□ -1.42
MSP1YGR028W VHS1Q03785 461 aa6.2□□□□□ -1.42
MSP1YGR028W YDR056CQ12025 205 aa6.2□□□□□ -1.42
MSP1YGR028W HAL9Q12180 1030 aa6.2□□□□□ -1.42
MSP1YGR028W YOR012WQ12351 137 aa6.2□□□□□ -1.42
MSP1YGR028W PST1Q12355 444 aa6.2□□□□□ -1.42
MSP1YGR028W ICT1Q12385 394 aa6.2□□□□□ -1.42
MSP1YGR028W DIF1O13577 133 aa6.19□□□□□ -1.42
MSP1YGR028W CDC21P06785 304 aa6.19□□□□□ -1.42
MSP1YGR028W SEC53P07283 254 aaKnown RBP6.19□□□□□ -1.42
MSP1YGR028W TRP4P07285 380 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms