RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C IRC15Q02733 499 aa2.44□□□□□ -2.02
SMB1YER029C VPS74Q06385 345 aa2.44□□□□□ -2.02
SMB1YER029C HNT3Q08702 217 aa2.44□□□□□ -2.02
SMB1YER029C RCN2Q12044 265 aa2.44□□□□□ -2.02
SMB1YER029C CBS1P14066 229 aa2.43□□□□□ -2.02
SMB1YER029C HSC82P15108 705 aaKnown RBP2.43□□□□□ -2.02
SMB1YER029C IMP2'P32351 346 aa2.43□□□□□ -2.02
SMB1YER029C MRE11P32829 692 aa2.43□□□□□ -2.02
SMB1YER029C SWH1P35845 1188 aa2.43□□□□□ -2.02
SMB1YER029C NOP4P37838 685 aaKnown RBP2.43□□□□□ -2.02
SMB1YER029C SRO77P38163 1010 aa2.43□□□□□ -2.02
SMB1YER029C FAU1P40099 211 aa2.43□□□□□ -2.02
SMB1YER029C RRT5P43607 289 aa2.43□□□□□ -2.02
SMB1YER029C YGR066CP53242 292 aa2.43□□□□□ -2.02
SMB1YER029C ZPR1P53303 486 aaKnown RBP2.43□□□□□ -2.02
SMB1YER029C AVL9Q12500 764 aa2.43□□□□□ -2.02
SMB1YER029C MES1P00958 751 aaKnown RBP2.42□□□□□ -2.02
SMB1YER029C GAL80P04387 435 aa2.42□□□□□ -2.02
SMB1YER029C DFR1P07807 211 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
SMB1YER029C MFT1P33441 392 aaKnown RBP2.42□□□□□ -2.02
SMB1YER029C ERP2P39704 215 aa2.42□□□□□ -2.02
SMB1YER029C SYG1P40528 902 aa2.42□□□□□ -2.02
SMB1YER029C PET130P47065 347 aa2.42□□□□□ -2.02
SMB1YER029C TAP42Q04372 366 aa2.42□□□□□ -2.02
SMB1YER029C VPS38Q05919 439 aa2.42□□□□□ -2.02
SMB1YER029C ERV2Q12284 196 aa2.42□□□□□ -2.02
SMB1YER029C YDL007C-AQ2V2Q0 85 aa2.42□□□□□ -2.02
SMB1YER029C RAV1P47104 1357 aa2.41□□□□□ -2.02
SMB1YER029C CHS1P08004 1131 aa2.41□□□□□ -2.02
SMB1YER029C LPD1P09624 499 aaKnown RBP2.41□□□□□ -2.02
SMB1YER029C REV1P12689 985 aa2.41□□□□□ -2.02
SMB1YER029C EXO70P19658 623 aa2.41□□□□□ -2.02
SMB1YER029C BUB3P26449 341 aa2.41□□□□□ -2.02
SMB1YER029C PAP1P29468 568 aaKnown RBP2.41□□□□□ -2.02
SMB1YER029C REG2P38232 338 aa2.41□□□□□ -2.02
SMB1YER029C YBR225WP38321 900 aa2.41□□□□□ -2.02
SMB1YER029C MBB1P39534 108 aa2.41□□□□□ -2.02
SMB1YER029C VMA13P41807 478 aaKnown RBP2.41□□□□□ -2.02
SMB1YER029C ART5P53244 586 aaKnown RBP2.41□□□□□ -2.02
SMB1YER029C KTR5P53966 522 aaPredicted RBP2.41□□□□□ -2.02
SMB1YER029C TIM10P87108 93 aa2.41□□□□□ -2.02
SMB1YER029C ENT1Q12518 454 aa2.41□□□□□ -2.02
SMB1YER029C GCN4P03069 281 aa2.4□□□□□ -2.03
SMB1YER029C HIP1P06775 603 aa2.4□□□□□ -2.03
SMB1YER029C FUN19P28003 413 aaPredicted RBP2.4□□□□□ -2.03
SMB1YER029C YIM1P28625 365 aa2.4□□□□□ -2.03
SMB1YER029C ELP2P42935 788 aa2.4□□□□□ -2.03
SMB1YER029C AVT4P50944 713 aa2.4□□□□□ -2.03
SMB1YER029C MRD1Q06106 887 aaKnown RBP2.4□□□□□ -2.03
SMB1YER029C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
SMB1YER029C SEC39Q12745 709 aa2.4□□□□□ -2.03
SMB1YER029C RRP12Q12754 1228 aaKnown RBP2.4□□□□□ -2.03
SMB1YER029C RPL31BP0C2H9 113 aaKnown RBP2.39□□□□□ -2.03
SMB1YER029C YME1P32795 747 aa2.39□□□□□ -2.03
SMB1YER029C SEC66P33754 206 aa2.39□□□□□ -2.03
SMB1YER029C YBP1P38315 674 aa2.39□□□□□ -2.03
SMB1YER029C TMA108P40462 946 aa2.39□□□□□ -2.03
SMB1YER029C YIL067CP40514 678 aa2.39□□□□□ -2.03
SMB1YER029C MKT1P40850 830 aaKnown RBP2.39□□□□□ -2.03
SMB1YER029C TRS85P46944 698 aa2.39□□□□□ -2.03
SMB1YER029C CAF130P53280 1122 aaPredicted RBP2.39□□□□□ -2.03
SMB1YER029C RBG2P53295 368 aaKnown RBP2.39□□□□□ -2.03
SMB1YER029C CPR1P14832 162 aaKnown RBP2.38□□□□□ -2.03
SMB1YER029C OCA4P25366 362 aa2.38□□□□□ -2.03
SMB1YER029C LDB16P25587 256 aa2.38□□□□□ -2.03
SMB1YER029C FRE2P36033 711 aa2.38□□□□□ -2.03
SMB1YER029C MET18P40469 1032 aa2.38□□□□□ -2.03
SMB1YER029C SPO22P40511 975 aa2.38□□□□□ -2.03
SMB1YER029C OCA1P50946 238 aaPredicted RBP2.38□□□□□ -2.03
SMB1YER029C YGL242CP53066 181 aa2.38□□□□□ -2.03
SMB1YER029C SHE10P53075 577 aa2.38□□□□□ -2.03
SMB1YER029C YGL108CP53139 140 aa2.38□□□□□ -2.03
SMB1YER029C PIR3Q03180 325 aa2.38□□□□□ -2.03
SMB1YER029C PDS5Q04264 1277 aa2.38□□□□□ -2.03
SMB1YER029C YDL121CQ07541 149 aa2.38□□□□□ -2.03
SMB1YER029C YOR387CQ08910 206 aa2.38□□□□□ -2.03
SMB1YER029C TMS1Q12116 473 aa2.38□□□□□ -2.03
SMB1YER029C RRI2Q12348 645 aa2.38□□□□□ -2.03
SMB1YER029C SPT15P13393 240 aaKnown RBP2.37□□□□□ -2.03
SMB1YER029C HEM15P16622 393 aa2.37□□□□□ -2.03
SMB1YER029C GFD2P25370 566 aaKnown RBP2.37□□□□□ -2.03
SMB1YER029C PEP3P27801 918 aa2.37□□□□□ -2.03
SMB1YER029C NAM9P27929 486 aa2.37□□□□□ -2.03
SMB1YER029C GLC7P32598 312 aaKnown RBP2.37□□□□□ -2.03
SMB1YER029C MRP4P32902 394 aa2.37□□□□□ -2.03
SMB1YER029C CST26P38226 397 aa2.37□□□□□ -2.03
SMB1YER029C DOT5P40553 215 aa2.37□□□□□ -2.03
SMB1YER029C URB2P47108 1174 aa2.37□□□□□ -2.03
SMB1YER029C OGG1P53397 376 aaPredicted RBP2.37□□□□□ -2.03
SMB1YER029C JJJ1P53863 590 aa2.37□□□□□ -2.03
SMB1YER029C MRPL35Q06678 367 aa2.37□□□□□ -2.03
SMB1YER029C THP3Q12049 470 aaKnown RBP2.37□□□□□ -2.03
SMB1YER029C BRR1Q99177 341 aaPredicted RBP2.37□□□□□ -2.03
SMB1YER029C FOB1O13329 566 aa2.36□□□□□ -2.03
SMB1YER029C NDI1P32340 513 aa2.36□□□□□ -2.03
SMB1YER029C MRPL4P36517 319 aa2.36□□□□□ -2.03
SMB1YER029C REE1P40893 198 aa2.36□□□□□ -2.03
SMB1YER029C RMD8P43620 662 aa2.36□□□□□ -2.03
SMB1YER029C TWF1P53250 332 aa2.36□□□□□ -2.03
SMB1YER029C CAF40P53829 373 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms