RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C CCT2P39076 527 aaKnown RBP0.81□□□□□ -2.28
SEC1YDR164C DSE1P40077 573 aa0.81□□□□□ -2.28
SEC1YDR164C YJL068CP40363 299 aa0.81□□□□□ -2.28
SEC1YDR164C SIM1P40472 476 aa0.81□□□□□ -2.28
SEC1YDR164C FAF1P40546 346 aaPredicted RBP0.81□□□□□ -2.28
SEC1YDR164C IST3P40565 148 aaPredicted RBP0.81□□□□□ -2.28
SEC1YDR164C TFG2P41896 400 aaPredicted RBP0.81□□□□□ -2.28
SEC1YDR164C TOS3P43637 560 aa0.81□□□□□ -2.28
SEC1YDR164C MRX6P48564 524 aa0.81□□□□□ -2.28
SEC1YDR164C FMS1P50264 508 aa0.81□□□□□ -2.28
SEC1YDR164C ASE1P50275 885 aa0.81□□□□□ -2.28
SEC1YDR164C ZPR1P53303 486 aaKnown RBP0.81□□□□□ -2.28
SEC1YDR164C BNI5P53890 448 aaKnown RBP0.81□□□□□ -2.28
SEC1YDR164C INN1P53901 409 aa0.81□□□□□ -2.28
SEC1YDR164C RPT6Q01939 405 aaKnown RBP0.81□□□□□ -2.28
SEC1YDR164C ELP3Q02908 557 aaKnown RBP0.81□□□□□ -2.28
SEC1YDR164C YMR102CQ03177 834 aa0.81□□□□□ -2.28
SEC1YDR164C YMR178WQ03219 274 aaKnown RBP0.81□□□□□ -2.28
SEC1YDR164C SPC19Q03954 165 aa0.81□□□□□ -2.28
SEC1YDR164C RAD30Q04049 632 aa0.81□□□□□ -2.28
SEC1YDR164C CSM3Q04659 317 aa0.81□□□□□ -2.28
SEC1YDR164C RCO1Q04779 684 aa0.81□□□□□ -2.28
SEC1YDR164C CRF1Q04930 467 aa0.81□□□□□ -2.28
SEC1YDR164C YDR278CQ05612 105 aa0.81□□□□□ -2.28
SEC1YDR164C VPS38Q05919 439 aa0.81□□□□□ -2.28
SEC1YDR164C PSK2Q08217 1101 aa0.81□□□□□ -2.28
SEC1YDR164C ETT1Q08421 412 aaKnown RBP0.81□□□□□ -2.28
SEC1YDR164C RRG1Q12167 365 aaPredicted RBP0.81□□□□□ -2.28
SEC1YDR164C YLL056CQ12177 298 aa0.81□□□□□ -2.28
SEC1YDR164C BUG1Q12191 341 aa0.81□□□□□ -2.28
SEC1YDR164C SCM3Q12334 223 aa0.81□□□□□ -2.28
SEC1YDR164C SMC6Q12749 1114 aa0.81□□□□□ -2.28
SEC1YDR164C YBR126W-AQ8TGU7 68 aa0.81□□□□□ -2.28
SEC1YDR164C YRF1-1P0CX20 1796 aa0.81□□□□□ -2.28
SEC1YDR164C YRF1-5P0CX21 1796 aa0.81□□□□□ -2.28
SEC1YDR164C YRF1-8P0CX22 1796 aa0.81□□□□□ -2.28
SEC1YDR164C TY1B-JR2P47100 1755 aaKnown RBP0.81□□□□□ -2.28
SEC1YDR164C TY1B-ER2Q03619 1755 aa0.81□□□□□ -2.28
SEC1YDR164C TY1B-MR1Q04214 1755 aa0.81□□□□□ -2.28
SEC1YDR164C TY1B-MR2Q04670 1755 aaKnown RBP0.81□□□□□ -2.28
SEC1YDR164C TY1B-LR1Q12088 1755 aaKnown RBP0.81□□□□□ -2.28
SEC1YDR164C TY1B-NL1Q12112 1755 aa0.81□□□□□ -2.28
SEC1YDR164C TY1B-GR1Q12141 1755 aa0.81□□□□□ -2.28
SEC1YDR164C TY1B-BLQ12490 1755 aa0.81□□□□□ -2.28
SEC1YDR164C YBT1P32386 1661 aa0.81□□□□□ -2.28
SEC1YDR164C IRA2P19158 3079 aa0.81□□□□□ -2.28
SEC1YDR164C IRC20Q06554 1556 aa0.81□□□□□ -2.28
SEC1YDR164C YOR093CQ12275 1648 aa0.81□□□□□ -2.28
SEC1YDR164C YML003WP0CF16 290 aa0.81□□□□□ -2.28
SEC1YDR164C CDC24P11433 854 aaPredicted RBP0.81□□□□□ -2.28
SEC1YDR164C RED1P14291 827 aa0.81□□□□□ -2.28
SEC1YDR164C YCK1P23291 538 aa0.81□□□□□ -2.28
SEC1YDR164C SNT1P25357 1226 aa0.81□□□□□ -2.28
SEC1YDR164C MGT1P26188 188 aa0.81□□□□□ -2.28
SEC1YDR164C KRE2P27809 442 aa0.81□□□□□ -2.28
SEC1YDR164C SRB4P32569 687 aa0.81□□□□□ -2.28
SEC1YDR164C VMA8P32610 256 aaKnown RBP0.81□□□□□ -2.28
SEC1YDR164C NPL6P32832 435 aa0.81□□□□□ -2.28
SEC1YDR164C LOS1P33418 1100 aaPredicted RBP0.81□□□□□ -2.28
SEC1YDR164C SAS3P34218 831 aa0.81□□□□□ -2.28
SEC1YDR164C BLI1P35727 113 aa0.81□□□□□ -2.28
SEC1YDR164C YKL050CP35736 922 aa0.81□□□□□ -2.28
SEC1YDR164C KDX1P36005 433 aa0.81□□□□□ -2.28
SEC1YDR164C YKT6P36015 200 aaKnown RBP0.81□□□□□ -2.28
SEC1YDR164C ALY1P36117 915 aa0.81□□□□□ -2.28
SEC1YDR164C NOP4P37838 685 aaKnown RBP0.81□□□□□ -2.28
SEC1YDR164C UBP13P38187 747 aa0.81□□□□□ -2.28
SEC1YDR164C OLA1P38219 394 aaKnown RBP0.81□□□□□ -2.28
SEC1YDR164C RXT2P38255 430 aa0.81□□□□□ -2.28
SEC1YDR164C ERG7P38604 731 aa0.81□□□□□ -2.28
SEC1YDR164C VPS45P38932 577 aa0.81□□□□□ -2.28
SEC1YDR164C YEL057CP39983 233 aa0.81□□□□□ -2.28
SEC1YDR164C LSM5P40089 93 aaKnown RBP0.81□□□□□ -2.28
SEC1YDR164C PFK26P40433 827 aaKnown RBP0.81□□□□□ -2.28
SEC1YDR164C SPO22P40511 975 aa0.81□□□□□ -2.28
SEC1YDR164C AXL1P40851 1208 aa0.81□□□□□ -2.28
SEC1YDR164C DIM1P41819 318 aaKnown RBP0.81□□□□□ -2.28
SEC1YDR164C GPD2P41911 440 aaKnown RBP0.81□□□□□ -2.28
SEC1YDR164C SPG5P42933 373 aa0.81□□□□□ -2.28
SEC1YDR164C YFH7P43591 353 aa0.81□□□□□ -2.28
SEC1YDR164C MIC19P43594 170 aa0.81□□□□□ -2.28
SEC1YDR164C ARC1P46672 376 aaKnown RBP0.81□□□□□ -2.28
SEC1YDR164C AAD10P47182 288 aa0.81□□□□□ -2.28
SEC1YDR164C BRO1P48582 844 aa0.81□□□□□ -2.28
SEC1YDR164C HSH155P49955 971 aaKnown RBP0.81□□□□□ -2.28
SEC1YDR164C BOR1P53838 576 aa0.81□□□□□ -2.28
SEC1YDR164C YPL108WQ02872 168 aaPredicted RBP0.81□□□□□ -2.28
SEC1YDR164C MUB1Q03162 620 aa0.81□□□□□ -2.28
SEC1YDR164C SYF1Q04048 859 aaPredicted RBP0.81□□□□□ -2.28
SEC1YDR164C URH1Q04179 340 aa0.81□□□□□ -2.28
SEC1YDR164C UBX2Q04228 584 aa0.81□□□□□ -2.28
SEC1YDR164C ATG23Q06671 453 aa0.81□□□□□ -2.28
SEC1YDR164C GRC3Q07845 632 aa0.81□□□□□ -2.28
SEC1YDR164C YPL225WQ08971 146 aaKnown RBP0.81□□□□□ -2.28
SEC1YDR164C NMD4Q12129 218 aa0.81□□□□□ -2.28
SEC1YDR164C SPE4Q12455 300 aa0.81□□□□□ -2.28
SEC1YDR164C SKM1Q12469 655 aa0.81□□□□□ -2.28
SEC1YDR164C YOR019WQ99248 730 aa0.81□□□□□ -2.28
SEC1YDR164C Q0010Q9ZZX9 128 aa0.81□□□□□ -2.28
SEC1YDR164C NTE1Q04958 1679 aa0.81□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms