RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C PEX34P25584 144 aa2.06□□□□□ -2.08
BRE1YDL074C VMA6P32366 345 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C ASF2P32448 525 aaPredicted RBP2.06□□□□□ -2.08
BRE1YDL074C PRP21P32524 280 aaPredicted RBP2.06□□□□□ -2.08
BRE1YDL074C CDC5P32562 705 aa2.06□□□□□ -2.08
BRE1YDL074C UGP1P32861 499 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C DOM34P33309 386 aa2.06□□□□□ -2.08
BRE1YDL074C PTC1P35182 281 aa2.06□□□□□ -2.08
BRE1YDL074C THI80P35202 319 aa2.06□□□□□ -2.08
BRE1YDL074C MRPL17P36528 281 aa2.06□□□□□ -2.08
BRE1YDL074C PDX3P38075 228 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C ARP1P38696 384 aa2.06□□□□□ -2.08
BRE1YDL074C GOS1P38736 223 aa2.06□□□□□ -2.08
BRE1YDL074C PEX18P38855 283 aa2.06□□□□□ -2.08
BRE1YDL074C YHR218WP38899 603 aa2.06□□□□□ -2.08
BRE1YDL074C FAD1P38913 306 aa2.06□□□□□ -2.08
BRE1YDL074C CCT6P39079 546 aa2.06□□□□□ -2.08
BRE1YDL074C MNN9P39107 395 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C HEM14P40012 539 aa2.06□□□□□ -2.08
BRE1YDL074C RGI1P40043 161 aaPredicted RBP2.06□□□□□ -2.08
BRE1YDL074C MGS1P40151 587 aa2.06□□□□□ -2.08
BRE1YDL074C YJL070CP40361 888 aa2.06□□□□□ -2.08
BRE1YDL074C VHR1P40522 640 aa2.06□□□□□ -2.08
BRE1YDL074C GAB1P41733 394 aa2.06□□□□□ -2.08
BRE1YDL074C VMA13P41807 478 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C GYP8P43570 497 aa2.06□□□□□ -2.08
BRE1YDL074C IRC5P43610 853 aa2.06□□□□□ -2.08
BRE1YDL074C SUM1P46676 1062 aa2.06□□□□□ -2.08
BRE1YDL074C CSN12P47130 423 aa2.06□□□□□ -2.08
BRE1YDL074C PYK2P52489 506 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C RMR1P53060 241 aa2.06□□□□□ -2.08
BRE1YDL074C MPS2P53159 387 aa2.06□□□□□ -2.08
BRE1YDL074C SWC4P53201 476 aa2.06□□□□□ -2.08
BRE1YDL074C YGR250CP53316 781 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C PXR1P53335 271 aaPredicted RBP2.06□□□□□ -2.08
BRE1YDL074C DCP2P53550 970 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C REG1Q00816 1014 aa2.06□□□□□ -2.08
BRE1YDL074C YPL071CQ02864 156 aa2.06□□□□□ -2.08
BRE1YDL074C GAS3Q03655 524 aa2.06□□□□□ -2.08
BRE1YDL074C CLU1Q03690 1277 aaKnown RBP2.06□□□□□ -2.08
BRE1YDL074C YDR132CQ03900 495 aa2.06□□□□□ -2.08
BRE1YDL074C RAD30Q04049 632 aa2.06□□□□□ -2.08
BRE1YDL074C YDR124WQ04608 324 aa2.06□□□□□ -2.08
BRE1YDL074C BSP1Q06604 576 aa2.06□□□□□ -2.08
BRE1YDL074C RSC3Q06639 885 aa2.06□□□□□ -2.08
BRE1YDL074C ASA1Q06822 443 aa2.06□□□□□ -2.08
BRE1YDL074C MFG1Q07684 458 aa2.06□□□□□ -2.08
BRE1YDL074C RSB1Q08417 382 aa2.06□□□□□ -2.08
BRE1YDL074C FLC1Q08967 793 aa2.06□□□□□ -2.08
BRE1YDL074C YPQ1Q12010 308 aa2.06□□□□□ -2.08
BRE1YDL074C MRH1Q12117 320 aaPredicted RBP2.06□□□□□ -2.08
BRE1YDL074C NMD4Q12129 218 aa2.06□□□□□ -2.08
BRE1YDL074C HER1Q12276 1246 aa2.06□□□□□ -2.08
BRE1YDL074C PFK27Q12471 397 aaPredicted RBP2.06□□□□□ -2.08
BRE1YDL074C Q0010Q9ZZX9 128 aa2.06□□□□□ -2.08
BRE1YDL074C ARG3P05150 338 aa2.05□□□□□ -2.08
BRE1YDL074C RAD7P06779 565 aa2.05□□□□□ -2.08
BRE1YDL074C YAR066WP0CX18 203 aa2.05□□□□□ -2.08
BRE1YDL074C YHR214WP0CX19 203 aa2.05□□□□□ -2.08
BRE1YDL074C LAT1P12695 482 aaKnown RBP2.05□□□□□ -2.08
BRE1YDL074C UGA1P17649 471 aa2.05□□□□□ -2.08
BRE1YDL074C EPT1P22140 391 aa2.05□□□□□ -2.08
BRE1YDL074C YCK2P23292 546 aaKnown RBP2.05□□□□□ -2.08
BRE1YDL074C MEF1P25039 761 aa2.05□□□□□ -2.08
BRE1YDL074C GEX1P25596 615 aa2.05□□□□□ -2.08
BRE1YDL074C POL4P25615 582 aa2.05□□□□□ -2.08
BRE1YDL074C ISF1P32488 338 aa2.05□□□□□ -2.08
BRE1YDL074C RPT5P33297 434 aaKnown RBP2.05□□□□□ -2.08
BRE1YDL074C PEX6P33760 1030 aa2.05□□□□□ -2.08
BRE1YDL074C TIF3P34167 436 aaKnown RBP2.05□□□□□ -2.08
BRE1YDL074C GCS1P35197 352 aa2.05□□□□□ -2.08
BRE1YDL074C DEF1P35732 738 aaKnown RBP2.05□□□□□ -2.08
BRE1YDL074C YKL151CP36059 337 aa2.05□□□□□ -2.08
BRE1YDL074C GEX2P36173 615 aa2.05□□□□□ -2.08
BRE1YDL074C FMP23P38231 175 aa2.05□□□□□ -2.08
BRE1YDL074C YBR071WP38243 211 aa2.05□□□□□ -2.08
BRE1YDL074C YHR020WP38708 688 aaKnown RBP2.05□□□□□ -2.08
BRE1YDL074C GND1P38720 489 aaKnown RBP2.05□□□□□ -2.08
BRE1YDL074C HSE1P38753 452 aa2.05□□□□□ -2.08
BRE1YDL074C PEX28P38848 579 aa2.05□□□□□ -2.08
BRE1YDL074C RSP5P39940 809 aaKnown RBP2.05□□□□□ -2.08
BRE1YDL074C MOB1P40484 314 aa2.05□□□□□ -2.08
BRE1YDL074C TES1P41903 349 aaKnown RBP2.05□□□□□ -2.08
BRE1YDL074C YJR149WP47177 404 aa2.05□□□□□ -2.08
BRE1YDL074C YJR154WP47181 346 aa2.05□□□□□ -2.08
BRE1YDL074C AMA1P50082 593 aa2.05□□□□□ -2.08
BRE1YDL074C ROM1P53046 1155 aa2.05□□□□□ -2.08
BRE1YDL074C MNT2P53059 558 aa2.05□□□□□ -2.08
BRE1YDL074C YNR065CP53751 1116 aa2.05□□□□□ -2.08
BRE1YDL074C ASI2P53895 289 aa2.05□□□□□ -2.08
BRE1YDL074C COG5P53951 403 aa2.05□□□□□ -2.08
BRE1YDL074C YPL107WQ02873 248 aa2.05□□□□□ -2.08
BRE1YDL074C YMR010WQ03687 405 aa2.05□□□□□ -2.08
BRE1YDL074C FAR10Q06001 478 aa2.05□□□□□ -2.08
BRE1YDL074C RIF2Q06208 395 aa2.05□□□□□ -2.08
BRE1YDL074C LOT6Q07923 191 aa2.05□□□□□ -2.08
BRE1YDL074C NOP12Q08208 459 aaKnown RBP2.05□□□□□ -2.08
BRE1YDL074C RRT8Q08219 342 aa2.05□□□□□ -2.08
BRE1YDL074C THP1Q08231 455 aa2.05□□□□□ -2.08
BRE1YDL074C GPB1Q08886 897 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms