RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C SDS3P40505 327 aa2.34□□□□□ -2.03
PRP6YBR055C IMD3P50095 523 aaKnown RBP2.34□□□□□ -2.03
PRP6YBR055C HST1P53685 503 aa2.34□□□□□ -2.03
PRP6YBR055C YNL058CP53947 316 aa2.34□□□□□ -2.03
PRP6YBR055C RPN9Q04062 393 aaKnown RBP2.34□□□□□ -2.03
PRP6YBR055C ATG26Q06321 1198 aa2.34□□□□□ -2.03
PRP6YBR055C MCH4Q08268 501 aa2.34□□□□□ -2.03
PRP6YBR055C MED2Q12124 431 aa2.34□□□□□ -2.03
PRP6YBR055C CAR1P00812 333 aaKnown RBP2.34□□□□□ -2.03
PRP6YBR055C CLB2P24869 491 aa2.34□□□□□ -2.03
PRP6YBR055C ELM1P32801 640 aa2.34□□□□□ -2.03
PRP6YBR055C MIA40P36046 403 aa2.34□□□□□ -2.03
PRP6YBR055C STV1P37296 890 aa2.34□□□□□ -2.03
PRP6YBR055C ROT2P38138 954 aa2.34□□□□□ -2.03
PRP6YBR055C VHS2P40463 436 aa2.34□□□□□ -2.03
PRP6YBR055C RPS0BP46654 252 aaKnown RBP2.34□□□□□ -2.03
PRP6YBR055C ORC5P50874 479 aa2.34□□□□□ -2.03
PRP6YBR055C RMD9P53140 646 aaKnown RBP2.34□□□□□ -2.03
PRP6YBR055C SMM1P53720 384 aaKnown RBP2.34□□□□□ -2.03
PRP6YBR055C HEF3P53978 1044 aaKnown RBP2.34□□□□□ -2.03
PRP6YBR055C SNU56Q03782 492 aaKnown RBP2.34□□□□□ -2.03
PRP6YBR055C NOP6Q07623 225 aaKnown RBP2.34□□□□□ -2.03
PRP6YBR055C MLH2Q07980 695 aa2.34□□□□□ -2.03
PRP6YBR055C APL5Q08951 932 aaKnown RBP2.34□□□□□ -2.03
PRP6YBR055C ESP1Q03018 1630 aa2.34□□□□□ -2.04
PRP6YBR055C RKR1Q04781 1562 aa2.34□□□□□ -2.04
PRP6YBR055C CBP1P07252 654 aa2.33□□□□□ -2.04
PRP6YBR055C RRP1P35178 278 aaPredicted RBP2.33□□□□□ -2.04
PRP6YBR055C BNA4P38169 460 aa2.33□□□□□ -2.04
PRP6YBR055C MLH1P38920 769 aa2.33□□□□□ -2.04
PRP6YBR055C RTT105P40063 208 aa2.33□□□□□ -2.04
PRP6YBR055C LYS20P48570 428 aaKnown RBP2.33□□□□□ -2.04
PRP6YBR055C ZPR1P53303 486 aaKnown RBP2.33□□□□□ -2.04
PRP6YBR055C GND2P53319 492 aa2.33□□□□□ -2.04
PRP6YBR055C YNL143CP53908 130 aa2.33□□□□□ -2.04
PRP6YBR055C SLG1P54867 378 aa2.33□□□□□ -2.04
PRP6YBR055C PRO2P54885 456 aaKnown RBP2.33□□□□□ -2.04
PRP6YBR055C TMN2Q04562 672 aa2.33□□□□□ -2.04
PRP6YBR055C RTC5Q12108 567 aaKnown RBP2.33□□□□□ -2.04
PRP6YBR055C ADE5,7P07244 802 aaKnown RBP2.33□□□□□ -2.04
PRP6YBR055C ARO3P14843 370 aaKnown RBP2.33□□□□□ -2.04
PRP6YBR055C ATP10P18496 279 aa2.33□□□□□ -2.04
PRP6YBR055C SPC110P32380 944 aa2.33□□□□□ -2.04
PRP6YBR055C RIM1P32445 135 aaKnown RBP2.33□□□□□ -2.04
PRP6YBR055C RIB7P33312 244 aa2.33□□□□□ -2.04
PRP6YBR055C YKL023WP36103 277 aaKnown RBP2.33□□□□□ -2.04
PRP6YBR055C PCH2P38126 564 aa2.33□□□□□ -2.04
PRP6YBR055C ARP1P38696 384 aa2.33□□□□□ -2.04
PRP6YBR055C YIL060WP40519 144 aa2.33□□□□□ -2.04
PRP6YBR055C ULP2P40537 1034 aaPredicted RBP2.33□□□□□ -2.04
PRP6YBR055C CIN1P40987 1014 aa2.33□□□□□ -2.04
PRP6YBR055C YIP5P53108 310 aa2.33□□□□□ -2.04
PRP6YBR055C ASI1P54074 624 aa2.33□□□□□ -2.04
PRP6YBR055C FMP30Q02883 468 aa2.33□□□□□ -2.04
PRP6YBR055C RBA50Q04418 439 aa2.33□□□□□ -2.04
PRP6YBR055C NCE102Q12207 173 aaRIP-Chip data2.33□□□□□ -2.04not detected
PRP6YBR055C SUT2Q12286 268 aa2.33□□□□□ -2.04
PRP6YBR055C RIP1P08067 215 aa2.33□□□□□ -2.04
PRP6YBR055C PMR1P13586 950 aa2.33□□□□□ -2.04
PRP6YBR055C MAK32P23060 363 aa2.33□□□□□ -2.04
PRP6YBR055C GRR1P24814 1151 aa2.33□□□□□ -2.04
PRP6YBR055C RHB1P25378 209 aa2.33□□□□□ -2.04
PRP6YBR055C KRE2P27809 442 aa2.33□□□□□ -2.04
PRP6YBR055C SRB2P34162 210 aa2.33□□□□□ -2.04
PRP6YBR055C OCT1P35999 772 aa2.33□□□□□ -2.04
PRP6YBR055C TCM62P38228 572 aaKnown RBP2.33□□□□□ -2.04
PRP6YBR055C POP1P41812 875 aa2.33□□□□□ -2.04
PRP6YBR055C TOM22P49334 152 aa2.33□□□□□ -2.04
PRP6YBR055C PYK2P52489 506 aaKnown RBP2.33□□□□□ -2.04
PRP6YBR055C BUD32P53323 261 aa2.33□□□□□ -2.04
PRP6YBR055C YFH1Q07540 174 aa2.33□□□□□ -2.04
PRP6YBR055C RDR1Q08904 546 aa2.33□□□□□ -2.04
PRP6YBR055C TAL1P15019 335 aaKnown RBP2.32□□□□□ -2.04
PRP6YBR055C RPB8P20436 146 aa2.32□□□□□ -2.04
PRP6YBR055C UBA1P22515 1024 aaKnown RBP2.32□□□□□ -2.04
PRP6YBR055C SGV1P23293 657 aaKnown RBP2.32□□□□□ -2.04
PRP6YBR055C GSY2P27472 705 aa2.32□□□□□ -2.04
PRP6YBR055C CRM1P30822 1084 aaKnown RBP2.32□□□□□ -2.04
PRP6YBR055C MSN2P33748 704 aa2.32□□□□□ -2.04
PRP6YBR055C UBA4P38820 440 aa2.32□□□□□ -2.04
PRP6YBR055C YHR210CP38893 341 aa2.32□□□□□ -2.04
PRP6YBR055C YER130CP39959 443 aa2.32□□□□□ -2.04
PRP6YBR055C APM1Q00776 475 aaPredicted RBP2.32□□□□□ -2.04
PRP6YBR055C MGR3Q04472 501 aa2.32□□□□□ -2.04
PRP6YBR055C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
PRP6YBR055C RDL1Q12305 139 aaKnown RBP2.32□□□□□ -2.04
PRP6YBR055C TY1B-BRQ12193 1756 aa2.32□□□□□ -2.04
PRP6YBR055C TY1B-GR3Q12316 1755 aa2.32□□□□□ -2.04
PRP6YBR055C TY1B-ORQ92393 1755 aa2.32□□□□□ -2.04
PRP6YBR055C RAD52P06778 471 aaKnown RBP2.32□□□□□ -2.04
PRP6YBR055C YMR085WP0CF18 432 aa2.32□□□□□ -2.04
PRP6YBR055C TYR1P20049 452 aa2.32□□□□□ -2.04
PRP6YBR055C DAL80P26343 269 aa2.32□□□□□ -2.04
PRP6YBR055C SSE1P32589 693 aaKnown RBP2.32□□□□□ -2.04
PRP6YBR055C PPQ1P32945 549 aa2.32□□□□□ -2.04
PRP6YBR055C MNL1P38888 796 aa2.32□□□□□ -2.04
PRP6YBR055C YMR124WP39523 943 aaKnown RBP2.32□□□□□ -2.04
PRP6YBR055C YMR147WP40218 223 aaKnown RBP2.32□□□□□ -2.04
PRP6YBR055C ROG1P53118 685 aa2.32□□□□□ -2.04
PRP6YBR055C PIB2P53191 635 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms