RNA–Protein interactions for RNA: YAL062W

GDH3, Transcript of NADP(+)-dependent glutamate dehydrogenase, yeast

Gene GDH3, Length 1,374 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDH3	YAL062W	HMO1	Q03973	246 aa	Known RBP	10.1	□□□□□ -0.79
GDH3	YAL062W	MUM3	Q08750	479 aa		10.1	□□□□□ -0.79
GDH3	YAL062W	ADF1	Q2V2Q1	113 aa		10.1	□□□□□ -0.79
GDH3	YAL062W	YKL018C-A	Q3E7A7	99 aa		10.1	□□□□□ -0.79
GDH3	YAL062W	FAB1	P34756	2278 aa		10.1	□□□□□ -0.79
GDH3	YAL062W	MDM35	O60200	86 aa		10.09	□□□□□ -0.79
GDH3	YAL062W	AAR2	P32357	355 aa	Predicted RBP	10.09	□□□□□ -0.79
GDH3	YAL062W	MGM101	P32787	269 aa	Known RBP	10.09	□□□□□ -0.79
GDH3	YAL062W	EMC3	P36039	253 aa		10.09	□□□□□ -0.79
GDH3	YAL062W	SRX1	P36077	127 aa		10.09	□□□□□ -0.79
GDH3	YAL062W	MRPL37	P36532	105 aa		10.09	□□□□□ -0.79
GDH3	YAL062W	ROT2	P38138	954 aa		10.09	□□□□□ -0.79
GDH3	YAL062W	DED81	P38707	554 aa	Known RBP	10.09	□□□□□ -0.79
GDH3	YAL062W	AXL2	P38928	823 aa		10.09	□□□□□ -0.79
GDH3	YAL062W	COS12	P53053	380 aa		10.09	□□□□□ -0.79
GDH3	YAL062W	ARI1	P53111	347 aa	Known RBP	10.09	□□□□□ -0.79
GDH3	YAL062W	RPM2	Q02773	1202 aa		10.09	□□□□□ -0.79
GDH3	YAL062W	MET31	Q03081	177 aa		10.09	□□□□□ -0.79
GDH3	YAL062W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	10.09	□□□□□ -0.79	not detected
GDH3	YAL062W	RTT10	Q08924	1013 aa		10.09	□□□□□ -0.79
GDH3	YAL062W	SUL2	Q12325	893 aa		10.09	□□□□□ -0.79
GDH3	YAL062W	COX3	P00420	269 aa		10.08	□□□□□ -0.8
GDH3	YAL062W	RPS4A	P0CX35	261 aa	Known RBP	10.08	□□□□□ -0.8
GDH3	YAL062W	RPS4B	P0CX36	261 aa	Known RBP	10.08	□□□□□ -0.8
GDH3	YAL062W	TOP3	P13099	656 aa		10.08	□□□□□ -0.8
GDH3	YAL062W	FUN30	P31380	1131 aa		10.08	□□□□□ -0.8
GDH3	YAL062W	MRPL17	P36528	281 aa		10.08	□□□□□ -0.8
GDH3	YAL062W	WSC4	P38739	605 aa		10.08	□□□□□ -0.8
GDH3	YAL062W	PFS1	P38872	237 aa		10.08	□□□□□ -0.8
GDH3	YAL062W	TIF34	P40217	347 aa	Known RBP	10.08	□□□□□ -0.8
GDH3	YAL062W	FMP33	P46998	180 aa		10.08	□□□□□ -0.8
GDH3	YAL062W	GIP3	Q03016	1276 aa		10.08	□□□□□ -0.8
GDH3	YAL062W	BSC2	Q05611	235 aa		10.08	□□□□□ -0.8
GDH3	YAL062W	ASA1	Q06822	443 aa		10.08	□□□□□ -0.8
GDH3	YAL062W	TFB4	Q12004	338 aa		10.08	□□□□□ -0.8
GDH3	YAL062W	NMD4	Q12129	218 aa		10.08	□□□□□ -0.8
GDH3	YAL062W	YVC1	Q12324	675 aa		10.08	□□□□□ -0.8
GDH3	YAL062W	HRP1	Q99383	534 aa	Known RBP	10.08	□□□□□ -0.8
GDH3	YAL062W	MSS116	P15424	664 aa	Known RBP	10.07	□□□□□ -0.8
GDH3	YAL062W	ZUO1	P32527	433 aa	Known RBP	10.07	□□□□□ -0.8
GDH3	YAL062W	ATO2	P32907	282 aa		10.07	□□□□□ -0.8
GDH3	YAL062W	CAB2	P40506	365 aa		10.07	□□□□□ -0.8
GDH3	YAL062W	AIM22	P47051	409 aa		10.07	□□□□□ -0.8
GDH3	YAL062W	YNL140C	P53910	189 aa		10.07	□□□□□ -0.8
GDH3	YAL062W	SPC2	Q04969	178 aa		10.07	□□□□□ -0.8
GDH3	YAL062W	EAF1	Q06337	982 aa		10.07	□□□□□ -0.8
GDH3	YAL062W	NKP1	Q12493	238 aa		10.07	□□□□□ -0.8
GDH3	YAL062W	RAP1	P11938	827 aa		10.06	□□□□□ -0.8
GDH3	YAL062W	AST1	P35183	429 aa		10.06	□□□□□ -0.8
GDH3	YAL062W	UBP14	P38237	781 aa	Known RBP	10.06	□□□□□ -0.8
GDH3	YAL062W	TRM7	P38238	310 aa	Known RBP	10.06	□□□□□ -0.8
GDH3	YAL062W	PCF11	P39081	626 aa	Predicted RBP	10.06	□□□□□ -0.8
GDH3	YAL062W	GAB1	P41733	394 aa		10.06	□□□□□ -0.8
GDH3	YAL062W	SSU1	P41930	458 aa		10.06	□□□□□ -0.8
GDH3	YAL062W	TY4A-J	P47023	414 aa		10.06	□□□□□ -0.8
GDH3	YAL062W	UPF3	P48412	387 aa	Known RBP	10.06	□□□□□ -0.8
GDH3	YAL062W	GET1	P53192	235 aa		10.06	□□□□□ -0.8
GDH3	YAL062W	YHC1	Q05900	231 aa	Known RBP	10.06	□□□□□ -0.8
GDH3	YAL062W	YLL054C	Q12244	843 aa		10.06	□□□□□ -0.8
GDH3	YAL062W	RAS2	P01120	322 aa	Known RBP	10.05	□□□□□ -0.8
GDH3	YAL062W	ARG3	P05150	338 aa		10.05	□□□□□ -0.8
GDH3	YAL062W	RPS21A	P0C0V8	87 aa	Known RBP	10.05	□□□□□ -0.8
GDH3	YAL062W	YAK1	P14680	807 aa		10.05	□□□□□ -0.8
GDH3	YAL062W	ERG6	P25087	383 aa	Known RBP	10.05	□□□□□ -0.8
GDH3	YAL062W	TRX3	P25372	127 aa		10.05	□□□□□ -0.8
GDH3	YAL062W	KKQ8	P36004	724 aa		10.05	□□□□□ -0.8
GDH3	YAL062W	COS111	P38308	924 aa		10.05	□□□□□ -0.8
GDH3	YAL062W	SGF73	P53165	657 aa		10.05	□□□□□ -0.8
GDH3	YAL062W	CTK1	Q03957	528 aa	Known RBP	10.05	□□□□□ -0.8
GDH3	YAL062W	YKU80	Q04437	629 aa		10.05	□□□□□ -0.8
GDH3	YAL062W	GMC2	Q06201	188 aa		10.05	□□□□□ -0.8
GDH3	YAL062W	TAF3	Q12297	353 aa		10.05	□□□□□ -0.8
GDH3	YAL062W	LEU4	P06208	619 aa	Known RBP	10.04	□□□□□ -0.8
GDH3	YAL062W	LAT1	P12695	482 aa	Known RBP	10.04	□□□□□ -0.8
GDH3	YAL062W	UGA1	P17649	471 aa		10.04	□□□□□ -0.8
GDH3	YAL062W	URA4	P20051	364 aa		10.04	□□□□□ -0.8
GDH3	YAL062W	PRI2	P20457	528 aa		10.04	□□□□□ -0.8
GDH3	YAL062W	PPH21	P23594	369 aa		10.04	□□□□□ -0.8
GDH3	YAL062W	VPS21	P36017	210 aa	Known RBP	10.04	□□□□□ -0.8
GDH3	YAL062W	PDX3	P38075	228 aa	Known RBP	10.04	□□□□□ -0.8
GDH3	YAL062W	ATG7	P38862	630 aa		10.04	□□□□□ -0.8
GDH3	YAL062W	YIL108W	P40483	696 aa	Known RBP	10.04	□□□□□ -0.8
GDH3	YAL062W	FMP32	P43557	207 aa		10.04	□□□□□ -0.8
GDH3	YAL062W	NOP9	P47077	666 aa	Known RBP	10.04	□□□□□ -0.8
GDH3	YAL062W	MNN10	P50108	393 aa	Known RBP	10.04	□□□□□ -0.8
GDH3	YAL062W	KXD1	P53158	218 aa		10.04	□□□□□ -0.8
GDH3	YAL062W	YGR016W	P53209	190 aa		10.04	□□□□□ -0.8
GDH3	YAL062W	YNL033W	P53964	284 aa		10.04	□□□□□ -0.8
GDH3	YAL062W	YNL019C	P53975	284 aa		10.04	□□□□□ -0.8
GDH3	YAL062W	SVL3	Q03088	825 aa	Known RBP	10.04	□□□□□ -0.8
GDH3	YAL062W	MUS81	Q04149	632 aa	Predicted RBP	10.04	□□□□□ -0.8
GDH3	YAL062W	RAD33	Q04231	177 aa		10.04	□□□□□ -0.8
GDH3	YAL062W	PFA4	Q12006	378 aa		10.04	□□□□□ -0.8
GDH3	YAL062W	RPN5	Q12250	445 aa	Known RBP	10.04	□□□□□ -0.8
GDH3	YAL062W	GPR1	Q12361	961 aa		10.04	□□□□□ -0.8
GDH3	YAL062W	ARG81	P05085	880 aa		10.03	□□□□□ -0.8
GDH3	YAL062W	MSS18	P08593	268 aa		10.03	□□□□□ -0.8
GDH3	YAL062W	KAR1	P11927	433 aa		10.03	□□□□□ -0.8
GDH3	YAL062W	RVS161	P25343	265 aa	Known RBP	10.03	□□□□□ -0.8
GDH3	YAL062W	SLM5	P25345	492 aa	Known RBP	10.03	□□□□□ -0.8

Retrieved 100 of 5,963 RNA–protein pairs in 68.8 ms