RNA–Protein interactions for RNA: YPR138C

MEP3, Transcript of Ammonium permease of high capacity and low affinity, yeastyeast

Gene MEP3, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MEP3YPR138C MIF2P35201 549 aa12.54□□□□□ -0.4
MEP3YPR138C RIA1P53893 1110 aa12.53□□□□□ -0.4
MEP3YPR138C YNR029CP53729 429 aaKnown RBP12.45□□□□□ -0.42
MEP3YPR138C PDS5Q04264 1277 aa12.45□□□□□ -0.42
MEP3YPR138C SPT7P35177 1332 aa12.44□□□□□ -0.42
MEP3YPR138C YMR196WQ04336 1088 aa12.44□□□□□ -0.42
MEP3YPR138C PSK1P31374 1356 aa12.43□□□□□ -0.42
MEP3YPR138C TY4B-HP0C2J7 1802 aa12.41□□□□□ -0.42
MEP3YPR138C TY4B-JP47024 1803 aa12.41□□□□□ -0.42
MEP3YPR138C CHZ1P40019 153 aaPredicted RBP12.4□□□□□ -0.42
MEP3YPR138C YML133CQ03099 1374 aa12.38□□□□□ -0.43
MEP3YPR138C YLL067CQ07888 1374 aa12.38□□□□□ -0.43
MEP3YPR138C YLL066CQ99208 1374 aa12.38□□□□□ -0.43
MEP3YPR138C FKH1P40466 484 aa12.38□□□□□ -0.43
MEP3YPR138C RCM1P53972 490 aa12.38□□□□□ -0.43
MEP3YPR138C PSD2P53037 1138 aaKnown RBP12.36□□□□□ -0.43
MEP3YPR138C CPS1P27614 576 aa12.35□□□□□ -0.43
MEP3YPR138C PPH3P32345 308 aa12.35□□□□□ -0.43
MEP3YPR138C ENP1P38333 483 aaKnown RBP12.35□□□□□ -0.43
MEP3YPR138C THI12P42883 340 aa12.34□□□□□ -0.43
MEP3YPR138C THI5P43534 340 aa12.34□□□□□ -0.43
MEP3YPR138C THI11P47183 340 aa12.34□□□□□ -0.43
MEP3YPR138C THI13Q07748 340 aa12.34□□□□□ -0.43
MEP3YPR138C RTG3P38165 486 aa12.33□□□□□ -0.44
MEP3YPR138C NSR1P27476 414 aaKnown RBP RIP-Chip data12.28□□□□□ -0.44not detected
MEP3YPR138C ADE6P38972 1358 aaKnown RBP12.28□□□□□ -0.44
MEP3YPR138C NST1P53935 1240 aa12.27□□□□□ -0.44
MEP3YPR138C YIL177CP40434 1758 aa12.27□□□□□ -0.45
MEP3YPR138C YJL225CP40889 1758 aa12.27□□□□□ -0.45
MEP3YPR138C RRP5Q05022 1729 aaKnown RBP12.25□□□□□ -0.45
MEP3YPR138C SNF2P22082 1703 aa12.25□□□□□ -0.45
MEP3YPR138C LEU2P04173 364 aaPredicted RBP12.24□□□□□ -0.45
MEP3YPR138C LEU3P08638 886 aa12.24□□□□□ -0.45
MEP3YPR138C MTR4P47047 1073 aaKnown RBP12.23□□□□□ -0.45
MEP3YPR138C NOP2P40991 618 aaKnown RBP12.21□□□□□ -0.45
MEP3YPR138C PRP43P53131 767 aaKnown RBP12.21□□□□□ -0.46
MEP3YPR138C YRF1-2P40105 1681 aa12.19□□□□□ -0.46
MEP3YPR138C FKS3Q04952 1785 aa12.19□□□□□ -0.46
MEP3YPR138C YEF3P16521 1044 aaKnown RBP12.19□□□□□ -0.46
MEP3YPR138C IOC4Q04213 475 aa12.18□□□□□ -0.46
MEP3YPR138C TAP42Q04372 366 aa12.18□□□□□ -0.46
MEP3YPR138C PDI1P17967 522 aaKnown RBP12.17□□□□□ -0.46
MEP3YPR138C YFR006WP43590 535 aa12.17□□□□□ -0.46
MEP3YPR138C URB1P34241 1764 aaKnown RBP12.17□□□□□ -0.46
MEP3YPR138C MRPL32P25348 183 aa12.16□□□□□ -0.46
MEP3YPR138C APC1P53886 1748 aa12.15□□□□□ -0.46
MEP3YPR138C AUS1Q08409 1394 aa12.15□□□□□ -0.46
MEP3YPR138C TRK1P12685 1235 aa12.14□□□□□ -0.47
MEP3YPR138C GRX4P32642 244 aa12.13□□□□□ -0.47
MEP3YPR138C CSE4P36012 229 aa12.12□□□□□ -0.47
MEP3YPR138C PTP3P40048 928 aa12.12□□□□□ -0.47
MEP3YPR138C RTF1P53064 558 aa12.12□□□□□ -0.47
MEP3YPR138C RPS24AP0CX31 135 aaKnown RBP12.11□□□□□ -0.47
MEP3YPR138C RPS24BP0CX32 135 aaKnown RBP12.11□□□□□ -0.47
MEP3YPR138C AVT3P36062 692 aa12.11□□□□□ -0.47
MEP3YPR138C DIP2Q12220 943 aaPredicted RBP12.11□□□□□ -0.47
MEP3YPR138C KAR2P16474 682 aaKnown RBP12.08□□□□□ -0.47
MEP3YPR138C PRS1P32895 427 aaKnown RBP12.08□□□□□ -0.47
MEP3YPR138C HIM1Q06674 414 aa12.06□□□□□ -0.48
MEP3YPR138C RPO41P13433 1351 aaKnown RBP12.04□□□□□ -0.48
MEP3YPR138C RPP0P05317 312 aaKnown RBP12.03□□□□□ -0.48
MEP3YPR138C YRF1-3P0CX14 1859 aa12.02□□□□□ -0.49
MEP3YPR138C YRF1-7P0CX15 1859 aa12.02□□□□□ -0.49
MEP3YPR138C YRF1-6P53819 1859 aa12.02□□□□□ -0.49
MEP3YPR138C DPS1P04802 557 aaKnown RBP12.02□□□□□ -0.49
MEP3YPR138C RRP46P53256 223 aaPredicted RBP12.02□□□□□ -0.49
MEP3YPR138C GAS4Q08271 471 aa12.02□□□□□ -0.49
MEP3YPR138C PRP5P21372 849 aaPredicted RBP12.01□□□□□ -0.49
MEP3YPR138C PRP45P28004 379 aaPredicted RBP12□□□□□ -0.49
MEP3YPR138C YDL144CQ07589 356 aa11.97□□□□□ -0.49
MEP3YPR138C VPS27P40343 622 aaKnown RBP11.96□□□□□ -0.49
MEP3YPR138C MSB3P48566 633 aaPredicted RBP11.96□□□□□ -0.49
MEP3YPR138C SLM3Q12093 417 aa11.96□□□□□ -0.49
MEP3YPR138C RTR1P40084 226 aaPredicted RBP11.95□□□□□ -0.5
MEP3YPR138C PAP2P53632 584 aaKnown RBP11.95□□□□□ -0.5
MEP3YPR138C CDC45Q08032 650 aa11.95□□□□□ -0.5
MEP3YPR138C YRF1-4O13559 1382 aa11.93□□□□□ -0.5
MEP3YPR138C REB1P21538 810 aa11.93□□□□□ -0.5
MEP3YPR138C YGL015CP33199 130 aa11.93□□□□□ -0.5
MEP3YPR138C MPP10P47083 593 aaKnown RBP11.92□□□□□ -0.5
MEP3YPR138C YAH1Q12184 172 aaKnown RBP11.92□□□□□ -0.5
MEP3YPR138C RSF2P46974 1380 aa11.92□□□□□ -0.5
MEP3YPR138C PRD1P25375 712 aa11.91□□□□□ -0.5
MEP3YPR138C TCB1Q12466 1186 aa11.89□□□□□ -0.51
MEP3YPR138C ENT1Q12518 454 aa11.89□□□□□ -0.51
MEP3YPR138C AKL1P38080 1108 aaKnown RBP11.89□□□□□ -0.51
MEP3YPR138C SIR4P11978 1358 aa11.88□□□□□ -0.51
MEP3YPR138C BUB1P41695 1021 aaKnown RBP RIP-Chip data11.88□□□□□ -0.51not detected
MEP3YPR138C SUI2P20459 304 aaKnown RBP11.87□□□□□ -0.51
MEP3YPR138C THI22Q06490 572 aa11.87□□□□□ -0.51
MEP3YPR138C XKS1P42826 600 aa11.86□□□□□ -0.51
MEP3YPR138C DSD1P53095 428 aa11.86□□□□□ -0.51
MEP3YPR138C YRB30P53107 440 aaPredicted RBP11.86□□□□□ -0.51
MEP3YPR138C RVB2Q12464 471 aaKnown RBP11.86□□□□□ -0.51
MEP3YPR138C APP1P53933 587 aa11.84□□□□□ -0.51
MEP3YPR138C ENV9Q08651 330 aa11.84□□□□□ -0.51
MEP3YPR138C RIM15P43565 1770 aa11.83□□□□□ -0.51
MEP3YPR138C SAP155P43612 1002 aa11.83□□□□□ -0.52
MEP3YPR138C HEF3P53978 1044 aaKnown RBP11.83□□□□□ -0.52
MEP3YPR138C CTF4Q01454 927 aa11.82□□□□□ -0.52
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms