RNA–Protein interactions for RNA: YOR339C

UBC11, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC11, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC11YOR339C SPE2P21182 396 aa7.96□□□□□ -1.14
UBC11YOR339C YLR419WQ06698 1435 aaKnown RBP7.95□□□□□ -1.14
UBC11YOR339C POL5P39985 1022 aaKnown RBP7.95□□□□□ -1.14
UBC11YOR339C TSR3Q12094 313 aaKnown RBP7.94□□□□□ -1.14
UBC11YOR339C RCM1P53972 490 aa7.93□□□□□ -1.14
UBC11YOR339C PPH3P32345 308 aa7.9□□□□□ -1.14
UBC11YOR339C CPS1P27614 576 aa7.89□□□□□ -1.15
UBC11YOR339C CHZ1P40019 153 aaPredicted RBP7.89□□□□□ -1.15
UBC11YOR339C MLP1Q02455 1875 aaKnown RBP7.88□□□□□ -1.15
UBC11YOR339C TY4B-HP0C2J7 1802 aa7.88□□□□□ -1.15
UBC11YOR339C TY4B-JP47024 1803 aa7.88□□□□□ -1.15
UBC11YOR339C PSK1P31374 1356 aa7.86□□□□□ -1.15
UBC11YOR339C PTP3P40048 928 aa7.85□□□□□ -1.15
UBC11YOR339C MHP1P43638 1398 aa7.84□□□□□ -1.15
UBC11YOR339C SCT1P32784 759 aa7.84□□□□□ -1.15
UBC11YOR339C RRP5Q05022 1729 aaKnown RBP7.83□□□□□ -1.16
UBC11YOR339C RPL17AP05740 184 aaKnown RBP7.82□□□□□ -1.16
UBC11YOR339C RPL17BP46990 184 aaKnown RBP7.82□□□□□ -1.16
UBC11YOR339C YML133CQ03099 1374 aa7.82□□□□□ -1.16
UBC11YOR339C YLL067CQ07888 1374 aa7.82□□□□□ -1.16
UBC11YOR339C YLL066CQ99208 1374 aa7.82□□□□□ -1.16
UBC11YOR339C PDS5Q04264 1277 aa7.81□□□□□ -1.16
UBC11YOR339C RTG3P38165 486 aa7.8□□□□□ -1.16
UBC11YOR339C YCK3P39962 524 aa7.8□□□□□ -1.16
UBC11YOR339C FKH1P40466 484 aa7.8□□□□□ -1.16
UBC11YOR339C ADE6P38972 1358 aaKnown RBP7.8□□□□□ -1.16
UBC11YOR339C LEU2P04173 364 aaPredicted RBP7.79□□□□□ -1.16
UBC11YOR339C MTR4P47047 1073 aaKnown RBP7.77□□□□□ -1.17
UBC11YOR339C CSE4P36012 229 aa7.76□□□□□ -1.17
UBC11YOR339C APP1P53933 587 aa7.76□□□□□ -1.17
UBC11YOR339C YAH1Q12184 172 aaKnown RBP7.76□□□□□ -1.17
UBC11YOR339C YIL177CP40434 1758 aa7.76□□□□□ -1.17
UBC11YOR339C YJL225CP40889 1758 aa7.76□□□□□ -1.17
UBC11YOR339C RPS24AP0CX31 135 aaKnown RBP7.75□□□□□ -1.17
UBC11YOR339C RPS24BP0CX32 135 aaKnown RBP7.75□□□□□ -1.17
UBC11YOR339C REB1P21538 810 aa7.75□□□□□ -1.17
UBC11YOR339C PRP45P28004 379 aaPredicted RBP7.75□□□□□ -1.17
UBC11YOR339C PRP43P53131 767 aaKnown RBP7.75□□□□□ -1.17
UBC11YOR339C YRF1-2P40105 1681 aa7.74□□□□□ -1.17
UBC11YOR339C ENT1Q12518 454 aa7.74□□□□□ -1.17
UBC11YOR339C PRP5P21372 849 aaPredicted RBP7.73□□□□□ -1.17
UBC11YOR339C PSD2P53037 1138 aaKnown RBP7.73□□□□□ -1.17
UBC11YOR339C NST1P53935 1240 aa7.73□□□□□ -1.17
UBC11YOR339C HAA1Q12753 694 aaKnown RBP7.72□□□□□ -1.17
UBC11YOR339C ENV9Q08651 330 aa7.71□□□□□ -1.18
UBC11YOR339C SPT7P35177 1332 aa7.71□□□□□ -1.18
UBC11YOR339C URB1P34241 1764 aaKnown RBP7.7□□□□□ -1.18
UBC11YOR339C MSB3P48566 633 aaPredicted RBP7.7□□□□□ -1.18
UBC11YOR339C SEC3P33332 1336 aaKnown RBP7.7□□□□□ -1.18
UBC11YOR339C FKS3Q04952 1785 aa7.69□□□□□ -1.18
UBC11YOR339C LEU3P08638 886 aa7.69□□□□□ -1.18
UBC11YOR339C PDI1P17967 522 aaKnown RBP7.69□□□□□ -1.18
UBC11YOR339C YEF3P16521 1044 aaKnown RBP7.68□□□□□ -1.18
UBC11YOR339C RTF1P53064 558 aa7.68□□□□□ -1.18
UBC11YOR339C GAS4Q08271 471 aa7.68□□□□□ -1.18
UBC11YOR339C AUS1Q08409 1394 aa7.68□□□□□ -1.18
UBC11YOR339C DPS1P04802 557 aaKnown RBP7.67□□□□□ -1.18
UBC11YOR339C TAP42Q04372 366 aa7.67□□□□□ -1.18
UBC11YOR339C HIM1Q06674 414 aa7.67□□□□□ -1.18
UBC11YOR339C SLM3Q12093 417 aa7.67□□□□□ -1.18
UBC11YOR339C TRK1P12685 1235 aa7.66□□□□□ -1.18
UBC11YOR339C APC1P53886 1748 aa7.66□□□□□ -1.18
UBC11YOR339C YRF1-3P0CX14 1859 aa7.66□□□□□ -1.18
UBC11YOR339C YRF1-7P0CX15 1859 aa7.66□□□□□ -1.18
UBC11YOR339C YRF1-6P53819 1859 aa7.66□□□□□ -1.18
UBC11YOR339C YIL055CP40523 627 aaKnown RBP7.65□□□□□ -1.18
UBC11YOR339C TCB1Q12466 1186 aa7.65□□□□□ -1.18
UBC11YOR339C GRX4P32642 244 aa7.64□□□□□ -1.19
UBC11YOR339C IMH1Q06704 911 aaKnown RBP7.64□□□□□ -1.19
UBC11YOR339C KAR2P16474 682 aaKnown RBP7.63□□□□□ -1.19
UBC11YOR339C RSF2P46974 1380 aa7.62□□□□□ -1.19
UBC11YOR339C MRPL32P25348 183 aa7.61□□□□□ -1.19
UBC11YOR339C IES2P40154 320 aa7.61□□□□□ -1.19
UBC11YOR339C XKS1P42826 600 aa7.61□□□□□ -1.19
UBC11YOR339C SNF2P22082 1703 aa7.6□□□□□ -1.19
UBC11YOR339C PAP2P53632 584 aaKnown RBP7.59□□□□□ -1.19
UBC11YOR339C GLN1P32288 370 aaKnown RBP7.58□□□□□ -1.2
UBC11YOR339C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.58□□□□□ -1.2not detected
UBC11YOR339C RPO41P13433 1351 aaKnown RBP7.58□□□□□ -1.2
UBC11YOR339C ENP1P38333 483 aaKnown RBP7.57□□□□□ -1.2
UBC11YOR339C RCR1P38212 213 aa7.56□□□□□ -1.2
UBC11YOR339C RRP46P53256 223 aaPredicted RBP7.56□□□□□ -1.2
UBC11YOR339C DOT5P40553 215 aa7.55□□□□□ -1.2
UBC11YOR339C YKL133CP36066 463 aa7.54□□□□□ -1.2
UBC11YOR339C YMR074CQ04773 145 aa7.54□□□□□ -1.2
UBC11YOR339C SIR4P11978 1358 aa7.54□□□□□ -1.2
UBC11YOR339C ROM2P51862 1356 aaKnown RBP7.54□□□□□ -1.2
UBC11YOR339C DSD1P53095 428 aa7.53□□□□□ -1.2
UBC11YOR339C IOC4Q04213 475 aa7.53□□□□□ -1.2
UBC11YOR339C AKL1P38080 1108 aaKnown RBP7.52□□□□□ -1.21
UBC11YOR339C FOX2Q02207 900 aaKnown RBP7.52□□□□□ -1.21
UBC11YOR339C YRF1-4O13559 1382 aa7.51□□□□□ -1.21
UBC11YOR339C HSP104P31539 908 aaKnown RBP7.51□□□□□ -1.21
UBC11YOR339C RTR1P40084 226 aaPredicted RBP7.51□□□□□ -1.21
UBC11YOR339C RIM15P43565 1770 aa7.51□□□□□ -1.21
UBC11YOR339C COBP00163 385 aa7.5□□□□□ -1.21
UBC11YOR339C RPN11P43588 306 aaKnown RBP7.5□□□□□ -1.21
UBC11YOR339C ADE16P54113 591 aaKnown RBP7.5□□□□□ -1.21
UBC11YOR339C MEC3Q02574 474 aa7.5□□□□□ -1.21
UBC11YOR339C MPP10P47083 593 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms