RNA–Protein interactions for RNA: YOR140W

SFL1, Transcript of Transcriptional repressor and activator, yeastyeast

Gene SFL1, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFL1YOR140W NOP2P40991 618 aaKnown RBP11.29□□□□□ -0.6
SFL1YOR140W RCM1P53972 490 aa11.27□□□□□ -0.6
SFL1YOR140W PPH3P32345 308 aa11.26□□□□□ -0.61
SFL1YOR140W YML133CQ03099 1374 aa11.24□□□□□ -0.61
SFL1YOR140W YLL067CQ07888 1374 aa11.24□□□□□ -0.61
SFL1YOR140W YLL066CQ99208 1374 aa11.24□□□□□ -0.61
SFL1YOR140W FKH1P40466 484 aa11.23□□□□□ -0.61
SFL1YOR140W YNR029CP53729 429 aaKnown RBP11.23□□□□□ -0.61
SFL1YOR140W NAP1P25293 417 aaKnown RBP11.22□□□□□ -0.61
SFL1YOR140W TY1B-NL2Q99337 1749 aaKnown RBP11.17□□□□□ -0.62
SFL1YOR140W YEF3P16521 1044 aaKnown RBP11.17□□□□□ -0.62
SFL1YOR140W TRK1P12685 1235 aa11.16□□□□□ -0.62
SFL1YOR140W CPS1P27614 576 aa11.16□□□□□ -0.62
SFL1YOR140W PRS1P32895 427 aaKnown RBP11.15□□□□□ -0.62
SFL1YOR140W PSK1P31374 1356 aa11.14□□□□□ -0.63
SFL1YOR140W THI12P42883 340 aa11.13□□□□□ -0.63
SFL1YOR140W THI5P43534 340 aa11.13□□□□□ -0.63
SFL1YOR140W THI11P47183 340 aa11.13□□□□□ -0.63
SFL1YOR140W THI13Q07748 340 aa11.13□□□□□ -0.63
SFL1YOR140W SCT1P32784 759 aa11.11□□□□□ -0.63
SFL1YOR140W MIF2P35201 549 aa11.07□□□□□ -0.64
SFL1YOR140W LEU2P04173 364 aaPredicted RBP11.07□□□□□ -0.64
SFL1YOR140W TFA1P36100 482 aa11.07□□□□□ -0.64
SFL1YOR140W YMR196WQ04336 1088 aa11.06□□□□□ -0.64
SFL1YOR140W HIM1Q06674 414 aa11.06□□□□□ -0.64
SFL1YOR140W TY4B-HP0C2J7 1802 aa11.06□□□□□ -0.64
SFL1YOR140W TY4B-JP47024 1803 aa11.06□□□□□ -0.64
SFL1YOR140W RPS24AP0CX31 135 aaKnown RBP11.04□□□□□ -0.64
SFL1YOR140W RPS24BP0CX32 135 aaKnown RBP11.04□□□□□ -0.64
SFL1YOR140W RRP46P53256 223 aaPredicted RBP11.03□□□□□ -0.64
SFL1YOR140W AUS1Q08409 1394 aa11.02□□□□□ -0.64
SFL1YOR140W YFR016CP43597 1233 aaKnown RBP11.01□□□□□ -0.65
SFL1YOR140W CSE4P36012 229 aa11.01□□□□□ -0.65
SFL1YOR140W MTR4P47047 1073 aaKnown RBP11.01□□□□□ -0.65
SFL1YOR140W ADE6P38972 1358 aaKnown RBP11□□□□□ -0.65
SFL1YOR140W YIL177CP40434 1758 aa11□□□□□ -0.65
SFL1YOR140W YJL225CP40889 1758 aa11□□□□□ -0.65
SFL1YOR140W FUN12P39730 1002 aaKnown RBP11□□□□□ -0.65
SFL1YOR140W AVT3P36062 692 aa11□□□□□ -0.65
SFL1YOR140W GAS4Q08271 471 aa11□□□□□ -0.65
SFL1YOR140W PDI1P17967 522 aaKnown RBP10.98□□□□□ -0.65
SFL1YOR140W KAR2P16474 682 aaKnown RBP10.98□□□□□ -0.65
SFL1YOR140W SNF2P22082 1703 aa10.98□□□□□ -0.65
SFL1YOR140W TAP42Q04372 366 aa10.97□□□□□ -0.65
SFL1YOR140W YDL144CQ07589 356 aa10.97□□□□□ -0.65
SFL1YOR140W MPP10P47083 593 aaKnown RBP10.97□□□□□ -0.65
SFL1YOR140W PRP43P53131 767 aaKnown RBP10.95□□□□□ -0.66
SFL1YOR140W PAP2P53632 584 aaKnown RBP10.94□□□□□ -0.66
SFL1YOR140W DPS1P04802 557 aaKnown RBP10.93□□□□□ -0.66
SFL1YOR140W RTF1P53064 558 aa10.92□□□□□ -0.66
SFL1YOR140W RVB2Q12464 471 aaKnown RBP10.92□□□□□ -0.66
SFL1YOR140W RRP5Q05022 1729 aaKnown RBP10.92□□□□□ -0.66
SFL1YOR140W RTR1P40084 226 aaPredicted RBP10.91□□□□□ -0.66
SFL1YOR140W SUI2P20459 304 aaKnown RBP10.91□□□□□ -0.66
SFL1YOR140W VPS27P40343 622 aaKnown RBP10.9□□□□□ -0.66
SFL1YOR140W GRX4P32642 244 aa10.9□□□□□ -0.67
SFL1YOR140W BUB1P41695 1021 aaKnown RBP RIP-Chip data10.89□□□□□ -0.67not detected
SFL1YOR140W IOC4Q04213 475 aa10.88□□□□□ -0.67
SFL1YOR140W PRP45P28004 379 aaPredicted RBP10.87□□□□□ -0.67
SFL1YOR140W THI22Q06490 572 aa10.87□□□□□ -0.67
SFL1YOR140W PRD1P25375 712 aa10.87□□□□□ -0.67
SFL1YOR140W CDC45Q08032 650 aa10.87□□□□□ -0.67
SFL1YOR140W RPP0P05317 312 aaKnown RBP10.86□□□□□ -0.67
SFL1YOR140W YRF1-2P40105 1681 aa10.86□□□□□ -0.67
SFL1YOR140W PTP3P40048 928 aa10.86□□□□□ -0.67
SFL1YOR140W YFR006WP43590 535 aa10.86□□□□□ -0.67
SFL1YOR140W SAP155P43612 1002 aa10.85□□□□□ -0.67
SFL1YOR140W MSB3P48566 633 aaPredicted RBP10.85□□□□□ -0.67
SFL1YOR140W URB1P34241 1764 aaKnown RBP10.85□□□□□ -0.67
SFL1YOR140W PRP5P21372 849 aaPredicted RBP10.85□□□□□ -0.67
SFL1YOR140W APC1P53886 1748 aa10.84□□□□□ -0.67
SFL1YOR140W RPO41P13433 1351 aaKnown RBP10.83□□□□□ -0.68
SFL1YOR140W TPD3P31383 635 aa10.83□□□□□ -0.68
SFL1YOR140W FKS3Q04952 1785 aa10.82□□□□□ -0.68
SFL1YOR140W RTT109Q07794 436 aa10.81□□□□□ -0.68
SFL1YOR140W AKL1P38080 1108 aaKnown RBP10.8□□□□□ -0.68
SFL1YOR140W HEF3P53978 1044 aaKnown RBP10.8□□□□□ -0.68
SFL1YOR140W SLM3Q12093 417 aa10.79□□□□□ -0.68
SFL1YOR140W YRF1-4O13559 1382 aa10.79□□□□□ -0.68
SFL1YOR140W DSD1P53095 428 aa10.76□□□□□ -0.69
SFL1YOR140W RPS0BP46654 252 aaKnown RBP10.76□□□□□ -0.69
SFL1YOR140W REB1P21538 810 aa10.75□□□□□ -0.69
SFL1YOR140W APP1P53933 587 aa10.75□□□□□ -0.69
SFL1YOR140W HSP104P31539 908 aaKnown RBP10.74□□□□□ -0.69
SFL1YOR140W ENT1Q12518 454 aa10.74□□□□□ -0.69
SFL1YOR140W XKS1P42826 600 aa10.73□□□□□ -0.69
SFL1YOR140W NAB6Q03735 1134 aaKnown RBP RIP-Chip data10.73□□□□□ -0.69not detected
SFL1YOR140W NTH2P35172 780 aa10.72□□□□□ -0.69
SFL1YOR140W YRF1-3P0CX14 1859 aa10.72□□□□□ -0.69
SFL1YOR140W YRF1-7P0CX15 1859 aa10.72□□□□□ -0.69
SFL1YOR140W YRF1-6P53819 1859 aa10.72□□□□□ -0.69
SFL1YOR140W TCB1Q12466 1186 aa10.72□□□□□ -0.69
SFL1YOR140W DAL5P15365 543 aa10.71□□□□□ -0.69
SFL1YOR140W RCR1P38212 213 aa10.71□□□□□ -0.69
SFL1YOR140W YRB30P53107 440 aaPredicted RBP10.7□□□□□ -0.7
SFL1YOR140W DIP2Q12220 943 aaPredicted RBP10.7□□□□□ -0.7
SFL1YOR140W YBR287WP38355 427 aa10.69□□□□□ -0.7
SFL1YOR140W YIL092WP40497 633 aa10.69□□□□□ -0.7
SFL1YOR140W RRT14P40470 206 aa10.68□□□□□ -0.7
SFL1YOR140W KRI1P42846 591 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms