RNA–Protein interactions for RNA: YOR039W

CKB2, Transcript of Beta' regulatory subunit of casein kinase 2 (CK2), yeastyeast

Gene CKB2, Length 777 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKB2YOR039W BNI4P53858 892 aa8.41□□□□□ -1.06
CKB2YOR039W SSK2P53599 1579 aa8.4□□□□□ -1.06
CKB2YOR039W SPT23P35210 1082 aa8.4□□□□□ -1.06
CKB2YOR039W YDR344CQ05510 147 aa8.39□□□□□ -1.07
CKB2YOR039W TUM1Q08686 304 aaKnown RBP8.38□□□□□ -1.07
CKB2YOR039W TEA1P47988 759 aa8.37□□□□□ -1.07
CKB2YOR039W YPR109WQ06104 294 aa8.37□□□□□ -1.07
CKB2YOR039W YRR1Q12172 810 aa8.36□□□□□ -1.07
CKB2YOR039W ESP1Q03018 1630 aa8.35□□□□□ -1.07
CKB2YOR039W PTC2P39966 464 aaKnown RBP8.34□□□□□ -1.07
CKB2YOR039W KIN1P13185 1064 aa8.33□□□□□ -1.08
CKB2YOR039W YCF1P39109 1515 aaKnown RBP8.33□□□□□ -1.08
CKB2YOR039W UFD4P33202 1483 aa8.32□□□□□ -1.08
CKB2YOR039W MYO2P19524 1574 aaKnown RBP8.31□□□□□ -1.08
CKB2YOR039W YML082WQ04533 649 aaKnown RBP8.31□□□□□ -1.08
CKB2YOR039W YPK9Q12697 1472 aa8.31□□□□□ -1.08
CKB2YOR039W PDR1P12383 1068 aa8.28□□□□□ -1.08
CKB2YOR039W NUD1P32336 851 aa8.28□□□□□ -1.08
CKB2YOR039W RAM1P22007 431 aa8.26□□□□□ -1.09
CKB2YOR039W NPL4P33755 580 aa8.26□□□□□ -1.09
CKB2YOR039W SCC2Q04002 1493 aa8.26□□□□□ -1.09
CKB2YOR039W NIS1P53939 407 aa8.25□□□□□ -1.09
CKB2YOR039W RPO31P04051 1460 aa8.24□□□□□ -1.09
CKB2YOR039W SIT4P20604 311 aa8.23□□□□□ -1.09
CKB2YOR039W YMR196WQ04336 1088 aa8.23□□□□□ -1.09
CKB2YOR039W RTF1P53064 558 aa8.22□□□□□ -1.09
CKB2YOR039W STR2P47164 639 aa8.21□□□□□ -1.1
CKB2YOR039W FPK1P53739 893 aa8.21□□□□□ -1.1
CKB2YOR039W YPR015CQ12531 247 aa8.21□□□□□ -1.1
CKB2YOR039W ISM1P48526 1002 aa8.2□□□□□ -1.1
CKB2YOR039W HST2P53686 357 aa8.2□□□□□ -1.1
CKB2YOR039W CHD1P32657 1468 aa8.19□□□□□ -1.1
CKB2YOR039W SSA2P10592 639 aaKnown RBP8.19□□□□□ -1.1
CKB2YOR039W BCK2P33306 851 aa8.19□□□□□ -1.1
CKB2YOR039W VRP1P37370 817 aa8.18□□□□□ -1.1
CKB2YOR039W CSN12P47130 423 aa8.18□□□□□ -1.1
CKB2YOR039W GLN1P32288 370 aaKnown RBP8.17□□□□□ -1.1
CKB2YOR039W YNL115CP53925 644 aa8.17□□□□□ -1.1
CKB2YOR039W MET5P47169 1442 aa8.16□□□□□ -1.1
CKB2YOR039W SAS4Q04003 481 aa8.16□□□□□ -1.1
CKB2YOR039W BUD20Q08004 166 aaPredicted RBP8.16□□□□□ -1.1
CKB2YOR039W PRT1P06103 763 aaKnown RBP8.15□□□□□ -1.1
CKB2YOR039W KEX2P13134 814 aa8.15□□□□□ -1.1
CKB2YOR039W GUA1P38625 525 aaKnown RBP8.15□□□□□ -1.1
CKB2YOR039W CDC25P04821 1589 aa8.14□□□□□ -1.11
CKB2YOR039W TOP2P06786 1428 aaKnown RBP8.14□□□□□ -1.11
CKB2YOR039W GCD11P32481 527 aaKnown RBP8.14□□□□□ -1.11
CKB2YOR039W MMP1Q12372 583 aa8.14□□□□□ -1.11
CKB2YOR039W HPC2Q01448 625 aa8.13□□□□□ -1.11
CKB2YOR039W TY1A-DR4O74302 440 aa8.12□□□□□ -1.11
CKB2YOR039W TY1A-HP0C2I4 478 aaKnown RBP8.12□□□□□ -1.11
CKB2YOR039W TY1A-AP0CX57 440 aa8.12□□□□□ -1.11
CKB2YOR039W TY1A-PR1P0CX58 440 aa8.12□□□□□ -1.11
CKB2YOR039W TY1A-ORP0CX59 440 aa8.12□□□□□ -1.11
CKB2YOR039W TY1A-PR2P0CX60 440 aa8.12□□□□□ -1.11
CKB2YOR039W TY1A-DR5P0CX65 440 aa8.12□□□□□ -1.11
CKB2YOR039W TY1A-ER2P0CX66 440 aa8.12□□□□□ -1.11
CKB2YOR039W TY1A-GR3P0CX67 440 aa8.12□□□□□ -1.11
CKB2YOR039W TY1A-LR1P0CX68 440 aa8.12□□□□□ -1.11
CKB2YOR039W TY1A-MR2P0CX69 440 aa8.12□□□□□ -1.11
CKB2YOR039W TY1A-JR2P47099 440 aa8.12□□□□□ -1.11
CKB2YOR039W TY1A-DR1Q03856 440 aa8.12□□□□□ -1.11
CKB2YOR039W TY1A-ML1Q04706 440 aaKnown RBP8.12□□□□□ -1.11
CKB2YOR039W GYP1Q08484 637 aa8.12□□□□□ -1.11
CKB2YOR039W TY1A-BRQ12217 440 aa8.12□□□□□ -1.11
CKB2YOR039W TY1A-NL2Q12470 440 aa8.12□□□□□ -1.11
CKB2YOR039W TY1A-GR2Q12485 440 aa8.12□□□□□ -1.11
CKB2YOR039W PAN1P32521 1480 aa8.12□□□□□ -1.11
CKB2YOR039W SEC2P17065 759 aa8.1□□□□□ -1.11
CKB2YOR039W SLY41P22215 453 aa8.1□□□□□ -1.11
CKB2YOR039W KTR1P27810 393 aaKnown RBP8.1□□□□□ -1.11
CKB2YOR039W HGH1P48362 394 aaKnown RBP8.1□□□□□ -1.11
CKB2YOR039W ERF2Q06551 359 aa8.1□□□□□ -1.11
CKB2YOR039W XDJ1P39102 459 aa8.09□□□□□ -1.11
CKB2YOR039W TYW1Q08960 810 aaKnown RBP8.09□□□□□ -1.11
CKB2YOR039W SCJ1P25303 377 aa8.08□□□□□ -1.12
CKB2YOR039W PAT1P25644 796 aaKnown RBP8.08□□□□□ -1.12
CKB2YOR039W POL1P13382 1468 aa8.07□□□□□ -1.12
CKB2YOR039W LTE1P07866 1435 aa8.07□□□□□ -1.12
CKB2YOR039W ESS1P22696 170 aa8.07□□□□□ -1.12
CKB2YOR039W BRL1P38770 471 aa8.06□□□□□ -1.12
CKB2YOR039W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.06□□□□□ -1.12not detected
CKB2YOR039W MMS22Q06164 1454 aa8.06□□□□□ -1.12
CKB2YOR039W RKR1Q04781 1562 aa8.05□□□□□ -1.12
CKB2YOR039W ESC1Q03661 1658 aaKnown RBP8.05□□□□□ -1.12
CKB2YOR039W TRM732Q03496 1420 aa8.05□□□□□ -1.12
CKB2YOR039W MRF1P30775 413 aaPredicted RBP8.05□□□□□ -1.12
CKB2YOR039W TUB4P53378 473 aa8.05□□□□□ -1.12
CKB2YOR039W PKH3Q03306 898 aaPredicted RBP8.05□□□□□ -1.12
CKB2YOR039W AGE1Q04412 482 aa8.05□□□□□ -1.12
CKB2YOR039W LAM6Q08001 693 aa8.05□□□□□ -1.12
CKB2YOR039W DNF1P32660 1571 aa8.05□□□□□ -1.12
CKB2YOR039W TY2B-LR1P0C2J3 1770 aa8.05□□□□□ -1.12
CKB2YOR039W TY2B-FP0CX63 1770 aa8.05□□□□□ -1.12
CKB2YOR039W TY2B-GR2P0CX64 1770 aa8.05□□□□□ -1.12
CKB2YOR039W TY2B-CP25384 1770 aa8.05□□□□□ -1.12
CKB2YOR039W TY2B-DR2Q03494 1770 aa8.05□□□□□ -1.12
CKB2YOR039W TY1B-DR1Q03855 1755 aa8.05□□□□□ -1.12
CKB2YOR039W TY2B-DR3Q07791 1770 aaKnown RBP8.05□□□□□ -1.12
CKB2YOR039W TY2B-OR1Q12113 1770 aa8.05□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms