RNA–Protein interactions for RNA: YNL004W

HRB1, Transcript of Poly(A+) RNA-binding protein, yeastyeast

Gene HRB1, Length 1,365 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRB1YNL004W SCT1P32784 759 aa9.9□□□□□ -0.82
HRB1YNL004W TY3B-IQ7LHG5 1498 aaKnown RBP9.89□□□□□ -0.83
HRB1YNL004W PPH3P32345 308 aa9.88□□□□□ -0.83
HRB1YNL004W PTP3P40048 928 aa9.88□□□□□ -0.83
HRB1YNL004W FAP1P53971 965 aa9.88□□□□□ -0.83
HRB1YNL004W YLR419WQ06698 1435 aaKnown RBP9.84□□□□□ -0.83
HRB1YNL004W APP1P53933 587 aa9.81□□□□□ -0.84
HRB1YNL004W YAH1Q12184 172 aaKnown RBP9.81□□□□□ -0.84
HRB1YNL004W PSK1P31374 1356 aa9.8□□□□□ -0.84
HRB1YNL004W LEU2P04173 364 aaPredicted RBP9.8□□□□□ -0.84
HRB1YNL004W PRP45P28004 379 aaPredicted RBP9.79□□□□□ -0.84
HRB1YNL004W ENT1Q12518 454 aa9.77□□□□□ -0.84
HRB1YNL004W REB1P21538 810 aa9.75□□□□□ -0.85
HRB1YNL004W CSE4P36012 229 aa9.75□□□□□ -0.85
HRB1YNL004W RTG3P38165 486 aa9.75□□□□□ -0.85
HRB1YNL004W MTR4P47047 1073 aaKnown RBP9.75□□□□□ -0.85
HRB1YNL004W PDS5Q04264 1277 aa9.75□□□□□ -0.85
HRB1YNL004W PRP5P21372 849 aaPredicted RBP9.75□□□□□ -0.85
HRB1YNL004W FKH1P40466 484 aa9.75□□□□□ -0.85
HRB1YNL004W MHP1P43638 1398 aa9.73□□□□□ -0.85
HRB1YNL004W RPS24AP0CX31 135 aaKnown RBP9.73□□□□□ -0.85
HRB1YNL004W RPS24BP0CX32 135 aaKnown RBP9.73□□□□□ -0.85
HRB1YNL004W RPG1P38249 964 aaKnown RBP9.73□□□□□ -0.85
HRB1YNL004W ENV9Q08651 330 aa9.73□□□□□ -0.85
HRB1YNL004W PRP43P53131 767 aaKnown RBP9.71□□□□□ -0.86
HRB1YNL004W ADE6P38972 1358 aaKnown RBP9.71□□□□□ -0.86
HRB1YNL004W YIL055CP40523 627 aaKnown RBP9.68□□□□□ -0.86
HRB1YNL004W YML133CQ03099 1374 aa9.67□□□□□ -0.86
HRB1YNL004W YLL067CQ07888 1374 aa9.67□□□□□ -0.86
HRB1YNL004W YLL066CQ99208 1374 aa9.67□□□□□ -0.86
HRB1YNL004W PRI1P10363 409 aa9.67□□□□□ -0.86
HRB1YNL004W MSB3P48566 633 aaPredicted RBP9.67□□□□□ -0.86
HRB1YNL004W RTF1P53064 558 aa9.66□□□□□ -0.86
HRB1YNL004W PDI1P17967 522 aaKnown RBP9.65□□□□□ -0.86
HRB1YNL004W GAS4Q08271 471 aa9.65□□□□□ -0.86
HRB1YNL004W IMH1Q06704 911 aaKnown RBP9.64□□□□□ -0.87
HRB1YNL004W SLM3Q12093 417 aa9.63□□□□□ -0.87
HRB1YNL004W TCB1Q12466 1186 aa9.63□□□□□ -0.87
HRB1YNL004W DPS1P04802 557 aaKnown RBP9.63□□□□□ -0.87
HRB1YNL004W PSD2P53037 1138 aaKnown RBP9.62□□□□□ -0.87
HRB1YNL004W LEU3P08638 886 aa9.6□□□□□ -0.87
HRB1YNL004W GLN1P32288 370 aaKnown RBP9.6□□□□□ -0.87
HRB1YNL004W TAP42Q04372 366 aa9.6□□□□□ -0.87
HRB1YNL004W HIM1Q06674 414 aa9.6□□□□□ -0.87
HRB1YNL004W GRX4P32642 244 aa9.59□□□□□ -0.87
HRB1YNL004W ENP1P38333 483 aaKnown RBP9.59□□□□□ -0.87
HRB1YNL004W IES2P40154 320 aa9.59□□□□□ -0.87
HRB1YNL004W NST1P53935 1240 aa9.59□□□□□ -0.87
HRB1YNL004W RRP5Q05022 1729 aaKnown RBP9.57□□□□□ -0.88
HRB1YNL004W KAR2P16474 682 aaKnown RBP9.57□□□□□ -0.88
HRB1YNL004W XKS1P42826 600 aa9.57□□□□□ -0.88
HRB1YNL004W SEC3P33332 1336 aaKnown RBP9.57□□□□□ -0.88
HRB1YNL004W SPT7P35177 1332 aa9.56□□□□□ -0.88
HRB1YNL004W YEF3P16521 1044 aaKnown RBP9.55□□□□□ -0.88
HRB1YNL004W TY4B-HP0C2J7 1802 aa9.55□□□□□ -0.88
HRB1YNL004W TY4B-JP47024 1803 aa9.55□□□□□ -0.88
HRB1YNL004W PAP2P53632 584 aaKnown RBP9.54□□□□□ -0.88
HRB1YNL004W MLP1Q02455 1875 aaKnown RBP9.54□□□□□ -0.88
HRB1YNL004W TRK1P12685 1235 aa9.53□□□□□ -0.88
HRB1YNL004W YMR074CQ04773 145 aa9.53□□□□□ -0.88
HRB1YNL004W RSF2P46974 1380 aa9.53□□□□□ -0.88
HRB1YNL004W AUS1Q08409 1394 aa9.53□□□□□ -0.88
HRB1YNL004W RPL17AP05740 184 aaKnown RBP9.51□□□□□ -0.89
HRB1YNL004W RPL17BP46990 184 aaKnown RBP9.51□□□□□ -0.89
HRB1YNL004W YKL133CP36066 463 aa9.5□□□□□ -0.89
HRB1YNL004W DOT5P40553 215 aa9.5□□□□□ -0.89
HRB1YNL004W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.5□□□□□ -0.89not detected
HRB1YNL004W RCR1P38212 213 aa9.5□□□□□ -0.89
HRB1YNL004W AAD16Q02895 342 aa9.48□□□□□ -0.89
HRB1YNL004W MEC3Q02574 474 aa9.47□□□□□ -0.89
HRB1YNL004W YRF1-2P40105 1681 aa9.47□□□□□ -0.89
HRB1YNL004W RPN11P43588 306 aaKnown RBP9.46□□□□□ -0.9
HRB1YNL004W FOX2Q02207 900 aaKnown RBP9.46□□□□□ -0.9
HRB1YNL004W RPO41P13433 1351 aaKnown RBP9.45□□□□□ -0.9
HRB1YNL004W ROM2P51862 1356 aaKnown RBP9.45□□□□□ -0.9
HRB1YNL004W COBP00163 385 aa9.45□□□□□ -0.9
HRB1YNL004W YJL181WP46987 611 aa9.45□□□□□ -0.9
HRB1YNL004W DSD1P53095 428 aa9.44□□□□□ -0.9
HRB1YNL004W HSP104P31539 908 aaKnown RBP9.43□□□□□ -0.9
HRB1YNL004W LAM6Q08001 693 aa9.43□□□□□ -0.9
HRB1YNL004W UBP1P25037 809 aa9.42□□□□□ -0.9
HRB1YNL004W BUD31P25337 157 aaPredicted RBP9.42□□□□□ -0.9
HRB1YNL004W AKL1P38080 1108 aaKnown RBP9.42□□□□□ -0.9
HRB1YNL004W ADE16P54113 591 aaKnown RBP9.42□□□□□ -0.9
HRB1YNL004W FRK1Q03002 865 aaPredicted RBP9.42□□□□□ -0.9
HRB1YNL004W RTR1P40084 226 aaPredicted RBP9.41□□□□□ -0.9
HRB1YNL004W RRP46P53256 223 aaPredicted RBP9.41□□□□□ -0.9
HRB1YNL004W PRP40P33203 583 aaKnown RBP9.4□□□□□ -0.9
HRB1YNL004W ATG13Q06628 738 aa9.4□□□□□ -0.9
HRB1YNL004W YRF1-4O13559 1382 aa9.4□□□□□ -0.9
HRB1YNL004W SIR4P11978 1358 aa9.4□□□□□ -0.9
HRB1YNL004W CTF4Q01454 927 aa9.38□□□□□ -0.91
HRB1YNL004W OSM1P21375 501 aaKnown RBP9.37□□□□□ -0.91
HRB1YNL004W YKR075CP36155 307 aa9.37□□□□□ -0.91
HRB1YNL004W INP54Q08227 384 aaKnown RBP9.37□□□□□ -0.91
HRB1YNL004W URB1P34241 1764 aaKnown RBP9.37□□□□□ -0.91
HRB1YNL004W YIL177CP40434 1758 aa9.37□□□□□ -0.91
HRB1YNL004W YJL225CP40889 1758 aa9.37□□□□□ -0.91
HRB1YNL004W NPR2P39923 615 aa9.37□□□□□ -0.91
HRB1YNL004W IOC4Q04213 475 aa9.37□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms