RNA–Protein interactions for RNA: YMR298W

LIP1, Transcript of Ceramide synthase subunit, yeastyeast

Gene LIP1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIP1YMR298W BCK1Q01389 1478 aa12.74□□□□□ -0.37
LIP1YMR298W RAD9P14737 1309 aa12.71□□□□□ -0.37
LIP1YMR298W MAK10Q02197 733 aa12.7□□□□□ -0.38
LIP1YMR298W SPE2P21182 396 aa12.69□□□□□ -0.38
LIP1YMR298W NAP1P25293 417 aaKnown RBP12.69□□□□□ -0.38
LIP1YMR298W MAP2P38174 421 aaKnown RBP12.68□□□□□ -0.38
LIP1YMR298W TAF8Q03750 510 aa12.68□□□□□ -0.38
LIP1YMR298W SPT7P35177 1332 aa12.67□□□□□ -0.38
LIP1YMR298W CAB1Q04430 367 aa12.67□□□□□ -0.38
LIP1YMR298W TFA1P36100 482 aa12.66□□□□□ -0.38
LIP1YMR298W ENP1P38333 483 aaKnown RBP12.65□□□□□ -0.38
LIP1YMR298W MRX12P47084 519 aa12.65□□□□□ -0.38
LIP1YMR298W UBP10P53874 792 aaPredicted RBP12.65□□□□□ -0.38
LIP1YMR298W PDS5Q04264 1277 aa12.63□□□□□ -0.39
LIP1YMR298W KRE5P22023 1365 aa12.61□□□□□ -0.39
LIP1YMR298W NSR1P27476 414 aaKnown RBP RIP-Chip data12.61□□□□□ -0.39not detected
LIP1YMR298W CFT1Q06632 1357 aaKnown RBP12.6□□□□□ -0.39
LIP1YMR298W RIA1P53893 1110 aa12.58□□□□□ -0.4
LIP1YMR298W PSD2P53037 1138 aaKnown RBP12.57□□□□□ -0.4
LIP1YMR298W TY1B-NL2Q99337 1749 aaKnown RBP12.56□□□□□ -0.4
LIP1YMR298W CHZ1P40019 153 aaPredicted RBP12.55□□□□□ -0.4
LIP1YMR298W MLP1Q02455 1875 aaKnown RBP12.51□□□□□ -0.41
LIP1YMR298W LEU3P08638 886 aa12.49□□□□□ -0.41
LIP1YMR298W FKH1P40466 484 aa12.49□□□□□ -0.41
LIP1YMR298W YNR029CP53729 429 aaKnown RBP12.48□□□□□ -0.41
LIP1YMR298W USO1P25386 1790 aa12.48□□□□□ -0.41
LIP1YMR298W RTG3P38165 486 aa12.47□□□□□ -0.41
LIP1YMR298W SCY1P53009 804 aa12.47□□□□□ -0.41
LIP1YMR298W PSK1P31374 1356 aa12.46□□□□□ -0.41
LIP1YMR298W OXP1P28273 1286 aa12.45□□□□□ -0.42
LIP1YMR298W RCM1P53972 490 aa12.45□□□□□ -0.42
LIP1YMR298W YMR196WQ04336 1088 aa12.44□□□□□ -0.42
LIP1YMR298W BCH2P36122 765 aa12.43□□□□□ -0.42
LIP1YMR298W PPH3P32345 308 aa12.41□□□□□ -0.42
LIP1YMR298W NST1P53935 1240 aa12.41□□□□□ -0.42
LIP1YMR298W YML133CQ03099 1374 aa12.41□□□□□ -0.42
LIP1YMR298W YLL067CQ07888 1374 aa12.41□□□□□ -0.42
LIP1YMR298W YLL066CQ99208 1374 aa12.41□□□□□ -0.42
LIP1YMR298W CPS1P27614 576 aa12.4□□□□□ -0.42
LIP1YMR298W MIF2P35201 549 aa12.4□□□□□ -0.42
LIP1YMR298W LEU2P04173 364 aaPredicted RBP12.35□□□□□ -0.43
LIP1YMR298W MTR4P47047 1073 aaKnown RBP12.33□□□□□ -0.44
LIP1YMR298W IOC4Q04213 475 aa12.33□□□□□ -0.44
LIP1YMR298W PRS1P32895 427 aaKnown RBP12.32□□□□□ -0.44
LIP1YMR298W THI12P42883 340 aa12.32□□□□□ -0.44
LIP1YMR298W THI5P43534 340 aa12.32□□□□□ -0.44
LIP1YMR298W THI11P47183 340 aa12.32□□□□□ -0.44
LIP1YMR298W THI13Q07748 340 aa12.32□□□□□ -0.44
LIP1YMR298W YEF3P16521 1044 aaKnown RBP12.31□□□□□ -0.44
LIP1YMR298W PDI1P17967 522 aaKnown RBP12.29□□□□□ -0.44
LIP1YMR298W PTP3P40048 928 aa12.29□□□□□ -0.44
LIP1YMR298W YIL055CP40523 627 aaKnown RBP12.29□□□□□ -0.44
LIP1YMR298W TAP42Q04372 366 aa12.29□□□□□ -0.44
LIP1YMR298W ADE6P38972 1358 aaKnown RBP12.28□□□□□ -0.44
LIP1YMR298W TRK1P12685 1235 aa12.27□□□□□ -0.45
LIP1YMR298W SLX5P32828 619 aaKnown RBP12.27□□□□□ -0.45
LIP1YMR298W RTF1P53064 558 aa12.26□□□□□ -0.45
LIP1YMR298W PRP43P53131 767 aaKnown RBP12.25□□□□□ -0.45
LIP1YMR298W RPP0P05317 312 aaKnown RBP12.24□□□□□ -0.45
LIP1YMR298W KAR2P16474 682 aaKnown RBP12.24□□□□□ -0.45
LIP1YMR298W GRX4P32642 244 aa12.24□□□□□ -0.45
LIP1YMR298W CSE4P36012 229 aa12.22□□□□□ -0.45
LIP1YMR298W AUS1Q08409 1394 aa12.19□□□□□ -0.46
LIP1YMR298W RPS24AP0CX31 135 aaKnown RBP12.19□□□□□ -0.46
LIP1YMR298W RPS24BP0CX32 135 aaKnown RBP12.19□□□□□ -0.46
LIP1YMR298W SNF2P22082 1703 aa12.19□□□□□ -0.46
LIP1YMR298W VPS27P40343 622 aaKnown RBP12.18□□□□□ -0.46
LIP1YMR298W HIM1Q06674 414 aa12.18□□□□□ -0.46
LIP1YMR298W YAH1Q12184 172 aaKnown RBP12.18□□□□□ -0.46
LIP1YMR298W CDC45Q08032 650 aa12.17□□□□□ -0.46
LIP1YMR298W YDL144CQ07589 356 aa12.16□□□□□ -0.46
LIP1YMR298W TY4B-HP0C2J7 1802 aa12.16□□□□□ -0.46
LIP1YMR298W TY4B-JP47024 1803 aa12.16□□□□□ -0.46
LIP1YMR298W TIF4632P39936 914 aaKnown RBP12.15□□□□□ -0.46
LIP1YMR298W EPS1P40557 701 aa12.14□□□□□ -0.47
LIP1YMR298W RRP46P53256 223 aaPredicted RBP12.14□□□□□ -0.47
LIP1YMR298W PAP2P53632 584 aaKnown RBP12.14□□□□□ -0.47
LIP1YMR298W RTR1P40084 226 aaPredicted RBP12.13□□□□□ -0.47
LIP1YMR298W NOP2P40991 618 aaKnown RBP12.13□□□□□ -0.47
LIP1YMR298W GAS4Q08271 471 aa12.13□□□□□ -0.47
LIP1YMR298W DPS1P04802 557 aaKnown RBP12.12□□□□□ -0.47
LIP1YMR298W RPO41P13433 1351 aaKnown RBP12.12□□□□□ -0.47
LIP1YMR298W MPP10P47083 593 aaKnown RBP12.1□□□□□ -0.47
LIP1YMR298W BDF1P35817 686 aa12.08□□□□□ -0.48
LIP1YMR298W RSM7P47150 247 aa12.08□□□□□ -0.48
LIP1YMR298W YRB30P53107 440 aaPredicted RBP12.08□□□□□ -0.48
LIP1YMR298W PRP5P21372 849 aaPredicted RBP12.07□□□□□ -0.48
LIP1YMR298W RVB2Q12464 471 aaKnown RBP12.07□□□□□ -0.48
LIP1YMR298W YRF1-2P40105 1681 aa12.06□□□□□ -0.48
LIP1YMR298W PRD1P25375 712 aa12.06□□□□□ -0.48
LIP1YMR298W TGL3P40308 642 aa12.06□□□□□ -0.48
LIP1YMR298W SUI2P20459 304 aaKnown RBP12.05□□□□□ -0.48
LIP1YMR298W PRP45P28004 379 aaPredicted RBP12.05□□□□□ -0.48
LIP1YMR298W RRP5Q05022 1729 aaKnown RBP12.05□□□□□ -0.48
LIP1YMR298W APC1P53886 1748 aa12.03□□□□□ -0.48
LIP1YMR298W YFR006WP43590 535 aa12.03□□□□□ -0.48
LIP1YMR298W SLM3Q12093 417 aa12.02□□□□□ -0.49
LIP1YMR298W YIL177CP40434 1758 aa12.02□□□□□ -0.49
LIP1YMR298W YJL225CP40889 1758 aa12.02□□□□□ -0.49
LIP1YMR298W AKL1P38080 1108 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms