RNA–Protein interactions for RNA: YMR172W

HOT1, Transcript of Transcription factor for glycerol biosynthetic genes, yeastyeast

Gene HOT1, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HOT1YMR172W SWH1P35845 1188 aa5.29□□□□□ -1.56
HOT1YMR172W HOS4P40480 1083 aa5.29□□□□□ -1.56
HOT1YMR172W PSD2P53037 1138 aaKnown RBP5.29□□□□□ -1.56
HOT1YMR172W ESC2Q06340 456 aa5.29□□□□□ -1.56
HOT1YMR172W KNS1P32350 737 aaPredicted RBP5.28□□□□□ -1.56
HOT1YMR172W AIM20P40451 204 aa5.28□□□□□ -1.56
HOT1YMR172W PXR1P53335 271 aaPredicted RBP5.28□□□□□ -1.56
HOT1YMR172W UBP10P53874 792 aaPredicted RBP5.28□□□□□ -1.56
HOT1YMR172W YOR389WQ08912 624 aa5.28□□□□□ -1.56
HOT1YMR172W PUS1Q12211 544 aaKnown RBP5.28□□□□□ -1.56
HOT1YMR172W NFI1Q12216 726 aa5.28□□□□□ -1.56
HOT1YMR172W SSM4P40318 1319 aa5.28□□□□□ -1.56
HOT1YMR172W IRC20Q06554 1556 aa5.28□□□□□ -1.56
HOT1YMR172W RIM101P33400 625 aa5.28□□□□□ -1.56
HOT1YMR172W BRN1P38170 754 aa5.28□□□□□ -1.56
HOT1YMR172W NDL1Q06568 189 aa5.28□□□□□ -1.56
HOT1YMR172W YKR023WP36119 530 aaKnown RBP5.27□□□□□ -1.57
HOT1YMR172W COG8Q04632 607 aa5.27□□□□□ -1.57
HOT1YMR172W GGA1Q06336 557 aa5.27□□□□□ -1.57
HOT1YMR172W IMH1Q06704 911 aaKnown RBP5.27□□□□□ -1.57
HOT1YMR172W RAD3P06839 778 aa5.26□□□□□ -1.57
HOT1YMR172W SPB4P25808 606 aaPredicted RBP5.26□□□□□ -1.57
HOT1YMR172W SPT5P27692 1063 aaKnown RBP5.26□□□□□ -1.57
HOT1YMR172W PSO2P30620 661 aa5.26□□□□□ -1.57
HOT1YMR172W PUP2P32379 260 aa5.26□□□□□ -1.57
HOT1YMR172W SEC39Q12745 709 aa5.26□□□□□ -1.57
HOT1YMR172W RAD9P14737 1309 aa5.26□□□□□ -1.57
HOT1YMR172W BRL1P38770 471 aa5.26□□□□□ -1.57
HOT1YMR172W MGA2P40578 1113 aa5.26□□□□□ -1.57
HOT1YMR172W YNL050CP53952 270 aa5.26□□□□□ -1.57
HOT1YMR172W HOS3Q02959 697 aaKnown RBP5.26□□□□□ -1.57
HOT1YMR172W RCF1Q03713 159 aa5.26□□□□□ -1.57
HOT1YMR172W CFT2Q12102 859 aaPredicted RBP5.26□□□□□ -1.57
HOT1YMR172W LSP1Q12230 341 aaKnown RBP5.26□□□□□ -1.57
HOT1YMR172W GLE1Q12315 538 aa5.26□□□□□ -1.57
HOT1YMR172W ISW1P38144 1129 aa5.25□□□□□ -1.57
HOT1YMR172W NDC80P40460 691 aa5.25□□□□□ -1.57
HOT1YMR172W YMR196WQ04336 1088 aa5.25□□□□□ -1.57
HOT1YMR172W YOL087CQ99247 1116 aa5.25□□□□□ -1.57
HOT1YMR172W UTP13Q05946 817 aaKnown RBP5.25□□□□□ -1.57
HOT1YMR172W TAF2P23255 1407 aa5.25□□□□□ -1.57
HOT1YMR172W TRM3Q07527 1436 aa5.25□□□□□ -1.57
HOT1YMR172W PSE1P32337 1089 aaKnown RBP5.24□□□□□ -1.57
HOT1YMR172W YMR1P47147 688 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
HOT1YMR172W KIP3P53086 805 aaKnown RBP5.24□□□□□ -1.57
HOT1YMR172W ORM2Q06144 216 aa5.24□□□□□ -1.57
HOT1YMR172W ARR1Q06596 294 aa5.24□□□□□ -1.57
HOT1YMR172W PIM1P36775 1133 aa5.23□□□□□ -1.57
HOT1YMR172W VPS5Q92331 675 aa5.23□□□□□ -1.57
HOT1YMR172W SPT6P23615 1451 aaKnown RBP5.23□□□□□ -1.57
HOT1YMR172W TAF13P11747 167 aa5.23□□□□□ -1.57
HOT1YMR172W PHO87P25360 923 aa5.23□□□□□ -1.57
HOT1YMR172W ASF1P32447 279 aa5.23□□□□□ -1.57
HOT1YMR172W MYO2P19524 1574 aaKnown RBP5.22□□□□□ -1.57
HOT1YMR172W CLN1P20437 546 aa5.22□□□□□ -1.57
HOT1YMR172W VPS27P40343 622 aaKnown RBP5.22□□□□□ -1.57
HOT1YMR172W MRS2Q01926 470 aa5.22□□□□□ -1.57
HOT1YMR172W NUP170P38181 1502 aa5.22□□□□□ -1.57
HOT1YMR172W DSF2P38213 736 aa5.22□□□□□ -1.57
HOT1YMR172W NPR3P38742 1146 aa5.22□□□□□ -1.57
HOT1YMR172W RIO2P40160 425 aaKnown RBP5.22□□□□□ -1.57
HOT1YMR172W MTR4P47047 1073 aaKnown RBP5.22□□□□□ -1.57
HOT1YMR172W JJJ1P53863 590 aa5.22□□□□□ -1.57
HOT1YMR172W LCD1Q04377 747 aa5.22□□□□□ -1.57
HOT1YMR172W PEX19Q07418 342 aa5.22□□□□□ -1.57
HOT1YMR172W RPG1P38249 964 aaKnown RBP5.21□□□□□ -1.58
HOT1YMR172W IAH1P41734 238 aa5.21□□□□□ -1.58
HOT1YMR172W YGL140CP53120 1219 aa5.21□□□□□ -1.58
HOT1YMR172W NOP7P53261 605 aaKnown RBP5.21□□□□□ -1.58
HOT1YMR172W DAL5P15365 543 aa5.21□□□□□ -1.58
HOT1YMR172W SEC20P28791 383 aa5.21□□□□□ -1.58
HOT1YMR172W RTT107P38850 1070 aa5.21□□□□□ -1.58
HOT1YMR172W LAM1P38851 1228 aa5.21□□□□□ -1.58
HOT1YMR172W TFG1P41895 735 aaPredicted RBP5.21□□□□□ -1.58
HOT1YMR172W TEA1P47988 759 aa5.21□□□□□ -1.58
HOT1YMR172W SLP1Q12232 587 aa5.21□□□□□ -1.58
HOT1YMR172W SFI1Q12369 946 aa5.21□□□□□ -1.58
HOT1YMR172W MLP2P40457 1679 aa5.2□□□□□ -1.58
HOT1YMR172W TY1B-DR4Q07793 1604 aa5.2□□□□□ -1.58
HOT1YMR172W RAD50P12753 1312 aa5.2□□□□□ -1.58
HOT1YMR172W GCD6P32501 712 aaKnown RBP5.2□□□□□ -1.58
HOT1YMR172W TPS3P38426 1054 aaKnown RBP5.2□□□□□ -1.58
HOT1YMR172W TPO2P53283 614 aa5.2□□□□□ -1.58
HOT1YMR172W YMR102CQ03177 834 aa5.2□□□□□ -1.58
HOT1YMR172W RRB1Q04225 511 aaKnown RBP5.2□□□□□ -1.58
HOT1YMR172W KEX2P13134 814 aa5.19□□□□□ -1.58
HOT1YMR172W BRF1P29056 596 aa5.19□□□□□ -1.58
HOT1YMR172W NUF2P33895 451 aa5.19□□□□□ -1.58
HOT1YMR172W MHP1P43638 1398 aa5.19□□□□□ -1.58
HOT1YMR172W SWI6P09959 803 aa5.19□□□□□ -1.58
HOT1YMR172W RPL5P26321 297 aaKnown RBP5.19□□□□□ -1.58
HOT1YMR172W EFB1P32471 206 aaKnown RBP5.19□□□□□ -1.58
HOT1YMR172W TOM71P38825 639 aaKnown RBP5.19□□□□□ -1.58
HOT1YMR172W SML1Q04964 104 aa5.19□□□□□ -1.58
HOT1YMR172W YDR341CQ05506 607 aaKnown RBP5.19□□□□□ -1.58
HOT1YMR172W THR4P16120 514 aaKnown RBP5.18□□□□□ -1.58
HOT1YMR172W DPH5P32469 300 aaPredicted RBP5.18□□□□□ -1.58
HOT1YMR172W OLA1P38219 394 aaKnown RBP5.18□□□□□ -1.58
HOT1YMR172W EXO84P38261 753 aa5.18□□□□□ -1.58
HOT1YMR172W SIT1P39980 628 aa5.18□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms