RNA–Protein interactions for RNA: YLR340W

RPP0, Transcript of Conserved ribosomal protein P0 of the ribosomal stalk, yeastyeast

Gene RPP0, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP0YLR340W IPL1P38991 367 aa7.31□□□□□ -1.24
RPP0YLR340W UBP9P39967 754 aa7.31□□□□□ -1.24
RPP0YLR340W YAH1Q12184 172 aaKnown RBP7.31□□□□□ -1.24
RPP0YLR340W VMR1P38735 1592 aa7.29□□□□□ -1.24
RPP0YLR340W BBC1P47068 1157 aa7.27□□□□□ -1.25
RPP0YLR340W AI2P03876 854 aa7.26□□□□□ -1.25
RPP0YLR340W TYS1P36421 394 aaKnown RBP7.25□□□□□ -1.25
RPP0YLR340W SRB8P25648 1427 aa7.24□□□□□ -1.25
RPP0YLR340W APP1P53933 587 aa7.2□□□□□ -1.26
RPP0YLR340W SIS1P25294 352 aaKnown RBP7.19□□□□□ -1.26
RPP0YLR340W MST1P07236 462 aa7.18□□□□□ -1.26
RPP0YLR340W YLR271WQ06152 274 aa7.18□□□□□ -1.26
RPP0YLR340W YOR238WQ08634 303 aa7.17□□□□□ -1.26
RPP0YLR340W BUD21Q08492 214 aaPredicted RBP7.16□□□□□ -1.26
RPP0YLR340W PDR5P33302 1511 aaKnown RBP7.16□□□□□ -1.26
RPP0YLR340W NSR1P27476 414 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
RPP0YLR340W BCK1Q01389 1478 aa7.11□□□□□ -1.27
RPP0YLR340W YMR074CQ04773 145 aa7.11□□□□□ -1.27
RPP0YLR340W YAP5P40574 245 aa7.09□□□□□ -1.27
RPP0YLR340W PDR11P40550 1411 aa7.09□□□□□ -1.28
RPP0YLR340W CFT1Q06632 1357 aaKnown RBP7.08□□□□□ -1.28
RPP0YLR340W KRE5P22023 1365 aa7.08□□□□□ -1.28
RPP0YLR340W SSP1P38871 571 aa7.07□□□□□ -1.28
RPP0YLR340W PSD2P53037 1138 aaKnown RBP7.07□□□□□ -1.28
RPP0YLR340W YBL029C-AQ3E756 94 aa7.07□□□□□ -1.28
RPP0YLR340W RIA1P53893 1110 aa7.05□□□□□ -1.28
RPP0YLR340W YNR029CP53729 429 aaKnown RBP7.04□□□□□ -1.28
RPP0YLR340W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.03□□□□□ -1.28not detected
RPP0YLR340W MRX12P47084 519 aa7.02□□□□□ -1.29
RPP0YLR340W ENT1Q12518 454 aa7.02□□□□□ -1.29
RPP0YLR340W VNX1P42839 908 aa7.01□□□□□ -1.29
RPP0YLR340W ENV9Q08651 330 aa7.01□□□□□ -1.29
RPP0YLR340W MRM1P25270 412 aa7□□□□□ -1.29
RPP0YLR340W GCN2P15442 1659 aa7□□□□□ -1.29
RPP0YLR340W IMH1Q06704 911 aaKnown RBP6.98□□□□□ -1.29
RPP0YLR340W WSC3Q12215 556 aa6.97□□□□□ -1.29
RPP0YLR340W YRF1-2P40105 1681 aa6.96□□□□□ -1.3
RPP0YLR340W SPP1Q03012 353 aa6.94□□□□□ -1.3
RPP0YLR340W NUP192P47054 1683 aa6.93□□□□□ -1.3
RPP0YLR340W TY3B-IQ7LHG5 1498 aaKnown RBP6.93□□□□□ -1.3
RPP0YLR340W GTT3P39996 337 aa6.93□□□□□ -1.3
RPP0YLR340W CST9Q06032 482 aa6.92□□□□□ -1.3
RPP0YLR340W PIB1Q06651 286 aa6.92□□□□□ -1.3
RPP0YLR340W RRP5Q05022 1729 aaKnown RBP6.92□□□□□ -1.3
RPP0YLR340W MGA2P40578 1113 aa6.91□□□□□ -1.3
RPP0YLR340W CAB1Q04430 367 aa6.89□□□□□ -1.31
RPP0YLR340W TIF11P38912 153 aaKnown RBP6.88□□□□□ -1.31
RPP0YLR340W RAD9P14737 1309 aa6.87□□□□□ -1.31
RPP0YLR340W SSA1P10591 642 aaKnown RBP6.87□□□□□ -1.31
RPP0YLR340W UBP1P25037 809 aa6.87□□□□□ -1.31
RPP0YLR340W PRP45P28004 379 aaPredicted RBP6.85□□□□□ -1.31
RPP0YLR340W RTG3P38165 486 aa6.85□□□□□ -1.31
RPP0YLR340W YBL086CP38177 466 aa6.85□□□□□ -1.31
RPP0YLR340W VPS29P38759 282 aa6.85□□□□□ -1.31
RPP0YLR340W RAV1P47104 1357 aa6.84□□□□□ -1.31
RPP0YLR340W ALD4P46367 519 aaKnown RBP6.84□□□□□ -1.31
RPP0YLR340W YMR1P47147 688 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
RPP0YLR340W LEU3P08638 886 aa6.83□□□□□ -1.32
RPP0YLR340W RPN11P43588 306 aaKnown RBP6.83□□□□□ -1.32
RPP0YLR340W SSM4P40318 1319 aa6.81□□□□□ -1.32
RPP0YLR340W IKI3Q06706 1349 aaKnown RBP6.81□□□□□ -1.32
RPP0YLR340W DBP1P24784 617 aaKnown RBP6.81□□□□□ -1.32
RPP0YLR340W URB1P34241 1764 aaKnown RBP6.8□□□□□ -1.32
RPP0YLR340W UGA2P38067 497 aa6.8□□□□□ -1.32
RPP0YLR340W TAF5P38129 798 aa6.8□□□□□ -1.32
RPP0YLR340W ULI1P43604 169 aa6.8□□□□□ -1.32
RPP0YLR340W DOT5P40553 215 aa6.79□□□□□ -1.32
RPP0YLR340W EDE1P34216 1381 aa6.79□□□□□ -1.32
RPP0YLR340W TY4B-HP0C2J7 1802 aa6.78□□□□□ -1.32
RPP0YLR340W TY4B-JP47024 1803 aa6.78□□□□□ -1.32
RPP0YLR340W LYS4P49367 693 aaPredicted RBP6.78□□□□□ -1.32
RPP0YLR340W IOC2Q12072 812 aa6.78□□□□□ -1.32
RPP0YLR340W AIR2Q12476 344 aaKnown RBP6.78□□□□□ -1.32
RPP0YLR340W RTC1Q08281 1341 aa6.77□□□□□ -1.32
RPP0YLR340W PRP5P21372 849 aaPredicted RBP6.77□□□□□ -1.33
RPP0YLR340W CPS1P27614 576 aa6.77□□□□□ -1.33
RPP0YLR340W PSK1P31374 1356 aa6.77□□□□□ -1.33
RPP0YLR340W SSA2P10592 639 aaKnown RBP6.76□□□□□ -1.33
RPP0YLR340W RCR1P38212 213 aa6.76□□□□□ -1.33
RPP0YLR340W PAF1P38351 445 aa6.76□□□□□ -1.33
RPP0YLR340W STS1P38637 319 aa6.76□□□□□ -1.33
RPP0YLR340W NPR2P39923 615 aa6.76□□□□□ -1.33
RPP0YLR340W RRD1P40454 393 aaKnown RBP6.76□□□□□ -1.33
RPP0YLR340W FKH1P40466 484 aa6.76□□□□□ -1.33
RPP0YLR340W MSB4Q12317 492 aa6.76□□□□□ -1.33
RPP0YLR340W LDB19Q12502 818 aa6.76□□□□□ -1.33
RPP0YLR340W ALD2P47771 506 aa6.75□□□□□ -1.33
RPP0YLR340W FKS3Q04952 1785 aa6.74□□□□□ -1.33
RPP0YLR340W IES2P40154 320 aa6.74□□□□□ -1.33
RPP0YLR340W YJL171CP46992 396 aa6.74□□□□□ -1.33
RPP0YLR340W FOX2Q02207 900 aaKnown RBP6.74□□□□□ -1.33
RPP0YLR340W ROM2P51862 1356 aaKnown RBP6.73□□□□□ -1.33
RPP0YLR340W VMA1P17255 1071 aaKnown RBP6.73□□□□□ -1.33
RPP0YLR340W EAP1P36041 632 aaKnown RBP6.73□□□□□ -1.33
RPP0YLR340W SET4P42948 560 aa6.73□□□□□ -1.33
RPP0YLR340W MSB3P48566 633 aaPredicted RBP6.73□□□□□ -1.33
RPP0YLR340W YOL036WQ08206 761 aa6.73□□□□□ -1.33
RPP0YLR340W YJL181WP46987 611 aa6.72□□□□□ -1.33
RPP0YLR340W CTH1P47976 325 aa6.72□□□□□ -1.33
RPP0YLR340W RCM1P53972 490 aa6.72□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms