RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C PDR11P40550 1411 aa2.96□□□□□ -1.94
IRC20YLR247C IPL1P38991 367 aa2.94□□□□□ -1.94
IRC20YLR247C UTP10P42945 1769 aaKnown RBP2.94□□□□□ -1.94
IRC20YLR247C GTT3P39996 337 aa2.94□□□□□ -1.94
IRC20YLR247C DCD1P06773 312 aa2.94□□□□□ -1.94
IRC20YLR247C RTT106P40161 455 aa2.92□□□□□ -1.94
IRC20YLR247C YLL066CQ99208 1374 aa2.92□□□□□ -1.94
IRC20YLR247C SSA1P10591 642 aaKnown RBP2.91□□□□□ -1.94
IRC20YLR247C FIG2P25653 1609 aa2.9□□□□□ -1.95
IRC20YLR247C BUD31P25337 157 aaPredicted RBP2.87□□□□□ -1.95
IRC20YLR247C TAF7Q05021 590 aa2.86□□□□□ -1.95
IRC20YLR247C POM152P39685 1337 aa2.86□□□□□ -1.95
IRC20YLR247C RSF2P46974 1380 aa2.84□□□□□ -1.95
IRC20YLR247C HOP09932 586 aa2.84□□□□□ -1.96
IRC20YLR247C TYS1P36421 394 aaKnown RBP2.84□□□□□ -1.96
IRC20YLR247C HKR1P41809 1802 aa2.83□□□□□ -1.96
IRC20YLR247C ROM2P51862 1356 aaKnown RBP2.83□□□□□ -1.96
IRC20YLR247C FAS2P19097 1887 aaKnown RBP2.83□□□□□ -1.96
IRC20YLR247C CDC27P38042 758 aa2.82□□□□□ -1.96
IRC20YLR247C APP1P53933 587 aa2.82□□□□□ -1.96
IRC20YLR247C ADE6P38972 1358 aaKnown RBP2.82□□□□□ -1.96
IRC20YLR247C YNR029CP53729 429 aaKnown RBP2.81□□□□□ -1.96
IRC20YLR247C RAV1P47104 1357 aa2.81□□□□□ -1.96
IRC20YLR247C TIF4632P39936 914 aaKnown RBP2.8□□□□□ -1.96
IRC20YLR247C UBP10P53874 792 aaPredicted RBP2.8□□□□□ -1.96
IRC20YLR247C IMH1Q06704 911 aaKnown RBP2.8□□□□□ -1.96
IRC20YLR247C ENV9Q08651 330 aa2.8□□□□□ -1.96
IRC20YLR247C SCY1P53009 804 aa2.79□□□□□ -1.96
IRC20YLR247C MAP2P38174 421 aaKnown RBP2.79□□□□□ -1.96
IRC20YLR247C CTH1P47976 325 aa2.79□□□□□ -1.96
IRC20YLR247C SPT21P35209 758 aa2.78□□□□□ -1.96
IRC20YLR247C TFA1P36100 482 aa2.78□□□□□ -1.96
IRC20YLR247C YKR023WP36119 530 aaKnown RBP2.78□□□□□ -1.96
IRC20YLR247C GSC2P40989 1895 aa2.77□□□□□ -1.97
IRC20YLR247C SLX5P32828 619 aaKnown RBP2.77□□□□□ -1.97
IRC20YLR247C TFC8Q12308 588 aa2.77□□□□□ -1.97
IRC20YLR247C ENT1Q12518 454 aa2.77□□□□□ -1.97
IRC20YLR247C PSK1P31374 1356 aa2.76□□□□□ -1.97
IRC20YLR247C RAD9P14737 1309 aa2.76□□□□□ -1.97
IRC20YLR247C KRE5P22023 1365 aa2.76□□□□□ -1.97
IRC20YLR247C YBL086CP38177 466 aa2.76□□□□□ -1.97
IRC20YLR247C NPR2P39923 615 aa2.76□□□□□ -1.97
IRC20YLR247C YLR419WQ06698 1435 aaKnown RBP2.75□□□□□ -1.97
IRC20YLR247C RRD1P40454 393 aaKnown RBP2.75□□□□□ -1.97
IRC20YLR247C PUS5Q06244 254 aa2.75□□□□□ -1.97
IRC20YLR247C UBP9P39967 754 aa2.73□□□□□ -1.97
IRC20YLR247C UBP1P25037 809 aa2.73□□□□□ -1.97
IRC20YLR247C YEF3P16521 1044 aaKnown RBP2.73□□□□□ -1.97
IRC20YLR247C BBC1P47068 1157 aa2.72□□□□□ -1.97
IRC20YLR247C MHP1P43638 1398 aa2.72□□□□□ -1.97
IRC20YLR247C RIM101P33400 625 aa2.72□□□□□ -1.97
IRC20YLR247C PRP43P53131 767 aaKnown RBP2.72□□□□□ -1.97
IRC20YLR247C RTC1Q08281 1341 aa2.72□□□□□ -1.97
IRC20YLR247C SSA2P10592 639 aaKnown RBP2.71□□□□□ -1.98
IRC20YLR247C FOX2Q02207 900 aaKnown RBP2.71□□□□□ -1.98
IRC20YLR247C UGA2P38067 497 aa2.71□□□□□ -1.98
IRC20YLR247C SPT7P35177 1332 aa2.71□□□□□ -1.98
IRC20YLR247C DOT5P40553 215 aa2.71□□□□□ -1.98
IRC20YLR247C MLP1Q02455 1875 aaKnown RBP2.71□□□□□ -1.98
IRC20YLR247C SCT1P32784 759 aa2.7□□□□□ -1.98
IRC20YLR247C ALD2P47771 506 aa2.7□□□□□ -1.98
IRC20YLR247C YKR075CP36155 307 aa2.69□□□□□ -1.98
IRC20YLR247C CKB1P43639 278 aa2.69□□□□□ -1.98
IRC20YLR247C SIR4P11978 1358 aa2.69□□□□□ -1.98
IRC20YLR247C SIS1P25294 352 aaKnown RBP2.68□□□□□ -1.98
IRC20YLR247C BCH2P36122 765 aa2.68□□□□□ -1.98
IRC20YLR247C PMD1P32634 1753 aa2.68□□□□□ -1.98
IRC20YLR247C TOS1P38288 455 aa2.68□□□□□ -1.98
IRC20YLR247C ARP8Q12386 881 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
IRC20YLR247C CPS1P27614 576 aa2.67□□□□□ -1.98
IRC20YLR247C ALD4P46367 519 aaKnown RBP2.67□□□□□ -1.98
IRC20YLR247C BDF1P35817 686 aa2.67□□□□□ -1.98
IRC20YLR247C ETP1P38748 585 aaKnown RBP2.66□□□□□ -1.98
IRC20YLR247C PEX21P50091 288 aa2.66□□□□□ -1.98
IRC20YLR247C BUD21Q08492 214 aaPredicted RBP2.66□□□□□ -1.98
IRC20YLR247C RPS9BP05755 195 aaKnown RBP2.66□□□□□ -1.98
IRC20YLR247C TGL3P40308 642 aa2.66□□□□□ -1.98
IRC20YLR247C SSA4P22202 642 aaKnown RBP2.66□□□□□ -1.98
IRC20YLR247C RSM7P47150 247 aa2.66□□□□□ -1.98
IRC20YLR247C RIA1P53893 1110 aa2.66□□□□□ -1.98
IRC20YLR247C RPN11P43588 306 aaKnown RBP2.66□□□□□ -1.98
IRC20YLR247C LYS4P49367 693 aaPredicted RBP2.66□□□□□ -1.98
IRC20YLR247C DUR1,2P32528 1835 aaKnown RBP2.64□□□□□ -1.99
IRC20YLR247C ERT1P38140 529 aa2.64□□□□□ -1.99
IRC20YLR247C EPS1P40557 701 aa2.64□□□□□ -1.99
IRC20YLR247C IKI3Q06706 1349 aaKnown RBP2.64□□□□□ -1.99
IRC20YLR247C IES2P40154 320 aa2.64□□□□□ -1.99
IRC20YLR247C DUS1P53759 423 aaKnown RBP2.63□□□□□ -1.99
IRC20YLR247C TYW1Q08960 810 aaKnown RBP2.62□□□□□ -1.99
IRC20YLR247C UTP22P53254 1237 aaPredicted RBP2.62□□□□□ -1.99
IRC20YLR247C KIN4Q01919 800 aa2.62□□□□□ -1.99
IRC20YLR247C YOR238WQ08634 303 aa2.62□□□□□ -1.99
IRC20YLR247C OXP1P28273 1286 aa2.62□□□□□ -1.99
IRC20YLR247C AI2P03876 854 aa2.62□□□□□ -1.99
IRC20YLR247C YLR278CQ05854 1341 aa2.61□□□□□ -1.99
IRC20YLR247C IFH1P39520 1085 aa2.61□□□□□ -1.99
IRC20YLR247C PRP5P21372 849 aaPredicted RBP2.61□□□□□ -1.99
IRC20YLR247C SLM3Q12093 417 aa2.61□□□□□ -1.99
IRC20YLR247C SRF1Q12516 437 aa2.61□□□□□ -1.99
IRC20YLR247C LYS2P07702 1392 aa2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 6.8 ms