RNA–Protein interactions for RNA: YLR074C

BUD20, Transcript of C2H2-type zinc finger protein required for ribosome assembly, yeastyeast

Gene BUD20, Length 501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD20YLR074C NUP192P47054 1683 aa11.84□□□□□ -0.51
BUD20YLR074C ALD4P46367 519 aaKnown RBP11.84□□□□□ -0.51
BUD20YLR074C LYS4P49367 693 aaPredicted RBP11.81□□□□□ -0.52
BUD20YLR074C TAF5P38129 798 aa11.8□□□□□ -0.52
BUD20YLR074C DOT5P40553 215 aa11.8□□□□□ -0.52
BUD20YLR074C ALD2P47771 506 aa11.78□□□□□ -0.52
BUD20YLR074C SSA2P10592 639 aaKnown RBP11.77□□□□□ -0.53
BUD20YLR074C NPR2P39923 615 aa11.76□□□□□ -0.53
BUD20YLR074C PRP5P21372 849 aaPredicted RBP11.75□□□□□ -0.53
BUD20YLR074C EDE1P34216 1381 aa11.74□□□□□ -0.53
BUD20YLR074C RAV1P47104 1357 aa11.74□□□□□ -0.53
BUD20YLR074C CPS1P27614 576 aa11.7□□□□□ -0.54
BUD20YLR074C IES2P40154 320 aa11.7□□□□□ -0.54
BUD20YLR074C YJL181WP46987 611 aa11.7□□□□□ -0.54
BUD20YLR074C FOX2Q02207 900 aaKnown RBP11.7□□□□□ -0.54
BUD20YLR074C PSK1P31374 1356 aa11.69□□□□□ -0.54
BUD20YLR074C CTH1P47976 325 aa11.69□□□□□ -0.54
BUD20YLR074C URB1P34241 1764 aaKnown RBP11.69□□□□□ -0.54
BUD20YLR074C MSB3P48566 633 aaPredicted RBP11.67□□□□□ -0.54
BUD20YLR074C IKI3Q06706 1349 aaKnown RBP11.66□□□□□ -0.54
BUD20YLR074C PAF1P38351 445 aa11.65□□□□□ -0.54
BUD20YLR074C ROM2P51862 1356 aaKnown RBP11.65□□□□□ -0.55
BUD20YLR074C SSM4P40318 1319 aa11.63□□□□□ -0.55
BUD20YLR074C RTC1Q08281 1341 aa11.63□□□□□ -0.55
BUD20YLR074C YEF3P16521 1044 aaKnown RBP11.61□□□□□ -0.55
BUD20YLR074C RCM1P53972 490 aa11.61□□□□□ -0.55
BUD20YLR074C NAP1P25293 417 aaKnown RBP11.6□□□□□ -0.55
BUD20YLR074C LAM6Q08001 693 aa11.6□□□□□ -0.55
BUD20YLR074C PRP40P33203 583 aaKnown RBP11.59□□□□□ -0.55
BUD20YLR074C TY4B-HP0C2J7 1802 aa11.58□□□□□ -0.56
BUD20YLR074C TY4B-JP47024 1803 aa11.58□□□□□ -0.56
BUD20YLR074C BFR2Q06631 534 aaKnown RBP11.58□□□□□ -0.56
BUD20YLR074C TCB1Q12466 1186 aa11.58□□□□□ -0.56
BUD20YLR074C RSF2P46974 1380 aa11.55□□□□□ -0.56
BUD20YLR074C PPH3P32345 308 aa11.55□□□□□ -0.56
BUD20YLR074C FKS3Q04952 1785 aa11.54□□□□□ -0.56
BUD20YLR074C TAF8Q03750 510 aa11.53□□□□□ -0.56
BUD20YLR074C COBP00163 385 aa11.52□□□□□ -0.57
BUD20YLR074C RPG1P38249 964 aaKnown RBP11.52□□□□□ -0.57
BUD20YLR074C ADE6P38972 1358 aaKnown RBP11.52□□□□□ -0.57
BUD20YLR074C YKR075CP36155 307 aa11.51□□□□□ -0.57
BUD20YLR074C SLM3Q12093 417 aa11.5□□□□□ -0.57
BUD20YLR074C YKL133CP36066 463 aa11.49□□□□□ -0.57
BUD20YLR074C YRF1-3P0CX14 1859 aa11.49□□□□□ -0.57
BUD20YLR074C YRF1-7P0CX15 1859 aa11.49□□□□□ -0.57
BUD20YLR074C YRF1-6P53819 1859 aa11.49□□□□□ -0.57
BUD20YLR074C SPT7P35177 1332 aa11.43□□□□□ -0.58
BUD20YLR074C BDF1P35817 686 aa11.43□□□□□ -0.58
BUD20YLR074C ENP1P38333 483 aaKnown RBP11.43□□□□□ -0.58
BUD20YLR074C ALD3P54114 506 aa11.43□□□□□ -0.58
BUD20YLR074C TOM1Q03280 3268 aa11.43□□□□□ -0.58
BUD20YLR074C EAF6P47128 113 aa11.42□□□□□ -0.58
BUD20YLR074C YRF1-4O13559 1382 aa11.41□□□□□ -0.58
BUD20YLR074C ESL2P36168 1195 aa11.39□□□□□ -0.59
BUD20YLR074C XKS1P42826 600 aa11.38□□□□□ -0.59
BUD20YLR074C SSA4P22202 642 aaKnown RBP11.37□□□□□ -0.59
BUD20YLR074C PRP43P53131 767 aaKnown RBP11.36□□□□□ -0.59
BUD20YLR074C NOP7P53261 605 aaKnown RBP11.35□□□□□ -0.59
BUD20YLR074C SNF2P22082 1703 aa11.33□□□□□ -0.6
BUD20YLR074C CSE4P36012 229 aa11.33□□□□□ -0.6
BUD20YLR074C SAP155P43612 1002 aa11.33□□□□□ -0.6
BUD20YLR074C PEX21P50091 288 aa11.32□□□□□ -0.6
BUD20YLR074C RPS24AP0CX31 135 aaKnown RBP11.3□□□□□ -0.6
BUD20YLR074C RPS24BP0CX32 135 aaKnown RBP11.3□□□□□ -0.6
BUD20YLR074C PUS5Q06244 254 aa11.3□□□□□ -0.6
BUD20YLR074C MSB4Q12317 492 aa11.3□□□□□ -0.6
BUD20YLR074C LEU2P04173 364 aaPredicted RBP11.28□□□□□ -0.6
BUD20YLR074C CTT1P06115 562 aa11.27□□□□□ -0.61
BUD20YLR074C TOS1P38288 455 aa11.27□□□□□ -0.61
BUD20YLR074C MTR4P47047 1073 aaKnown RBP11.27□□□□□ -0.61
BUD20YLR074C MSN5P52918 1224 aa11.27□□□□□ -0.61
BUD20YLR074C SQS1P53866 767 aaKnown RBP11.27□□□□□ -0.61
BUD20YLR074C FRK1Q03002 865 aaPredicted RBP11.27□□□□□ -0.61
BUD20YLR074C CHZ1P40019 153 aaPredicted RBP11.26□□□□□ -0.61
BUD20YLR074C BUG1Q12191 341 aa11.25□□□□□ -0.61
BUD20YLR074C APC1P53886 1748 aa11.24□□□□□ -0.61
BUD20YLR074C YER156CP40093 338 aaKnown RBP11.24□□□□□ -0.61
BUD20YLR074C MEC3Q02574 474 aa11.23□□□□□ -0.61
BUD20YLR074C UTP22P53254 1237 aaPredicted RBP11.21□□□□□ -0.61
BUD20YLR074C KIN4Q01919 800 aa11.21□□□□□ -0.61
BUD20YLR074C YLR419WQ06698 1435 aaKnown RBP11.2□□□□□ -0.62
BUD20YLR074C MHP1P43638 1398 aa11.2□□□□□ -0.62
BUD20YLR074C SPE2P21182 396 aa11.2□□□□□ -0.62
BUD20YLR074C ADE16P54113 591 aaKnown RBP11.2□□□□□ -0.62
BUD20YLR074C YIL177CP40434 1758 aa11.19□□□□□ -0.62
BUD20YLR074C YJL225CP40889 1758 aa11.19□□□□□ -0.62
BUD20YLR074C HPC2Q01448 625 aa11.19□□□□□ -0.62
BUD20YLR074C GRE2Q12068 342 aaKnown RBP11.18□□□□□ -0.62
BUD20YLR074C RAD4P14736 754 aa11.17□□□□□ -0.62
BUD20YLR074C YKL222CP35995 705 aa11.17□□□□□ -0.62
BUD20YLR074C ERT1P38140 529 aa11.16□□□□□ -0.62
BUD20YLR074C RCR1P38212 213 aa11.16□□□□□ -0.62
BUD20YLR074C RPO41P13433 1351 aaKnown RBP11.16□□□□□ -0.62
BUD20YLR074C CWH41P53008 833 aa11.15□□□□□ -0.62
BUD20YLR074C RRT14P40470 206 aa11.12□□□□□ -0.63
BUD20YLR074C DUS1P53759 423 aaKnown RBP11.12□□□□□ -0.63
BUD20YLR074C ATG13Q06628 738 aa11.12□□□□□ -0.63
BUD20YLR074C SIR4P11978 1358 aa11.12□□□□□ -0.63
BUD20YLR074C KIP3P53086 805 aaKnown RBP11.11□□□□□ -0.63
BUD20YLR074C FPK1P53739 893 aa11.11□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms