RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W ARG8P18544 423 aa6.09□□□□□ -1.44
SOF1YLL011W SEC20P28791 383 aa6.09□□□□□ -1.44
SOF1YLL011W RIM21P48565 533 aa6.09□□□□□ -1.44
SOF1YLL011W SPC42P36094 363 aa6.08□□□□□ -1.44
SOF1YLL011W SOL3P38858 249 aa6.08□□□□□ -1.44
SOF1YLL011W MVP1P40959 511 aaKnown RBP6.08□□□□□ -1.44
SOF1YLL011W ERP5P38819 212 aa6.07□□□□□ -1.44
SOF1YLL011W SWR1Q05471 1514 aa6.06□□□□□ -1.44
SOF1YLL011W SPT5P27692 1063 aaKnown RBP6.06□□□□□ -1.44
SOF1YLL011W ALD4P46367 519 aaKnown RBP6.06□□□□□ -1.44
SOF1YLL011W ECM23Q02710 187 aa6.06□□□□□ -1.44
SOF1YLL011W TOP1P04786 769 aa6.05□□□□□ -1.44
SOF1YLL011W MSC6Q08818 692 aaKnown RBP6.05□□□□□ -1.44
SOF1YLL011W KTR7P40504 517 aa6.04□□□□□ -1.44
SOF1YLL011W DOS2P54858 310 aa6.04□□□□□ -1.44
SOF1YLL011W RRP15Q06511 250 aaPredicted RBP6.04□□□□□ -1.44
SOF1YLL011W MAK16P10962 306 aaPredicted RBP6.03□□□□□ -1.44
SOF1YLL011W ATE1P16639 503 aa6.03□□□□□ -1.44
SOF1YLL011W POL32P47110 350 aa6.03□□□□□ -1.44
SOF1YLL011W FAR11P53917 953 aa6.03□□□□□ -1.44
SOF1YLL011W YHL050CP38721 697 aa6.02□□□□□ -1.44
SOF1YLL011W YHR219WP38900 624 aa6.02□□□□□ -1.44
SOF1YLL011W YPR109WQ06104 294 aa6.02□□□□□ -1.44
SOF1YLL011W YEL077CQ3E7X8 1277 aa6.02□□□□□ -1.44
SOF1YLL011W PEP12P32854 288 aa6.02□□□□□ -1.45
SOF1YLL011W NNF1P47149 201 aa6.02□□□□□ -1.45
SOF1YLL011W KAR5Q04746 504 aa6.02□□□□□ -1.45
SOF1YLL011W FPR4Q06205 392 aaPredicted RBP6.02□□□□□ -1.45
SOF1YLL011W KOG1P38873 1557 aa6.01□□□□□ -1.45
SOF1YLL011W UBX7P38349 436 aa6.01□□□□□ -1.45
SOF1YLL011W RDS2P19541 446 aaKnown RBP6□□□□□ -1.45
SOF1YLL011W GRS1P38088 690 aaKnown RBP6□□□□□ -1.45
SOF1YLL011W TPS3P38426 1054 aaKnown RBP6□□□□□ -1.45
SOF1YLL011W CST6P40535 587 aa6□□□□□ -1.45
SOF1YLL011W GAP1P19145 602 aaPredicted RBP5.99□□□□□ -1.45
SOF1YLL011W RSC30P38781 883 aa5.99□□□□□ -1.45
SOF1YLL011W THI12P42883 340 aa5.99□□□□□ -1.45
SOF1YLL011W THI5P43534 340 aa5.99□□□□□ -1.45
SOF1YLL011W THI11P47183 340 aa5.99□□□□□ -1.45
SOF1YLL011W YAF9P53930 226 aa5.99□□□□□ -1.45
SOF1YLL011W THI13Q07748 340 aa5.99□□□□□ -1.45
SOF1YLL011W GYP5Q12344 894 aa5.99□□□□□ -1.45
SOF1YLL011W WHI5Q12416 295 aa5.99□□□□□ -1.45
SOF1YLL011W TRL1P09880 827 aaKnown RBP5.98□□□□□ -1.45
SOF1YLL011W SIT4P20604 311 aa5.98□□□□□ -1.45
SOF1YLL011W YAP5P40574 245 aa5.98□□□□□ -1.45
SOF1YLL011W NST1P53935 1240 aa5.98□□□□□ -1.45
SOF1YLL011W OYE2Q03558 400 aaKnown RBP5.98□□□□□ -1.45
SOF1YLL011W SVF1Q05515 481 aa5.98□□□□□ -1.45
SOF1YLL011W ILV3P39522 585 aaKnown RBP5.97□□□□□ -1.45
SOF1YLL011W MDJ2P42834 146 aa5.97□□□□□ -1.45
SOF1YLL011W YPP1P46951 817 aa5.97□□□□□ -1.45
SOF1YLL011W JIP5Q06214 492 aaPredicted RBP5.97□□□□□ -1.45
SOF1YLL011W CSC1Q06538 782 aa5.97□□□□□ -1.45
SOF1YLL011W LAM6Q08001 693 aa5.97□□□□□ -1.45
SOF1YLL011W SAM3Q08986 587 aa5.97□□□□□ -1.45
SOF1YLL011W GAL2P13181 574 aa5.96□□□□□ -1.45
SOF1YLL011W SLY41P22215 453 aa5.96□□□□□ -1.45
SOF1YLL011W SEC8P32855 1065 aa5.96□□□□□ -1.45
SOF1YLL011W PPX1P38698 397 aa5.96□□□□□ -1.45
SOF1YLL011W NMD2P38798 1089 aaKnown RBP5.96□□□□□ -1.45
SOF1YLL011W MCM16Q12262 181 aa5.96□□□□□ -1.45
SOF1YLL011W TCB3Q03640 1545 aaKnown RBP5.96□□□□□ -1.45
SOF1YLL011W NSR1P27476 414 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
SOF1YLL011W DCW1P36091 449 aa5.95□□□□□ -1.46
SOF1YLL011W CWC15Q03772 175 aaKnown RBP5.95□□□□□ -1.46
SOF1YLL011W STB3Q12427 513 aa5.95□□□□□ -1.46
SOF1YLL011W ISF1P32488 338 aa5.94□□□□□ -1.46
SOF1YLL011W ATG36P46983 293 aa5.94□□□□□ -1.46
SOF1YLL011W MAG2Q06436 670 aaKnown RBP5.94□□□□□ -1.46
SOF1YLL011W YJR008WP47085 338 aa5.93□□□□□ -1.46
SOF1YLL011W RNH70P53331 553 aa5.93□□□□□ -1.46
SOF1YLL011W NAF1P53919 492 aaKnown RBP5.93□□□□□ -1.46
SOF1YLL011W YOL098CQ12496 1037 aa5.93□□□□□ -1.46
SOF1YLL011W MPH3P0CE00 602 aa5.92□□□□□ -1.46
SOF1YLL011W RPP1BP10622 106 aaKnown RBP5.92□□□□□ -1.46
SOF1YLL011W SLI15P38283 698 aa5.92□□□□□ -1.46
SOF1YLL011W RTS3P53289 263 aa5.92□□□□□ -1.46
SOF1YLL011W ENV9Q08651 330 aa5.92□□□□□ -1.46
SOF1YLL011W TY1B-DR4Q07793 1604 aa5.92□□□□□ -1.46
SOF1YLL011W AI4P03878 556 aa5.91□□□□□ -1.46
SOF1YLL011W TRM1P15565 570 aaKnown RBP5.91□□□□□ -1.46
SOF1YLL011W MET1P36150 593 aa5.91□□□□□ -1.46
SOF1YLL011W NUG1P40010 520 aaKnown RBP5.91□□□□□ -1.46
SOF1YLL011W TFB4Q12004 338 aa5.91□□□□□ -1.46
SOF1YLL011W MGE1P38523 228 aa5.9□□□□□ -1.46
SOF1YLL011W BOL3P39724 118 aa5.9□□□□□ -1.46
SOF1YLL011W PEX21P50091 288 aa5.9□□□□□ -1.46
SOF1YLL011W ATG1P53104 897 aa5.9□□□□□ -1.46
SOF1YLL011W CDC73Q06697 393 aa5.9□□□□□ -1.46
SOF1YLL011W YBL029C-AQ3E756 94 aa5.9□□□□□ -1.46
SOF1YLL011W PPG1P32838 368 aa5.9□□□□□ -1.47
SOF1YLL011W YJR107WP47145 328 aa5.9□□□□□ -1.47
SOF1YLL011W TUM1Q08686 304 aaKnown RBP5.9□□□□□ -1.47
SOF1YLL011W VAC8P39968 578 aa5.89□□□□□ -1.47
SOF1YLL011W EMP47P43555 445 aa5.89□□□□□ -1.47
SOF1YLL011W PUF6Q04373 656 aaKnown RBP5.89□□□□□ -1.47
SOF1YLL011W PNP1Q05788 311 aa5.89□□□□□ -1.47
SOF1YLL011W NUT2Q06213 157 aa5.89□□□□□ -1.47
SOF1YLL011W GLO3P38682 493 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms