RNA–Protein interactions for RNA: YKL145W

RPT1, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT1, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT1YKL145W IES2P40154 320 aa7.88□□□□□ -1.15
RPT1YKL145W NUP42P49686 430 aaKnown RBP7.87□□□□□ -1.15
RPT1YKL145W AIM44Q99299 758 aa7.87□□□□□ -1.15
RPT1YKL145W YSP2Q06681 1438 aa7.87□□□□□ -1.15
RPT1YKL145W TRM3Q07527 1436 aa7.86□□□□□ -1.15
RPT1YKL145W CHC1P22137 1653 aaKnown RBP7.86□□□□□ -1.15
RPT1YKL145W DIT2P21595 489 aa7.86□□□□□ -1.15
RPT1YKL145W CDC27P38042 758 aa7.86□□□□□ -1.15
RPT1YKL145W ORC1P54784 914 aaPredicted RBP7.86□□□□□ -1.15
RPT1YKL145W MRPL32P25348 183 aa7.85□□□□□ -1.15
RPT1YKL145W MMS1Q06211 1407 aa7.85□□□□□ -1.15
RPT1YKL145W RTG3P38165 486 aa7.84□□□□□ -1.15
RPT1YKL145W HPC2Q01448 625 aa7.83□□□□□ -1.16
RPT1YKL145W MAK21Q12176 1025 aaKnown RBP7.83□□□□□ -1.16
RPT1YKL145W EPS1P40557 701 aa7.82□□□□□ -1.16
RPT1YKL145W BNR1P40450 1375 aa7.82□□□□□ -1.16
RPT1YKL145W COQ8P27697 501 aa7.81□□□□□ -1.16
RPT1YKL145W REF2P42073 533 aaPredicted RBP7.81□□□□□ -1.16
RPT1YKL145W SSA1P10591 642 aaKnown RBP7.79□□□□□ -1.16
RPT1YKL145W DNF2Q12675 1612 aa7.79□□□□□ -1.16
RPT1YKL145W GEF1P37020 779 aa7.78□□□□□ -1.16
RPT1YKL145W BUD21Q08492 214 aaPredicted RBP7.78□□□□□ -1.16
RPT1YKL145W NOP53Q12080 455 aaKnown RBP7.78□□□□□ -1.16
RPT1YKL145W SLX8P40072 274 aa7.78□□□□□ -1.16
RPT1YKL145W TFB3Q03290 321 aa7.77□□□□□ -1.17
RPT1YKL145W SEC7P11075 2009 aaKnown RBP7.76□□□□□ -1.17
RPT1YKL145W SUB2Q07478 446 aaKnown RBP7.76□□□□□ -1.17
RPT1YKL145W NAP1P25293 417 aaKnown RBP7.75□□□□□ -1.17
RPT1YKL145W GCN2P15442 1659 aa7.74□□□□□ -1.17
RPT1YKL145W BDF1P35817 686 aa7.73□□□□□ -1.17
RPT1YKL145W VPS29P38759 282 aa7.73□□□□□ -1.17
RPT1YKL145W ATF2P53296 535 aa7.73□□□□□ -1.17
RPT1YKL145W YOR093CQ12275 1648 aa7.72□□□□□ -1.17
RPT1YKL145W COX6P00427 148 aa7.71□□□□□ -1.17
RPT1YKL145W VMR1P38735 1592 aa7.7□□□□□ -1.18
RPT1YKL145W EDS1P38073 919 aa7.69□□□□□ -1.18
RPT1YKL145W NUP188P52593 1655 aaKnown RBP7.68□□□□□ -1.18
RPT1YKL145W PKC1P24583 1151 aa7.68□□□□□ -1.18
RPT1YKL145W PDR5P33302 1511 aaKnown RBP7.68□□□□□ -1.18
RPT1YKL145W BRL1P38770 471 aa7.67□□□□□ -1.18
RPT1YKL145W IOC4Q04213 475 aa7.67□□□□□ -1.18
RPT1YKL145W GLN1P32288 370 aaKnown RBP7.65□□□□□ -1.18
RPT1YKL145W IML1P47170 1584 aa7.65□□□□□ -1.19
RPT1YKL145W MIF2P35201 549 aa7.63□□□□□ -1.19
RPT1YKL145W BIM1P40013 344 aa7.63□□□□□ -1.19
RPT1YKL145W MRX12P47084 519 aa7.62□□□□□ -1.19
RPT1YKL145W DNF3Q12674 1656 aa7.61□□□□□ -1.19
RPT1YKL145W SSA2P10592 639 aaKnown RBP7.61□□□□□ -1.19
RPT1YKL145W PDR11P40550 1411 aa7.61□□□□□ -1.19
RPT1YKL145W ATG32P40458 529 aa7.61□□□□□ -1.19
RPT1YKL145W SSA4P22202 642 aaKnown RBP7.6□□□□□ -1.19
RPT1YKL145W STS1P38637 319 aa7.6□□□□□ -1.19
RPT1YKL145W YAP3P38749 330 aa7.59□□□□□ -1.19
RPT1YKL145W PAF1P38351 445 aa7.58□□□□□ -1.2
RPT1YKL145W YJL007CP47080 104 aa7.58□□□□□ -1.2
RPT1YKL145W NOP7P53261 605 aaKnown RBP7.58□□□□□ -1.2
RPT1YKL145W YDR090CQ03193 310 aa7.58□□□□□ -1.2
RPT1YKL145W URN1Q06525 465 aaKnown RBP7.58□□□□□ -1.2
RPT1YKL145W TYS1P36421 394 aaKnown RBP7.57□□□□□ -1.2
RPT1YKL145W CSN12P47130 423 aa7.57□□□□□ -1.2
RPT1YKL145W YMR1P47147 688 aaKnown RBP RIP-Chip data7.57□□□□□ -1.2not detected
RPT1YKL145W IPL1P38991 367 aa7.56□□□□□ -1.2
RPT1YKL145W PTC3P34221 468 aaKnown RBP7.55□□□□□ -1.2
RPT1YKL145W YGL015CP33199 130 aa7.54□□□□□ -1.2
RPT1YKL145W RAV1P47104 1357 aa7.54□□□□□ -1.2
RPT1YKL145W UBP14P38237 781 aaKnown RBP7.53□□□□□ -1.2
RPT1YKL145W SCY1P53009 804 aa7.53□□□□□ -1.2
RPT1YKL145W SLD2P34252 453 aa7.52□□□□□ -1.2
RPT1YKL145W ERG12P07277 443 aa7.52□□□□□ -1.21
RPT1YKL145W TIF1P10081 395 aaKnown RBP7.52□□□□□ -1.21
RPT1YKL145W PSE1P32337 1089 aaKnown RBP7.52□□□□□ -1.21
RPT1YKL145W VHR2P40041 505 aa7.52□□□□□ -1.21
RPT1YKL145W SNU71P53207 620 aaKnown RBP7.52□□□□□ -1.21
RPT1YKL145W CPS1P27614 576 aa7.51□□□□□ -1.21
RPT1YKL145W KTR1P27810 393 aaKnown RBP7.51□□□□□ -1.21
RPT1YKL145W NUP192P47054 1683 aa7.51□□□□□ -1.21
RPT1YKL145W DBP1P24784 617 aaKnown RBP7.5□□□□□ -1.21
RPT1YKL145W TTI1P36097 1038 aa7.5□□□□□ -1.21
RPT1YKL145W RPL34BP40525 121 aaKnown RBP7.5□□□□□ -1.21
RPT1YKL145W YFR006WP43590 535 aa7.5□□□□□ -1.21
RPT1YKL145W RTC1Q08281 1341 aa7.49□□□□□ -1.21
RPT1YKL145W HAP1P0CE41 1502 aa7.48□□□□□ -1.21
RPT1YKL145W CDC3P32457 520 aaKnown RBP7.48□□□□□ -1.21
RPT1YKL145W PAM1P37304 830 aaKnown RBP7.48□□□□□ -1.21
RPT1YKL145W SSF1P38789 453 aaPredicted RBP7.48□□□□□ -1.21
RPT1YKL145W YLR326WQ06170 240 aaKnown RBP7.48□□□□□ -1.21
RPT1YKL145W NOB1Q08444 459 aaKnown RBP7.48□□□□□ -1.21
RPT1YKL145W BIO2P32451 375 aa7.47□□□□□ -1.21
RPT1YKL145W SEN54Q02825 467 aaPredicted RBP7.47□□□□□ -1.21
RPT1YKL145W MAK10Q02197 733 aa7.46□□□□□ -1.21
RPT1YKL145W RPL34AP87262 121 aaPredicted RBP7.45□□□□□ -1.22
RPT1YKL145W YPR204WQ08995 1032 aa7.45□□□□□ -1.22
RPT1YKL145W BUD31P25337 157 aaPredicted RBP7.44□□□□□ -1.22
RPT1YKL145W TAF5P38129 798 aa7.44□□□□□ -1.22
RPT1YKL145W YBL036CP38197 257 aa7.44□□□□□ -1.22
RPT1YKL145W RRN6P32786 894 aa7.43□□□□□ -1.22
RPT1YKL145W BCK1Q01389 1478 aa7.42□□□□□ -1.22
RPT1YKL145W USO1P25386 1790 aa7.42□□□□□ -1.22
RPT1YKL145W RAD9P14737 1309 aa7.42□□□□□ -1.22
RPT1YKL145W HEM3P28789 327 aa7.42□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms