RNA–Protein interactions for RNA: YKL101W

HSL1, Transcript of Nim1p-related protein kinase, yeast

Gene HSL1, Length 4,557 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSL1	YKL101W	SLX8	P40072	274 aa		2.7	□□□□□ -1.98
HSL1	YKL101W	UTP13	Q05946	817 aa	Known RBP	2.7	□□□□□ -1.98
HSL1	YKL101W	MPH3	P0CE00	602 aa		2.7	□□□□□ -1.98
HSL1	YKL101W	CHL1	P22516	861 aa	Predicted RBP	2.7	□□□□□ -1.98
HSL1	YKL101W	YJU3	P28321	313 aa		2.7	□□□□□ -1.98
HSL1	YKL101W	BIO2	P32451	375 aa		2.69	□□□□□ -1.98
HSL1	YKL101W	CSE4	P36012	229 aa		2.69	□□□□□ -1.98
HSL1	YKL101W	MCM16	Q12262	181 aa		2.69	□□□□□ -1.98
HSL1	YKL101W	DBP1	P24784	617 aa	Known RBP	2.69	□□□□□ -1.98
HSL1	YKL101W	BNI4	P53858	892 aa		2.69	□□□□□ -1.98
HSL1	YKL101W	YPR204W	Q08995	1032 aa		2.69	□□□□□ -1.98
HSL1	YKL101W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	2.69	□□□□□ -1.98	not detected
HSL1	YKL101W	NAF1	P53919	492 aa	Known RBP	2.69	□□□□□ -1.98
HSL1	YKL101W	ENT3	P47160	408 aa		2.68	□□□□□ -1.98
HSL1	YKL101W	YEL077C	Q3E7X8	1277 aa		2.68	□□□□□ -1.98
HSL1	YKL101W	PDR15	Q04182	1529 aa	Known RBP	2.68	□□□□□ -1.98
HSL1	YKL101W	PTC4	P38089	393 aa		2.68	□□□□□ -1.98
HSL1	YKL101W	XDJ1	P39102	459 aa		2.68	□□□□□ -1.98
HSL1	YKL101W	DSF2	P38213	736 aa		2.67	□□□□□ -1.98
HSL1	YKL101W	YNR021W	P53723	404 aa	Known RBP	2.67	□□□□□ -1.98
HSL1	YKL101W	TIF1	P10081	395 aa	Known RBP	2.67	□□□□□ -1.98
HSL1	YKL101W	ISF1	P32488	338 aa		2.67	□□□□□ -1.98
HSL1	YKL101W	IPL1	P38991	367 aa		2.67	□□□□□ -1.98
HSL1	YKL101W	FKH1	P40466	484 aa		2.67	□□□□□ -1.98
HSL1	YKL101W	TAF13	P11747	167 aa		2.66	□□□□□ -1.98
HSL1	YKL101W	ESS1	P22696	170 aa		2.66	□□□□□ -1.98
HSL1	YKL101W	YDR090C	Q03193	310 aa		2.66	□□□□□ -1.98
HSL1	YKL101W	TPS3	P38426	1054 aa	Known RBP	2.66	□□□□□ -1.98
HSL1	YKL101W	LEM3	P42838	414 aa		2.66	□□□□□ -1.98
HSL1	YKL101W	UBP14	P38237	781 aa	Known RBP	2.66	□□□□□ -1.98
HSL1	YKL101W	ILV3	P39522	585 aa	Known RBP	2.66	□□□□□ -1.98
HSL1	YKL101W	GCR2	Q01722	534 aa		2.66	□□□□□ -1.98
HSL1	YKL101W	GRE2	Q12068	342 aa	Known RBP	2.66	□□□□□ -1.98
HSL1	YKL101W	BMT6	Q12291	365 aa		2.66	□□□□□ -1.98
HSL1	YKL101W	ATG2	P53855	1592 aa		2.66	□□□□□ -1.98
HSL1	YKL101W	YFL034W	P43564	1073 aa		2.65	□□□□□ -1.98
HSL1	YKL101W	ARH1	P48360	493 aa		2.65	□□□□□ -1.98
HSL1	YKL101W	YDR344C	Q05510	147 aa		2.65	□□□□□ -1.99
HSL1	YKL101W	LAM6	Q08001	693 aa		2.65	□□□□□ -1.99
HSL1	YKL101W	SSA2	P10592	639 aa	Known RBP	2.65	□□□□□ -1.99
HSL1	YKL101W	HAT1	Q12341	374 aa		2.65	□□□□□ -1.99
HSL1	YKL101W	ATE1	P16639	503 aa		2.64	□□□□□ -1.99
HSL1	YKL101W	VTC4	P47075	721 aa		2.64	□□□□□ -1.99
HSL1	YKL101W	ALD2	P47771	506 aa		2.64	□□□□□ -1.99
HSL1	YKL101W	REF2	P42073	533 aa	Predicted RBP	2.64	□□□□□ -1.99
HSL1	YKL101W	DPH6	Q12429	685 aa		2.64	□□□□□ -1.99
HSL1	YKL101W	YDL129W	Q07555	291 aa		2.64	□□□□□ -1.99
HSL1	YKL101W	PRE3	P38624	215 aa		2.63	□□□□□ -1.99
HSL1	YKL101W	SOL3	P38858	249 aa		2.63	□□□□□ -1.99
HSL1	YKL101W	YLR346C	Q06139	101 aa		2.63	□□□□□ -1.99
HSL1	YKL101W	KIC1	P38692	1080 aa		2.63	□□□□□ -1.99
HSL1	YKL101W	ISU2	Q12056	156 aa		2.63	□□□□□ -1.99
HSL1	YKL101W	BCK2	P33306	851 aa		2.63	□□□□□ -1.99
HSL1	YKL101W	YJL171C	P46992	396 aa		2.63	□□□□□ -1.99
HSL1	YKL101W	ATF2	P53296	535 aa		2.63	□□□□□ -1.99
HSL1	YKL101W	HPC2	Q01448	625 aa		2.63	□□□□□ -1.99
HSL1	YKL101W	MCM1	P11746	286 aa		2.62	□□□□□ -1.99
HSL1	YKL101W	SRS2	P12954	1174 aa		2.62	□□□□□ -1.99
HSL1	YKL101W	SIS1	P25294	352 aa	Known RBP	2.62	□□□□□ -1.99
HSL1	YKL101W	RRN6	P32786	894 aa		2.62	□□□□□ -1.99
HSL1	YKL101W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	2.62	□□□□□ -1.99	not detected
HSL1	YKL101W	ERF2	Q06551	359 aa		2.62	□□□□□ -1.99
HSL1	YKL101W	SNF7	P39929	240 aa	Known RBP	2.62	□□□□□ -1.99
HSL1	YKL101W	PHM7	Q12252	991 aa		2.62	□□□□□ -1.99
HSL1	YKL101W	SIN3	P22579	1536 aa		2.62	□□□□□ -1.99
HSL1	YKL101W	PUP1	P25043	261 aa		2.61	□□□□□ -1.99
HSL1	YKL101W	RTG2	P32608	588 aa	Known RBP	2.61	□□□□□ -1.99
HSL1	YKL101W	YPK9	Q12697	1472 aa		2.61	□□□□□ -1.99
HSL1	YKL101W	PTC3	P34221	468 aa	Known RBP	2.61	□□□□□ -1.99
HSL1	YKL101W	LYS5	P50113	272 aa		2.61	□□□□□ -1.99
HSL1	YKL101W	ESP1	Q03018	1630 aa		2.61	□□□□□ -1.99
HSL1	YKL101W	COX6	P00427	148 aa		2.61	□□□□□ -1.99
HSL1	YKL101W	YLR326W	Q06170	240 aa	Known RBP	2.61	□□□□□ -1.99
HSL1	YKL101W	SLP1	Q12232	587 aa		2.61	□□□□□ -1.99
HSL1	YKL101W	ATH1	P48016	1211 aa		2.61	□□□□□ -1.99
HSL1	YKL101W	YLL054C	Q12244	843 aa		2.61	□□□□□ -1.99
HSL1	YKL101W	GYP5	Q12344	894 aa		2.61	□□□□□ -1.99
HSL1	YKL101W	RRD1	P40454	393 aa	Known RBP	2.6	□□□□□ -1.99
HSL1	YKL101W	VNX1	P42839	908 aa		2.6	□□□□□ -1.99
HSL1	YKL101W	NIS1	P53939	407 aa		2.6	□□□□□ -1.99
HSL1	YKL101W	ENO1	P00924	437 aa	Known RBP	2.6	□□□□□ -1.99
HSL1	YKL101W	CSN12	P47130	423 aa		2.6	□□□□□ -1.99
HSL1	YKL101W	MTO1	P53070	669 aa		2.6	□□□□□ -1.99
HSL1	YKL101W	TRM3	Q07527	1436 aa		2.6	□□□□□ -1.99
HSL1	YKL101W	ARL1	P38116	183 aa	Known RBP	2.6	□□□□□ -1.99
HSL1	YKL101W	ALD4	P46367	519 aa	Known RBP	2.6	□□□□□ -1.99
HSL1	YKL101W	NCR1	Q12200	1170 aa		2.59	□□□□□ -1.99
HSL1	YKL101W	IOC2	Q12072	812 aa		2.59	□□□□□ -1.99
HSL1	YKL101W	CHD1	P32657	1468 aa		2.59	□□□□□ -1.99
HSL1	YKL101W	SPP1	Q03012	353 aa		2.59	□□□□□ -1.99
HSL1	YKL101W	GSF2	Q04697	403 aa	Known RBP	2.59	□□□□□ -1.99
HSL1	YKL101W	UTP4	Q06679	776 aa	Known RBP	2.59	□□□□□ -1.99
HSL1	YKL101W	GAP1	P19145	602 aa	Predicted RBP	2.59	□□□□□ -2
HSL1	YKL101W	RSC2	Q06488	889 aa		2.59	□□□□□ -2
HSL1	YKL101W	NOP8	Q08287	484 aa	Predicted RBP	2.58	□□□□□ -2
HSL1	YKL101W	TRM732	Q03496	1420 aa		2.58	□□□□□ -2
HSL1	YKL101W	VMA1	P17255	1071 aa	Known RBP	2.58	□□□□□ -2
HSL1	YKL101W	ECM23	Q02710	187 aa		2.58	□□□□□ -2
HSL1	YKL101W	ENO2	P00925	437 aa	Known RBP	2.58	□□□□□ -2
HSL1	YKL101W	TTI1	P36097	1038 aa		2.57	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms