RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeastyeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT1YJR001W YOL098CQ12496 1037 aa5.49□□□□□ -1.53
AVT1YJR001W MYO2P19524 1574 aaKnown RBP5.49□□□□□ -1.53
AVT1YJR001W MAK16P10962 306 aaPredicted RBP5.48□□□□□ -1.53
AVT1YJR001W PUP1P25043 261 aa5.48□□□□□ -1.53
AVT1YJR001W RRP14P36080 434 aaKnown RBP5.48□□□□□ -1.53
AVT1YJR001W ENV11P53246 860 aa5.48□□□□□ -1.53
AVT1YJR001W BRE1Q07457 700 aaKnown RBP5.48□□□□□ -1.53
AVT1YJR001W YPR204WQ08995 1032 aa5.48□□□□□ -1.53
AVT1YJR001W HSP82P02829 709 aaKnown RBP5.48□□□□□ -1.53
AVT1YJR001W TPM2P40414 161 aa5.48□□□□□ -1.53
AVT1YJR001W PLP2Q12017 286 aa5.48□□□□□ -1.53
AVT1YJR001W SEC20P28791 383 aa5.47□□□□□ -1.53
AVT1YJR001W RTG2P32608 588 aaKnown RBP5.47□□□□□ -1.53
AVT1YJR001W ISW1P38144 1129 aa5.47□□□□□ -1.53
AVT1YJR001W UBP10P53874 792 aaPredicted RBP5.47□□□□□ -1.53
AVT1YJR001W NOP53Q12080 455 aaKnown RBP5.47□□□□□ -1.53
AVT1YJR001W ATE1P16639 503 aa5.46□□□□□ -1.53
AVT1YJR001W TFG1P41895 735 aaPredicted RBP5.46□□□□□ -1.53
AVT1YJR001W TY4A-JP47023 414 aa5.46□□□□□ -1.53
AVT1YJR001W MAG2Q06436 670 aaKnown RBP5.46□□□□□ -1.53
AVT1YJR001W PPG1P32838 368 aa5.46□□□□□ -1.54
AVT1YJR001W PEP1P32319 1579 aa5.45□□□□□ -1.54
AVT1YJR001W GAL11P19659 1081 aa5.45□□□□□ -1.54
AVT1YJR001W COQ8P27697 501 aa5.45□□□□□ -1.54
AVT1YJR001W MSC6Q08818 692 aaKnown RBP5.45□□□□□ -1.54
AVT1YJR001W MDS3P53094 1487 aa5.45□□□□□ -1.54
AVT1YJR001W SKI3P17883 1432 aaKnown RBP5.44□□□□□ -1.54
AVT1YJR001W SSB1P11484 613 aaKnown RBP5.44□□□□□ -1.54
AVT1YJR001W SSB2P40150 613 aaKnown RBP5.44□□□□□ -1.54
AVT1YJR001W AIM21P40563 679 aa5.44□□□□□ -1.54
AVT1YJR001W NHA1Q99271 985 aa5.44□□□□□ -1.54
AVT1YJR001W SPT2P06843 333 aaPredicted RBP5.44□□□□□ -1.54
AVT1YJR001W BIO2P32451 375 aa5.44□□□□□ -1.54
AVT1YJR001W RGA2Q06407 1009 aa5.44□□□□□ -1.54
AVT1YJR001W YOL057WQ08225 711 aa5.44□□□□□ -1.54
AVT1YJR001W CIT2P08679 460 aa5.43□□□□□ -1.54
AVT1YJR001W RPA135P22138 1203 aaKnown RBP5.43□□□□□ -1.54
AVT1YJR001W KTR1P27810 393 aaKnown RBP5.43□□□□□ -1.54
AVT1YJR001W POL32P47110 350 aa5.43□□□□□ -1.54
AVT1YJR001W YDL121CQ07541 149 aa5.43□□□□□ -1.54
AVT1YJR001W YBL113CQ7M4S9 792 aa5.43□□□□□ -1.54
AVT1YJR001W YPK9Q12697 1472 aa5.42□□□□□ -1.54
AVT1YJR001W RAD2P07276 1031 aa5.42□□□□□ -1.54
AVT1YJR001W MRM1P25270 412 aa5.42□□□□□ -1.54
AVT1YJR001W SPT16P32558 1035 aaKnown RBP5.42□□□□□ -1.54
AVT1YJR001W TIF4632P39936 914 aaKnown RBP5.42□□□□□ -1.54
AVT1YJR001W RPT2P40327 437 aaKnown RBP5.42□□□□□ -1.54
AVT1YJR001W ALG12P53730 551 aa5.42□□□□□ -1.54
AVT1YJR001W GRX4P32642 244 aa5.41□□□□□ -1.54
AVT1YJR001W RTG3P38165 486 aa5.41□□□□□ -1.54
AVT1YJR001W YBL036CP38197 257 aa5.41□□□□□ -1.54
AVT1YJR001W UBP14P38237 781 aaKnown RBP5.41□□□□□ -1.54
AVT1YJR001W BOI2P39969 1040 aa5.41□□□□□ -1.54
AVT1YJR001W TLG1Q03322 224 aa5.41□□□□□ -1.54
AVT1YJR001W VMA4P22203 233 aaKnown RBP5.41□□□□□ -1.54
AVT1YJR001W MPP10P47083 593 aaKnown RBP5.41□□□□□ -1.54
AVT1YJR001W SEC8P32855 1065 aa5.4□□□□□ -1.54
AVT1YJR001W ERP5P38819 212 aa5.4□□□□□ -1.54
AVT1YJR001W IOC3P43596 787 aa5.4□□□□□ -1.54
AVT1YJR001W GIR2Q03768 265 aaPredicted RBP5.4□□□□□ -1.54
AVT1YJR001W TFC8Q12308 588 aa5.4□□□□□ -1.54
AVT1YJR001W SRP40P32583 406 aaPredicted RBP5.39□□□□□ -1.55
AVT1YJR001W ENP1P38333 483 aaKnown RBP5.39□□□□□ -1.55
AVT1YJR001W BBC1P47068 1157 aa5.39□□□□□ -1.55
AVT1YJR001W YNL108CP53929 270 aa5.39□□□□□ -1.55
AVT1YJR001W OYE2Q03558 400 aaKnown RBP5.39□□□□□ -1.55
AVT1YJR001W JIP5Q06214 492 aaPredicted RBP5.39□□□□□ -1.55
AVT1YJR001W STB3Q12427 513 aa5.39□□□□□ -1.55
AVT1YJR001W POL1P13382 1468 aa5.39□□□□□ -1.55
AVT1YJR001W HOP09932 586 aa5.39□□□□□ -1.55
AVT1YJR001W ERP2P39704 215 aa5.39□□□□□ -1.55
AVT1YJR001W TMA64Q04600 565 aaKnown RBP5.39□□□□□ -1.55
AVT1YJR001W SUP45P12385 437 aaKnown RBP5.38□□□□□ -1.55
AVT1YJR001W MPE1P35728 441 aaKnown RBP5.38□□□□□ -1.55
AVT1YJR001W SCC2Q04002 1493 aa5.37□□□□□ -1.55
AVT1YJR001W TRL1P09880 827 aaKnown RBP5.37□□□□□ -1.55
AVT1YJR001W ECM16Q04217 1267 aaKnown RBP5.37□□□□□ -1.55
AVT1YJR001W WHI5Q12416 295 aa5.37□□□□□ -1.55
AVT1YJR001W TGL4P36165 910 aa5.37□□□□□ -1.55
AVT1YJR001W YHL050CP38721 697 aa5.37□□□□□ -1.55
AVT1YJR001W YHR219WP38900 624 aa5.37□□□□□ -1.55
AVT1YJR001W TCB2P48231 1178 aa5.37□□□□□ -1.55
AVT1YJR001W POB3Q04636 552 aaKnown RBP5.37□□□□□ -1.55
AVT1YJR001W YEL077CQ3E7X8 1277 aa5.37□□□□□ -1.55
AVT1YJR001W STU1P38198 1513 aa5.36□□□□□ -1.55
AVT1YJR001W YKL091CP33324 310 aaKnown RBP5.36□□□□□ -1.55
AVT1YJR001W VAC8P39968 578 aa5.36□□□□□ -1.55
AVT1YJR001W BUD6P41697 788 aa5.36□□□□□ -1.55
AVT1YJR001W ALD3P54114 506 aa5.36□□□□□ -1.55
AVT1YJR001W DNM1P54861 757 aa5.36□□□□□ -1.55
AVT1YJR001W MRX10Q05648 414 aa5.36□□□□□ -1.55
AVT1YJR001W ENO1P00924 437 aaKnown RBP5.35□□□□□ -1.55
AVT1YJR001W RNA1P11745 407 aaKnown RBP5.35□□□□□ -1.55
AVT1YJR001W KAR1P11927 433 aa5.35□□□□□ -1.55
AVT1YJR001W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
AVT1YJR001W PPX1P38698 397 aa5.35□□□□□ -1.55
AVT1YJR001W POL5P39985 1022 aaKnown RBP5.35□□□□□ -1.55
AVT1YJR001W VPS27P40343 622 aaKnown RBP5.35□□□□□ -1.55
AVT1YJR001W YDR090CQ03193 310 aa5.35□□□□□ -1.55
AVT1YJR001W RPN4Q03465 531 aa5.35□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms