RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBF2	YGR140W	NIS1	P53939	407 aa		3.18	□□□□□ -1.9
CBF2	YGR140W	YAP5	P40574	245 aa		3.18	□□□□□ -1.9
CBF2	YGR140W	ECM23	Q02710	187 aa		3.18	□□□□□ -1.9
CBF2	YGR140W	GYP5	Q12344	894 aa		3.18	□□□□□ -1.9
CBF2	YGR140W	RGR1	P19263	1082 aa		3.17	□□□□□ -1.9
CBF2	YGR140W	GRS1	P38088	690 aa	Known RBP	3.17	□□□□□ -1.9
CBF2	YGR140W	SCJ1	P25303	377 aa		3.17	□□□□□ -1.9
CBF2	YGR140W	YJU3	P28321	313 aa		3.17	□□□□□ -1.9
CBF2	YGR140W	UBX7	P38349	436 aa		3.17	□□□□□ -1.9
CBF2	YGR140W	YPR109W	Q06104	294 aa		3.17	□□□□□ -1.9
CBF2	YGR140W	CSC1	Q06538	782 aa		3.17	□□□□□ -1.9
CBF2	YGR140W	LAM6	Q08001	693 aa		3.17	□□□□□ -1.9
CBF2	YGR140W	ENV9	Q08651	330 aa		3.17	□□□□□ -1.9
CBF2	YGR140W	YDJ1	P25491	409 aa	Known RBP	3.16	□□□□□ -1.9
CBF2	YGR140W	MGE1	P38523	228 aa		3.16	□□□□□ -1.9
CBF2	YGR140W	ERP5	P38819	212 aa		3.16	□□□□□ -1.9
CBF2	YGR140W	RIM21	P48565	533 aa		3.16	□□□□□ -1.9
CBF2	YGR140W	JIP5	Q06214	492 aa	Predicted RBP	3.16	□□□□□ -1.9
CBF2	YGR140W	MAK16	P10962	306 aa	Predicted RBP	3.16	□□□□□ -1.9
CBF2	YGR140W	MSC6	Q08818	692 aa	Known RBP	3.16	□□□□□ -1.9
CBF2	YGR140W	OCA5	P38738	679 aa		3.15	□□□□□ -1.9
CBF2	YGR140W	NMD2	P38798	1089 aa	Known RBP	3.15	□□□□□ -1.9
CBF2	YGR140W	GTT3	P39996	337 aa		3.15	□□□□□ -1.9
CBF2	YGR140W	MVP1	P40959	511 aa	Known RBP	3.15	□□□□□ -1.9
CBF2	YGR140W	MRX10	Q05648	414 aa		3.15	□□□□□ -1.9
CBF2	YGR140W	SLY41	P22215	453 aa		3.15	□□□□□ -1.91
CBF2	YGR140W	SPC42	P36094	363 aa		3.15	□□□□□ -1.91
CBF2	YGR140W	YHL050C	P38721	697 aa		3.15	□□□□□ -1.91
CBF2	YGR140W	YHR219W	P38900	624 aa		3.15	□□□□□ -1.91
CBF2	YGR140W	DOS2	P54858	310 aa		3.15	□□□□□ -1.91
CBF2	YGR140W	TBF1	Q02457	562 aa		3.15	□□□□□ -1.91
CBF2	YGR140W	YEL077C	Q3E7X8	1277 aa		3.15	□□□□□ -1.91
CBF2	YGR140W	RRP14	P36080	434 aa	Known RBP	3.14	□□□□□ -1.91
CBF2	YGR140W	ATG3	P40344	310 aa		3.14	□□□□□ -1.91
CBF2	YGR140W	ALD4	P46367	519 aa	Known RBP	3.14	□□□□□ -1.91
CBF2	YGR140W	ALD2	P47771	506 aa		3.14	□□□□□ -1.91
CBF2	YGR140W	YAF9	P53930	226 aa		3.14	□□□□□ -1.91
CBF2	YGR140W	OYE2	Q03558	400 aa	Known RBP	3.14	□□□□□ -1.91
CBF2	YGR140W	PPG1	P32838	368 aa		3.14	□□□□□ -1.91
CBF2	YGR140W	DCW1	P36091	449 aa		3.14	□□□□□ -1.91
CBF2	YGR140W	RTS3	P53289	263 aa		3.14	□□□□□ -1.91
CBF2	YGR140W	TFB4	Q12004	338 aa		3.14	□□□□□ -1.91
CBF2	YGR140W	GAL2	P13181	574 aa		3.14	□□□□□ -1.91
CBF2	YGR140W	TIF4632	P39936	914 aa	Known RBP	3.14	□□□□□ -1.91
CBF2	YGR140W	NAF1	P53919	492 aa	Known RBP	3.14	□□□□□ -1.91
CBF2	YGR140W	OSW7	P43611	510 aa		3.13	□□□□□ -1.91
CBF2	YGR140W	MCM16	Q12262	181 aa		3.13	□□□□□ -1.91
CBF2	YGR140W	SUB1	P54000	292 aa	Known RBP	3.13	□□□□□ -1.91
CBF2	YGR140W	PPX1	P38698	397 aa		3.12	□□□□□ -1.91
CBF2	YGR140W	CST6	P40535	587 aa		3.12	□□□□□ -1.91
CBF2	YGR140W	FUR4	P05316	633 aa	Known RBP	3.12	□□□□□ -1.91
CBF2	YGR140W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
CBF2	YGR140W	MAD1	P40957	749 aa		3.12	□□□□□ -1.91
CBF2	YGR140W	SAM3	Q08986	587 aa		3.12	□□□□□ -1.91
CBF2	YGR140W	HTA1	P04911	132 aa	Known RBP	3.11	□□□□□ -1.91
CBF2	YGR140W	HTA2	P04912	132 aa		3.11	□□□□□ -1.91
CBF2	YGR140W	SPT2	P06843	333 aa	Predicted RBP	3.11	□□□□□ -1.91
CBF2	YGR140W	SRP40	P32583	406 aa	Predicted RBP	3.11	□□□□□ -1.91
CBF2	YGR140W	FAR11	P53917	953 aa		3.11	□□□□□ -1.91
CBF2	YGR140W	YOL098C	Q12496	1037 aa		3.11	□□□□□ -1.91
CBF2	YGR140W	SIT4	P20604	311 aa		3.11	□□□□□ -1.91
CBF2	YGR140W	PEP12	P32854	288 aa		3.11	□□□□□ -1.91
CBF2	YGR140W	FPR3	P38911	411 aa	Known RBP	3.11	□□□□□ -1.91
CBF2	YGR140W	PUF6	Q04373	656 aa	Known RBP	3.11	□□□□□ -1.91
CBF2	YGR140W	TUM1	Q08686	304 aa	Known RBP	3.11	□□□□□ -1.91
CBF2	YGR140W	BUD31	P25337	157 aa	Predicted RBP	3.1	□□□□□ -1.91
CBF2	YGR140W	SEC8	P32855	1065 aa		3.1	□□□□□ -1.91
CBF2	YGR140W	GLO3	P38682	493 aa	Known RBP	3.1	□□□□□ -1.91
CBF2	YGR140W	RNH70	P53331	553 aa		3.1	□□□□□ -1.91
CBF2	YGR140W	AI4	P03878	556 aa		3.1	□□□□□ -1.91
CBF2	YGR140W	HAP4	P14064	554 aa		3.1	□□□□□ -1.91
CBF2	YGR140W	TRM1	P15565	570 aa	Known RBP	3.1	□□□□□ -1.91
CBF2	YGR140W	YKL091C	P33324	310 aa	Known RBP	3.1	□□□□□ -1.91
CBF2	YGR140W	SOL3	P38858	249 aa		3.1	□□□□□ -1.91
CBF2	YGR140W	NUG1	P40010	520 aa	Known RBP	3.1	□□□□□ -1.91
CBF2	YGR140W	YJR008W	P47085	338 aa		3.1	□□□□□ -1.91
CBF2	YGR140W	ATG1	P53104	897 aa		3.1	□□□□□ -1.91
CBF2	YGR140W	PUN1	Q06991	263 aa		3.1	□□□□□ -1.91
CBF2	YGR140W	MPH3	P0CE00	602 aa		3.1	□□□□□ -1.91
CBF2	YGR140W	ATE1	P16639	503 aa		3.1	□□□□□ -1.91
CBF2	YGR140W	YNL115C	P53925	644 aa		3.1	□□□□□ -1.91
CBF2	YGR140W	PNP1	Q05788	311 aa		3.1	□□□□□ -1.91
CBF2	YGR140W	PHO87	P25360	923 aa		3.09	□□□□□ -1.91
CBF2	YGR140W	MET1	P36150	593 aa		3.09	□□□□□ -1.91
CBF2	YGR140W	RTF1	P53064	558 aa		3.09	□□□□□ -1.91
CBF2	YGR140W	PUS6	P53294	404 aa		3.09	□□□□□ -1.91
CBF2	YGR140W	CLN2	P20438	545 aa		3.09	□□□□□ -1.92
CBF2	YGR140W	ISF1	P32488	338 aa		3.09	□□□□□ -1.92
CBF2	YGR140W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.92	not detected
CBF2	YGR140W	EMP47	P43555	445 aa		3.09	□□□□□ -1.92
CBF2	YGR140W	RRP15	Q06511	250 aa	Predicted RBP	3.09	□□□□□ -1.92
CBF2	YGR140W	YOR131C	Q12486	218 aa		3.09	□□□□□ -1.92
CBF2	YGR140W	VAN1	P23642	535 aa		3.08	□□□□□ -1.92
CBF2	YGR140W	MDJ2	P42834	146 aa		3.08	□□□□□ -1.92
CBF2	YGR140W	TRS33	Q99394	268 aa		3.08	□□□□□ -1.92
CBF2	YGR140W	SRS2	P12954	1174 aa		3.08	□□□□□ -1.92
CBF2	YGR140W	VAC8	P39968	578 aa		3.08	□□□□□ -1.92
CBF2	YGR140W	VPS72	Q03388	795 aa		3.08	□□□□□ -1.92
CBF2	YGR140W	CWC15	Q03772	175 aa	Known RBP	3.08	□□□□□ -1.92
CBF2	YGR140W	CDC73	Q06697	393 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms