RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W TY1B-MR2Q04670 1755 aaKnown RBP4.44□□□□□ -1.7
SPT6YGR116W TY1B-LR1Q12088 1755 aaKnown RBP4.44□□□□□ -1.7
SPT6YGR116W TY1B-NL1Q12112 1755 aa4.44□□□□□ -1.7
SPT6YGR116W TY1B-GR1Q12141 1755 aa4.44□□□□□ -1.7
SPT6YGR116W TY1B-BLQ12490 1755 aa4.44□□□□□ -1.7
SPT6YGR116W YPP1P46951 817 aa4.44□□□□□ -1.7
SPT6YGR116W CTR9P89105 1077 aa4.44□□□□□ -1.7
SPT6YGR116W MPP10P47083 593 aaKnown RBP4.43□□□□□ -1.7
SPT6YGR116W ITC1P53125 1264 aa4.43□□□□□ -1.7
SPT6YGR116W MAK21Q12176 1025 aaKnown RBP4.43□□□□□ -1.7
SPT6YGR116W DRS2P39524 1355 aa4.43□□□□□ -1.7
SPT6YGR116W TRM3Q07527 1436 aa4.43□□□□□ -1.7
SPT6YGR116W RTR1P40084 226 aaPredicted RBP4.43□□□□□ -1.7
SPT6YGR116W RNA1P11745 407 aaKnown RBP4.43□□□□□ -1.7
SPT6YGR116W RTG3P38165 486 aa4.43□□□□□ -1.7
SPT6YGR116W YGR130CP53278 816 aa4.42□□□□□ -1.7
SPT6YGR116W YSP2Q06681 1438 aa4.42□□□□□ -1.7
SPT6YGR116W RPO21P04050 1733 aaKnown RBP4.42□□□□□ -1.7
SPT6YGR116W DNF2Q12675 1612 aa4.42□□□□□ -1.7
SPT6YGR116W TPM2P40414 161 aa4.42□□□□□ -1.7
SPT6YGR116W BNR1P40450 1375 aa4.42□□□□□ -1.7
SPT6YGR116W LCD1Q04377 747 aa4.41□□□□□ -1.7
SPT6YGR116W DAL5P15365 543 aa4.41□□□□□ -1.7
SPT6YGR116W MTC1P47018 478 aaKnown RBP4.41□□□□□ -1.7
SPT6YGR116W YRF1-4O13559 1382 aa4.4□□□□□ -1.7
SPT6YGR116W YML133CQ03099 1374 aa4.4□□□□□ -1.7
SPT6YGR116W YLL067CQ07888 1374 aa4.4□□□□□ -1.7
SPT6YGR116W YLL066CQ99208 1374 aa4.4□□□□□ -1.7
SPT6YGR116W SMC3P47037 1230 aa4.4□□□□□ -1.7
SPT6YGR116W TEA1P47988 759 aa4.4□□□□□ -1.7
SPT6YGR116W PIL1P53252 339 aaKnown RBP4.4□□□□□ -1.7
SPT6YGR116W TCD1P38756 429 aa4.4□□□□□ -1.7
SPT6YGR116W FKH1P40466 484 aa4.4□□□□□ -1.7
SPT6YGR116W POL32P47110 350 aa4.4□□□□□ -1.7
SPT6YGR116W SAP155P43612 1002 aa4.4□□□□□ -1.71
SPT6YGR116W PDR11P40550 1411 aa4.39□□□□□ -1.71
SPT6YGR116W BUD3P25558 1636 aa4.39□□□□□ -1.71
SPT6YGR116W YIL092WP40497 633 aa4.39□□□□□ -1.71
SPT6YGR116W KRE5P22023 1365 aa4.39□□□□□ -1.71
SPT6YGR116W SNF2P22082 1703 aa4.39□□□□□ -1.71
SPT6YGR116W SRS2P12954 1174 aa4.39□□□□□ -1.71
SPT6YGR116W CHZ1P40019 153 aaPredicted RBP4.39□□□□□ -1.71
SPT6YGR116W URN1Q06525 465 aaKnown RBP4.39□□□□□ -1.71
SPT6YGR116W TPD3P31383 635 aa4.39□□□□□ -1.71
SPT6YGR116W TRK1P12685 1235 aa4.38□□□□□ -1.71
SPT6YGR116W PUF6Q04373 656 aaKnown RBP4.38□□□□□ -1.71
SPT6YGR116W SIR4P11978 1358 aa4.38□□□□□ -1.71
SPT6YGR116W KAR2P16474 682 aaKnown RBP4.38□□□□□ -1.71
SPT6YGR116W RPN1P38764 993 aaKnown RBP4.38□□□□□ -1.71
SPT6YGR116W NOP53Q12080 455 aaKnown RBP4.38□□□□□ -1.71
SPT6YGR116W CHC1P22137 1653 aaKnown RBP4.38□□□□□ -1.71
SPT6YGR116W MIC60P36112 540 aa4.38□□□□□ -1.71
SPT6YGR116W RSC1P53236 928 aa4.38□□□□□ -1.71
SPT6YGR116W KNS1P32350 737 aaPredicted RBP4.37□□□□□ -1.71
SPT6YGR116W HAP5Q02516 242 aa4.37□□□□□ -1.71
SPT6YGR116W MET5P47169 1442 aa4.37□□□□□ -1.71
SPT6YGR116W HAP1P0CE41 1502 aa4.36□□□□□ -1.71
SPT6YGR116W RPS0BP46654 252 aaKnown RBP4.36□□□□□ -1.71
SPT6YGR116W TAF8Q03750 510 aa4.36□□□□□ -1.71
SPT6YGR116W VMR1P38735 1592 aa4.36□□□□□ -1.71
SPT6YGR116W RAD50P12753 1312 aa4.36□□□□□ -1.71
SPT6YGR116W FPR4Q06205 392 aaPredicted RBP4.36□□□□□ -1.71
SPT6YGR116W MLP1Q02455 1875 aaKnown RBP4.36□□□□□ -1.71
SPT6YGR116W YEF3P16521 1044 aaKnown RBP4.36□□□□□ -1.71
SPT6YGR116W RSM25P40496 264 aa4.35□□□□□ -1.71
SPT6YGR116W PAP2P53632 584 aaKnown RBP4.35□□□□□ -1.71
SPT6YGR116W MDG1P53885 366 aa4.35□□□□□ -1.71
SPT6YGR116W HOS3Q02959 697 aaKnown RBP4.35□□□□□ -1.71
SPT6YGR116W IML1P47170 1584 aa4.35□□□□□ -1.71
SPT6YGR116W SPO14P36126 1683 aa4.35□□□□□ -1.71
SPT6YGR116W VPS60Q03390 229 aa4.35□□□□□ -1.71
SPT6YGR116W BDH2P39713 417 aa4.34□□□□□ -1.71
SPT6YGR116W STU2P46675 888 aa4.34□□□□□ -1.71
SPT6YGR116W RPA190P10964 1664 aaKnown RBP4.34□□□□□ -1.71
SPT6YGR116W PRD1P25375 712 aa4.34□□□□□ -1.71
SPT6YGR116W DOP1Q03921 1698 aa4.34□□□□□ -1.72
SPT6YGR116W HST1P53685 503 aa4.34□□□□□ -1.72
SPT6YGR116W RAD9P14737 1309 aa4.34□□□□□ -1.72
SPT6YGR116W NUP145P49687 1317 aa4.34□□□□□ -1.72
SPT6YGR116W KEX1P09620 729 aa4.33□□□□□ -1.72
SPT6YGR116W RNR2P09938 399 aaKnown RBP4.33□□□□□ -1.72
SPT6YGR116W TAF13P11747 167 aa4.33□□□□□ -1.72
SPT6YGR116W KRI1P42846 591 aaKnown RBP4.33□□□□□ -1.72
SPT6YGR116W RPN12P32496 274 aa4.33□□□□□ -1.72
SPT6YGR116W LTV1P34078 463 aa4.33□□□□□ -1.72
SPT6YGR116W CSE4P36012 229 aa4.33□□□□□ -1.72
SPT6YGR116W BIK1P11709 440 aa4.33□□□□□ -1.72
SPT6YGR116W RKM3P38222 552 aa4.33□□□□□ -1.72
SPT6YGR116W THI22Q06490 572 aa4.33□□□□□ -1.72
SPT6YGR116W SFI1Q12369 946 aa4.33□□□□□ -1.72
SPT6YGR116W AVT3P36062 692 aa4.32□□□□□ -1.72
SPT6YGR116W RAD26P40352 1085 aa4.32□□□□□ -1.72
SPT6YGR116W RNT1Q02555 471 aa4.32□□□□□ -1.72
SPT6YGR116W ETT1Q08421 412 aaKnown RBP4.32□□□□□ -1.72
SPT6YGR116W DLD1P32891 587 aa4.32□□□□□ -1.72
SPT6YGR116W RTF1P53064 558 aa4.32□□□□□ -1.72
SPT6YGR116W RVS167P39743 482 aaKnown RBP4.32□□□□□ -1.72
SPT6YGR116W HEF3P53978 1044 aaKnown RBP4.32□□□□□ -1.72
SPT6YGR116W CYC8P14922 966 aa4.32□□□□□ -1.72
SPT6YGR116W PDI1P17967 522 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms