RNA–Protein interactions for RNA: YGR112W

SHY1, Transcript of Mitochondrial inner membrane protein required for complex IV assembly, yeastyeast

Gene SHY1, Length 1,170 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHY1YGR112W YLL066CQ99208 1374 aa12.18□□□□□ -0.46
SHY1YGR112W CFT1Q06632 1357 aaKnown RBP12.17□□□□□ -0.46
SHY1YGR112W YEF3P16521 1044 aaKnown RBP12.16□□□□□ -0.46
SHY1YGR112W MAK10Q02197 733 aa12.16□□□□□ -0.46
SHY1YGR112W TRK1P12685 1235 aa12.15□□□□□ -0.46
SHY1YGR112W RCM1P53972 490 aa12.15□□□□□ -0.46
SHY1YGR112W RPP0P05317 312 aaKnown RBP12.13□□□□□ -0.47
SHY1YGR112W IOC4Q04213 475 aa12.13□□□□□ -0.47
SHY1YGR112W PSK1P31374 1356 aa12.13□□□□□ -0.47
SHY1YGR112W PPH3P32345 308 aa12.12□□□□□ -0.47
SHY1YGR112W ABP1P15891 592 aaKnown RBP12.1□□□□□ -0.47
SHY1YGR112W VPS27P40343 622 aaKnown RBP12.1□□□□□ -0.47
SHY1YGR112W CDC45Q08032 650 aa12.1□□□□□ -0.47
SHY1YGR112W YDL144CQ07589 356 aa12.08□□□□□ -0.48
SHY1YGR112W YNR029CP53729 429 aaKnown RBP12.06□□□□□ -0.48
SHY1YGR112W FUN12P39730 1002 aaKnown RBP12.05□□□□□ -0.48
SHY1YGR112W RVB2Q12464 471 aaKnown RBP12.05□□□□□ -0.48
SHY1YGR112W CPS1P27614 576 aa12.04□□□□□ -0.48
SHY1YGR112W SNF2P22082 1703 aa12.03□□□□□ -0.48
SHY1YGR112W LEU2P04173 364 aaPredicted RBP12.02□□□□□ -0.49
SHY1YGR112W KAR2P16474 682 aaKnown RBP12.01□□□□□ -0.49
SHY1YGR112W MPP10P47083 593 aaKnown RBP12.01□□□□□ -0.49
SHY1YGR112W TAP42Q04372 366 aa12.01□□□□□ -0.49
SHY1YGR112W SUI2P20459 304 aaKnown RBP12□□□□□ -0.49
SHY1YGR112W RRP46P53256 223 aaPredicted RBP12□□□□□ -0.49
SHY1YGR112W PDI1P17967 522 aaKnown RBP11.99□□□□□ -0.49
SHY1YGR112W TY1B-NL2Q99337 1749 aaKnown RBP11.98□□□□□ -0.49
SHY1YGR112W RTR1P40084 226 aaPredicted RBP11.98□□□□□ -0.49
SHY1YGR112W MTR4P47047 1073 aaKnown RBP11.98□□□□□ -0.49
SHY1YGR112W HIM1Q06674 414 aa11.98□□□□□ -0.49
SHY1YGR112W AUS1Q08409 1394 aa11.96□□□□□ -0.49
SHY1YGR112W USO1P25386 1790 aa11.96□□□□□ -0.49
SHY1YGR112W RTF1P53064 558 aa11.95□□□□□ -0.5
SHY1YGR112W YRB30P53107 440 aaPredicted RBP11.95□□□□□ -0.5
SHY1YGR112W GRX4P32642 244 aa11.94□□□□□ -0.5
SHY1YGR112W PAP2P53632 584 aaKnown RBP11.94□□□□□ -0.5
SHY1YGR112W TFA1P36100 482 aa11.93□□□□□ -0.5
SHY1YGR112W SAP155P43612 1002 aa11.92□□□□□ -0.5
SHY1YGR112W RPS24AP0CX31 135 aaKnown RBP11.91□□□□□ -0.5
SHY1YGR112W RPS24BP0CX32 135 aaKnown RBP11.91□□□□□ -0.5
SHY1YGR112W CSE4P36012 229 aa11.91□□□□□ -0.5
SHY1YGR112W PRD1P25375 712 aa11.9□□□□□ -0.5
SHY1YGR112W PRP43P53131 767 aaKnown RBP11.9□□□□□ -0.5
SHY1YGR112W ADE6P38972 1358 aaKnown RBP11.9□□□□□ -0.5
SHY1YGR112W THI22Q06490 572 aa11.89□□□□□ -0.51
SHY1YGR112W TPD3P31383 635 aa11.88□□□□□ -0.51
SHY1YGR112W NAB6Q03735 1134 aaKnown RBP RIP-Chip data11.88□□□□□ -0.51not detected
SHY1YGR112W GAS4Q08271 471 aa11.88□□□□□ -0.51
SHY1YGR112W FPR3P38911 411 aaKnown RBP11.87□□□□□ -0.51
SHY1YGR112W YMR196WQ04336 1088 aa11.87□□□□□ -0.51
SHY1YGR112W RPO41P13433 1351 aaKnown RBP11.84□□□□□ -0.51
SHY1YGR112W DPS1P04802 557 aaKnown RBP11.84□□□□□ -0.51
SHY1YGR112W HEF3P53978 1044 aaKnown RBP11.84□□□□□ -0.51
SHY1YGR112W RAD2P07276 1031 aa11.81□□□□□ -0.52
SHY1YGR112W THI12P42883 340 aa11.81□□□□□ -0.52
SHY1YGR112W THI5P43534 340 aa11.81□□□□□ -0.52
SHY1YGR112W THI11P47183 340 aa11.81□□□□□ -0.52
SHY1YGR112W THI13Q07748 340 aa11.81□□□□□ -0.52
SHY1YGR112W RTT109Q07794 436 aa11.81□□□□□ -0.52
SHY1YGR112W RPC31P17890 251 aa11.8□□□□□ -0.52
SHY1YGR112W BUB1P41695 1021 aaKnown RBP RIP-Chip data11.79□□□□□ -0.52not detected
SHY1YGR112W TY4B-HP0C2J7 1802 aa11.79□□□□□ -0.52
SHY1YGR112W TY4B-JP47024 1803 aa11.79□□□□□ -0.52
SHY1YGR112W YIL092WP40497 633 aa11.78□□□□□ -0.52
SHY1YGR112W DAL5P15365 543 aa11.77□□□□□ -0.53
SHY1YGR112W AKL1P38080 1108 aaKnown RBP11.77□□□□□ -0.53
SHY1YGR112W SIR4P11978 1358 aa11.77□□□□□ -0.53
SHY1YGR112W BUD27P43573 796 aaKnown RBP RIP-Chip data11.75□□□□□ -0.53not detected
SHY1YGR112W APC1P53886 1748 aa11.74□□□□□ -0.53
SHY1YGR112W YRF1-4O13559 1382 aa11.74□□□□□ -0.53
SHY1YGR112W YRF1-2P40105 1681 aa11.73□□□□□ -0.53
SHY1YGR112W DSD1P53095 428 aa11.72□□□□□ -0.53
SHY1YGR112W YIL177CP40434 1758 aa11.72□□□□□ -0.53
SHY1YGR112W YJL225CP40889 1758 aa11.72□□□□□ -0.53
SHY1YGR112W RRP5Q05022 1729 aaKnown RBP11.72□□□□□ -0.53
SHY1YGR112W MAK21Q12176 1025 aaKnown RBP11.71□□□□□ -0.53
SHY1YGR112W YNL050CP53952 270 aa11.7□□□□□ -0.54
SHY1YGR112W POL32P47110 350 aa11.69□□□□□ -0.54
SHY1YGR112W NTH2P35172 780 aa11.68□□□□□ -0.54
SHY1YGR112W PRP5P21372 849 aaPredicted RBP11.67□□□□□ -0.54
SHY1YGR112W GYP7P48365 746 aa11.67□□□□□ -0.54
SHY1YGR112W RRT14P40470 206 aa11.66□□□□□ -0.54
SHY1YGR112W ZDS1P50111 915 aaKnown RBP11.66□□□□□ -0.54
SHY1YGR112W PRP45P28004 379 aaPredicted RBP11.64□□□□□ -0.55
SHY1YGR112W HSP104P31539 908 aaKnown RBP11.64□□□□□ -0.55
SHY1YGR112W MAM1P40065 302 aa11.64□□□□□ -0.55
SHY1YGR112W PUF6Q04373 656 aaKnown RBP11.64□□□□□ -0.55
SHY1YGR112W SLM3Q12093 417 aa11.64□□□□□ -0.55
SHY1YGR112W URB1P34241 1764 aaKnown RBP11.63□□□□□ -0.55
SHY1YGR112W FKS3Q04952 1785 aa11.62□□□□□ -0.55
SHY1YGR112W MSB3P48566 633 aaPredicted RBP11.62□□□□□ -0.55
SHY1YGR112W YBR287WP38355 427 aa11.61□□□□□ -0.55
SHY1YGR112W SRT1Q03175 343 aa11.61□□□□□ -0.55
SHY1YGR112W AOS1Q06624 347 aa11.61□□□□□ -0.55
SHY1YGR112W TRP5P00931 707 aaKnown RBP11.6□□□□□ -0.55
SHY1YGR112W PTP3P40048 928 aa11.6□□□□□ -0.55
SHY1YGR112W OPY1P38271 328 aa11.59□□□□□ -0.55
SHY1YGR112W CTF4Q01454 927 aa11.59□□□□□ -0.55
SHY1YGR112W EDE1P34216 1381 aa11.58□□□□□ -0.56
SHY1YGR112W BMS1Q08965 1183 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms